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CmoCh02G014800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G014800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin efflux carrier family protein
Genome locationCmo_Chr02:8663124..8663563
RNA-Seq ExpressionCmoCh02G014800
SyntenyCmoCh02G014800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN26214.1 unknown [Zea mays]3.5e-1648.67Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +VIP ++ VVDD S Q PG VDAGA   D                 + D+RV+G++LG+GGGED VDE+EGA+DL  +A ALGVA    VG A + HV+G
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +   ADG
Subjt:  LLEALHDAGTADG

ACN27739.1 unknown [Zea mays]1.9e-1447.79Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +V+P ++ VVDD  +Q P  VDAGA   D                 +RDV V+G +LG+GGGED VDE+EGA+DL  +A ALGVA    VG A + HV G
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +A  ADG
Subjt:  LLEALHDAGTADG

ACR37658.1 unknown [Zea mays]1.9e-1447.79Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +V+P ++ VVDD  +Q P  VDAGA   D                 +RDV V+G +LG+GGGED VDE+EGA+DL  +A ALGVA    VG A + HV G
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +A  ADG
Subjt:  LLEALHDAGTADG

KAB8096440.1 hypothetical protein EE612_024891, partial [Oryza sativa]4.7e-1349.52Show/hide
Query:  VDDGSTQTPGWVDAGAVFDD-----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDGLLEALHDA
        V+DGS + P WVDAGA   D                 + R+V V G+ LG+GGGED VDE+EGA+DL A+A ALGVA   +VG A    V  LLEAL DA
Subjt:  VDDGSTQTPGWVDAGAVFDD-----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDGLLEALHDA

Query:  GTADG
        G  DG
Subjt:  GTADG

KRY05558.1 hypothetical protein T12_13101, partial [Trichinella patagoniensis]1.2e-1346.02Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +VIPSV PVVD+GS++ PGWVDA     D                  R++R+S ISLGI   ED V+E++GA++LS+K  AL V+R H VG + + HV  
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +AGT  G
Subjt:  LLEALHDAGTADG

TrEMBL top hitse value%identityAlignment
A0A0E0DH09 Uncharacterized protein6.1e-1455.32Show/hide
Query:  PSVLPVVDDGSTQTPGWVDAGAVFDDSYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDGLLEALHDAGTADG
        P +  VVDDGS + P  VDAGA          V G+ LG+GGGED VDE+EGA+DL A+A ALGVA   +VG A    V  LLEAL DAG ADG
Subjt:  PSVLPVVDDGSTQTPGWVDAGAVFDDSYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDGLLEALHDAGTADG

A0A0V0YZF1 Uncharacterized protein (Fragment)6.1e-1446.02Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +VIPSV PVVD+GS++ PGWVDA     D                  R++R+S ISLGI   ED V+E++GA++LS+K  AL V+R H VG + + HV  
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +AGT  G
Subjt:  LLEALHDAGTADG

C0HGR1 Uncharacterized protein1.7e-1648.67Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +VIP ++ VVDD S Q PG VDAGA   D                 + D+RV+G++LG+GGGED VDE+EGA+DL  +A ALGVA    VG A + HV+G
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +   ADG
Subjt:  LLEALHDAGTADG

C0P423 Uncharacterized protein9.3e-1547.79Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +V+P ++ VVDD  +Q P  VDAGA   D                 +RDV V+G +LG+GGGED VDE+EGA+DL  +A ALGVA    VG A + HV G
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +A  ADG
Subjt:  LLEALHDAGTADG

C4J908 Uncharacterized protein9.3e-1547.79Show/hide
Query:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG
        +V+P ++ VVDD  +Q P  VDAGA   D                 +RDV V+G +LG+GGGED VDE+EGA+DL  +A ALGVA    VG A + HV G
Subjt:  MVIPSVLPVVDDGSTQTPGWVDAGAVFDD----------------SYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDG

Query:  LLEALHDAGTADG
         LEAL +A  ADG
Subjt:  LLEALHDAGTADG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATCCCAAGCGTGCTGCCTGTTGTAGATGATGGCAGCACCCAGACTCCGGGCTGGGTTGATGCCGGTGCCGTTTTTGATGATTCTTACAGGGACGTGAGAGTCTC
TGGCATTTCTCTTGGCATCGGTGGCGGAGAAGACAGTGTAGACGAGAACGAAGGTGCCAATGATCTCAGCGCCAAGGCCACTGCCCTTGGTGTAGCCAGAGGCCACGAAG
TTGGCACCGCCGAGCTTCTGCACGTAGATGGACTTCTCGAAGCCCTTCACGACGCCGGCACCGCAGATGGCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCATCCCAAGCGTGCTGCCTGTTGTAGATGATGGCAGCACCCAGACTCCGGGCTGGGTTGATGCCGGTGCCGTTTTTGATGATTCTTACAGGGACGTGAGAGTCTC
TGGCATTTCTCTTGGCATCGGTGGCGGAGAAGACAGTGTAGACGAGAACGAAGGTGCCAATGATCTCAGCGCCAAGGCCACTGCCCTTGGTGTAGCCAGAGGCCACGAAG
TTGGCACCGCCGAGCTTCTGCACGTAGATGGACTTCTCGAAGCCCTTCACGACGCCGGCACCGCAGATGGCACCTAG
Protein sequenceShow/hide protein sequence
MVIPSVLPVVDDGSTQTPGWVDAGAVFDDSYRDVRVSGISLGIGGGEDSVDENEGANDLSAKATALGVARGHEVGTAELLHVDGLLEALHDAGTADGT