; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G014730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G014730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionubiquitin-conjugating enzyme E2 4-like
Genome locationCmo_Chr02:8643763..8644568
RNA-Seq ExpressionCmoCh02G014730
SyntenyCmoCh02G014730
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5538353.1 hypothetical protein RHGRI_019065 [Rhododendron griersonianum]6.7e-3657.5Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVE IND MQEFYV F+GP DSKSS P                                    Y++ +  S +       
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSL
          G     RVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFG ++ L
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSL

KAG7016977.1 Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3558.6Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                      L   G                            VW 
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGK
                +VELPDAYPYKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFG K
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGK

KAG7036029.1 Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3559.09Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

XP_022958690.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata]5.7e-3559.09Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

XP_022996146.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima]5.7e-3559.09Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

TrEMBL top hitse value%identityAlignment
A0A0A0KNV9 UBC core domain-containing protein3.6e-3558.44Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

A0A1S3AUA7 ubiquitin-conjugating enzyme E2 4-like3.6e-3558.44Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

A0A5A7THI1 Ubiquitin-conjugating enzyme E2 4-like isoform X13.6e-3558.44Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

A0A6J1H475 ubiquitin-conjugating enzyme E2 4-like2.7e-3559.09Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

A0A6J1K3W2 ubiquitin-conjugating enzyme E2 4-like2.7e-3559.09Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

SwissProt top hitse value%identityAlignment
P16577 Ubiquitin-conjugating enzyme E2-23 kDa2.1e-3252.6Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKV+ IND M EF+V FHGPKDS                             ++Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVEL +AYPYKSPSIGF NKIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

P42748 Ubiquitin-conjugating enzyme E2 47.7e-3554.55Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPS+GFI KIYHPNVDE+SGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

P42749 Ubiquitin-conjugating enzyme E2 51.4e-3354.55Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS     I++                                               VW 
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
                RVELPDAYPYKSPS+GFI KIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

P42750 Ubiquitin-conjugating enzyme E2 61.0e-3149.35Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     +VELP+AYPYKSPS+GF+NKIYHPNVDE SG+VCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

Q9P7R4 Ubiquitin-conjugating enzyme E2 82.9e-2642.86Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSP +R E D+MKL+MSDY+V  +ND+MQEFYV FHGP ++  S  I+                                                   
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
                 VELP  YP+KSPSIGF+N+I+HPN+DE+SGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

Arabidopsis top hitse value%identityAlignment
AT1G63800.1 ubiquitin-conjugating enzyme 51.0e-3454.55Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS     I++                                               VW 
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
                RVELPDAYPYKSPS+GFI KIYHPNVDEMSGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

AT2G46030.1 ubiquitin-conjugating enzyme 67.4e-3349.35Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     +VELP+AYPYKSPS+GF+NKIYHPNVDE SG+VCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

AT5G41340.1 ubiquitin conjugating enzyme 45.5e-3654.55Show/hide
Query:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF
        MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDS                             L+Q                          
Subjt:  MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWF

Query:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF
          G     RVELPDAYPYKSPS+GFI KIYHPNVDE+SGSVCLDVINQTWSPMF
Subjt:  EIGRSLPRRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF

AT5G50870.1 ubiquitin-conjugating enzyme 275.1e-1040.38Show/hide
Query:  VELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSLL
        + +PD YP++ P + F  K++HPN+   SG++CLD++   WSP    KT+L+
Subjt:  VELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSLL

AT5G50870.2 ubiquitin-conjugating enzyme 275.1e-1040.38Show/hide
Query:  VELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSLL
        + +PD YP++ P + F  K++HPN+   SG++CLD++   WSP    KT+L+
Subjt:  VELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCCAGCAAGCGACGCGAAATGGATTTGATGAAACTGATGATGAGTGATTACAAGGTGGAAACCATCAATGATAGCATGCAAGAGTTCTATGTCGACTTCCA
TGGTCCTAAAGACAGTAAATCATCTATACCCATCTTTGATTTCTCTATTTTCTTTGCTTTTTTACTAATTCCTCATCTTCTACTGCGCCCTTCTGGATTTCCCCTTTTTC
AGACTGTTCTGTGCAATATGATTTTGGGTTATATGGATTATCTGATCTTATCCCTTTTTCTTTGTTTGCTTGTTTGGTTTGAAATCGGAAGGTCTTTACCAAGGAGGGTG
GAGTTGCCAGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTCATCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAA
CCAGACATGGAGCCCTATGTTTGGTGGGAAAACATCCCTACTCTTATCTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCCAGCAAGCGACGCGAAATGGATTTGATGAAACTGATGATGAGTGATTACAAGGTGGAAACCATCAATGATAGCATGCAAGAGTTCTATGTCGACTTCCA
TGGTCCTAAAGACAGTAAATCATCTATACCCATCTTTGATTTCTCTATTTTCTTTGCTTTTTTACTAATTCCTCATCTTCTACTGCGCCCTTCTGGATTTCCCCTTTTTC
AGACTGTTCTGTGCAATATGATTTTGGGTTATATGGATTATCTGATCTTATCCCTTTTTCTTTGTTTGCTTGTTTGGTTTGAAATCGGAAGGTCTTTACCAAGGAGGGTG
GAGTTGCCAGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTCATCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAA
CCAGACATGGAGCCCTATGTTTGGTGGGAAAACATCCCTACTCTTATCTTTGTAG
Protein sequenceShow/hide protein sequence
MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSKSSIPIFDFSIFFAFLLIPHLLLRPSGFPLFQTVLCNMILGYMDYLILSLFLCLLVWFEIGRSLPRRV
ELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFGGKTSLLLSL