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CmoCh02G014740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G014740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin-conjugating enzyme, E2
Genome locationCmo_Chr02:8644617..8645948
RNA-Seq ExpressionCmoCh02G014740
SyntenyCmoCh02G014740
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036029.1 Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-3798.84Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS+DEEMAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

XP_004143895.1 ubiquitin-conjugating enzyme E2 4 [Cucumis sativus]2.7e-3391.86Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

XP_022159827.1 ubiquitin-conjugating enzyme E2 4-like [Momordica charantia]2.1e-3390.7Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+Y+S DE+MAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

XP_022958690.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata]1.4e-37100Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

XP_022996146.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima]4.1e-3798.84Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

TrEMBL top hitse value%identityAlignment
A0A0A0KNV9 UBC core domain-containing protein1.3e-3391.86Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

A0A5A7THI1 Ubiquitin-conjugating enzyme E2 4-like isoform X11.3e-3391.86Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

A0A6J1E0W4 ubiquitin-conjugating enzyme E2 4-like1.0e-3390.7Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+Y+S DE+MAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

A0A6J1H475 ubiquitin-conjugating enzyme E2 4-like6.8e-38100Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

A0A6J1K3W2 ubiquitin-conjugating enzyme E2 4-like2.0e-3798.84Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

SwissProt top hitse value%identityAlignment
P16577 Ubiquitin-conjugating enzyme E2-23 kDa4.4e-2672.09Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDE-YSSDDEEMAGQAD
        DLVN+FEVFLPQLLLYPNPSDPLNGEAA++MMRD+ AYE +VKEYCE+YAKPEDI    EE+ SDEE+S+ E Y S DE + G AD
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDE-YSSDDEEMAGQAD

P42748 Ubiquitin-conjugating enzyme E2 43.1e-2781.01Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEE
        DLVNVFE FLPQLLLYPNPSDPLNGEAAA+MMRDR AYEQRVKEYCEKYAKP   G   E+KSSDEE+SE+EY SD+E+
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEE

P42749 Ubiquitin-conjugating enzyme E2 54.9e-2572.22Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS-----DDEEMAGQAD
        DLVNVFE FLPQLLLYPNPSDPLNGEAAA+MMRDR  YEQRVKEYCEKYAKP       EE SSD+E+SEDEY+S     DD  +AG+ D
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS-----DDEEMAGQAD

P42750 Ubiquitin-conjugating enzyme E2 67.8e-2364.71Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQAD
        DL+NVFE FLPQLLLYPNPSDP NGEAA+++MRDRAAYE +VKEYCEKYAKPE+I    ++  S  E   D    DD+E+ G+AD
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQAD

Q9P7R4 Ubiquitin-conjugating enzyme E2 85.6e-1347.67Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA
        D++N+FEVFLPQLL YPN SDPLNGEAAA+++R+   Y  +V++Y  +YA  ED      + S D+ +S  +  S D E+AG  D+
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

Arabidopsis top hitse value%identityAlignment
AT1G63800.1 ubiquitin-conjugating enzyme 53.5e-2672.22Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS-----DDEEMAGQAD
        DLVNVFE FLPQLLLYPNPSDPLNGEAAA+MMRDR  YEQRVKEYCEKYAKP       EE SSD+E+SEDEY+S     DD  +AG+ D
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS-----DDEEMAGQAD

AT2G46030.1 ubiquitin-conjugating enzyme 65.5e-2464.71Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQAD
        DL+NVFE FLPQLLLYPNPSDP NGEAA+++MRDRAAYE +VKEYCEKYAKPE+I    ++  S  E   D    DD+E+ G+AD
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQAD

AT5G41340.1 ubiquitin conjugating enzyme 42.2e-2881.01Show/hide
Query:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEE
        DLVNVFE FLPQLLLYPNPSDPLNGEAAA+MMRDR AYEQRVKEYCEKYAKP   G   E+KSSDEE+SE+EY SD+E+
Subjt:  DLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTTGTTTGTGGAATTACAATGCTGCGACCGAGGAATTGCGATCTAATTCGGGTGTTTTTTGTTGTATAGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACA
ACTTCTCCTGTATCCCAACCCGTCGGACCCGTTGAATGGCGAAGCTGCTGCAGTAATGATGCGTGATCGCGCTGCATATGAGCAAAGAGTAAAAGAATACTGTGAGAAAT
ATGCAAAGCCAGAGGACATTGGAGGTGTTGGTGAGGAGAAATCCAGTGATGAAGAGGTGAGTGAAGATGAGTACTCCTCAGATGATGAGGAGATGGCAGGCCAAGCTGAT
GCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTTGTTTGTGGAATTACAATGCTGCGACCGAGGAATTGCGATCTAATTCGGGTGTTTTTTGTTGTATAGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACA
ACTTCTCCTGTATCCCAACCCGTCGGACCCGTTGAATGGCGAAGCTGCTGCAGTAATGATGCGTGATCGCGCTGCATATGAGCAAAGAGTAAAAGAATACTGTGAGAAAT
ATGCAAAGCCAGAGGACATTGGAGGTGTTGGTGAGGAGAAATCCAGTGATGAAGAGGTGAGTGAAGATGAGTACTCCTCAGATGATGAGGAGATGGCAGGCCAAGCTGAT
GCTTGACTGGAAGGAAAACCATATCAACCCTCTTCTGTACATGATTCAAAAACTGGGTTACCATCAAAATTGAAAGCTATGGAGAAGGTTCCTAGCTCCTCTACTGTCTC
TTATTTTCATGATAGTTGTTGTGTACATTAATCAAACTATGATATAATGTTTCATATATTGTCATTTACCATTTAATCTATAAACCAATTCTCTTGGGTTTTCTCCTTTT
TCTCAACAGTTTCACGGTCTCTCCATCTCTAACGCAACGTTAGGGATGTAAGTGAGTCGGGTTGGTTCGGATATGGAGTAAAGCTCCGGTTGGAAGCTCCTGTATTCATT
TTAAAAACTGAATTTTGTGCTACTGTACTTGGGTATTTCGAAAGCCCCGGTCGTGTTGTGTTGTGTTATATTCGGTTTTGATTTACAGTACGTACCAACCGGACCATGTT
TAATAGGGAAATAATATGATTGAAGCAAATGGATGGCCTAAAGTGCTTAAGATATCCC
Protein sequenceShow/hide protein sequence
MVFCLWNYNAATEELRSNSGVFCCIDLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQAD
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