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CmoCh02G015010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G015010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAmp-dependent synthetase and ligase
Genome locationCmo_Chr02:8762848..8763501
RNA-Seq ExpressionCmoCh02G015010
SyntenyCmoCh02G015010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
COW88608.1 Uncharacterised protein [Mycobacterium tuberculosis]3.6e-0541.46Show/hide
Query:  TNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFLYPFVTFGPLMHTSPLTPSGCITPFSSRIAI
        T S   F PPRLMSSL+RP   + P+  ++P SPV N P+ K A +  G   YP  T  P    SP  P+G  +P    I I
Subjt:  TNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFLYPFVTFGPLMHTSPLTPSGCITPFSSRIAI

GER47036.1 amp-dependent synthetase and ligase [Striga asiatica]4.7e-0535.16Show/hide
Query:  TFFGILKDARFFLQKRSTSASSIELPSL----GITAQLIC-------------RSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPN-
        TFFG +      LQ  + SASS    S     G++  L C                   T++ L F PP +++SL R     YPS    P SPV +HP+ 
Subjt:  TFFGILKDARFFLQKRSTSASSIELPSL----GITAQLIC-------------RSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPN-

Query:  -EKVALLASGLFLYPFVTFGPLMHTSPL
          K A +AS  F YPF+T  PL  TSP+
Subjt:  -EKVALLASGLFLYPFVTFGPLMHTSPL

OMJ26057.1 hypothetical protein AYI70_g481 [Smittium culicis]2.7e-0840.19Show/hide
Query:  STSASSIELPSLGITAQLICRSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKV-ALLASGLFLYPFVTFGPLMHTSP--LTPSG
        S   SS  +P   ++A   C S  L +++   + P  L+SSLI  T   + S S  P SPVW +P+  + +L+ASGLF YPF+TF PL H+SP   TPS 
Subjt:  STSASSIELPSLGITAQLICRSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKV-ALLASGLFLYPFVTFGPLMHTSP--LTPSG

Query:  CITPFSS
            F++
Subjt:  CITPFSS

TrEMBL top hitse value%identityAlignment
A0A0A9K6M5 Uncharacterized protein3.9e-0544.19Show/hide
Query:  MNTFFGILKDARFFLQKRSTSASSIELPSLGITAQLI--------------CRSIELETNSELN-----FVPPRLMSSLIRPTRCK
        MNTF G L  ARF  Q  +TS+S    PS GITAQLI              C +    +++E       F PPRLMSSL+RPTRC+
Subjt:  MNTFFGILKDARFFLQKRSTSASSIELPSLGITAQLI--------------CRSIELETNSELN-----FVPPRLMSSLIRPTRCK

A0A0A9SR26 Uncharacterized protein8.1e-1173.91Show/hide
Query:  FVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFL
        F PPRLMSSL+RPTRC+YPS S  P+SPVWNHPN   A  ASGLFL
Subjt:  FVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFL

A0A1R1YGL6 Uncharacterized protein1.3e-0840.19Show/hide
Query:  STSASSIELPSLGITAQLICRSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKV-ALLASGLFLYPFVTFGPLMHTSP--LTPSG
        S   SS  +P   ++A   C S  L +++   + P  L+SSLI  T   + S S  P SPVW +P+  + +L+ASGLF YPF+TF PL H+SP   TPS 
Subjt:  STSASSIELPSLGITAQLICRSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKV-ALLASGLFLYPFVTFGPLMHTSP--LTPSG

Query:  CITPFSS
            F++
Subjt:  CITPFSS

A0A5A7QPY8 Amp-dependent synthetase and ligase2.3e-0535.16Show/hide
Query:  TFFGILKDARFFLQKRSTSASSIELPSL----GITAQLIC-------------RSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPN-
        TFFG +      LQ  + SASS    S     G++  L C                   T++ L F PP +++SL R     YPS    P SPV +HP+ 
Subjt:  TFFGILKDARFFLQKRSTSASSIELPSL----GITAQLIC-------------RSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPN-

Query:  -EKVALLASGLFLYPFVTFGPLMHTSPL
          K A +AS  F YPF+T  PL  TSP+
Subjt:  -EKVALLASGLFLYPFVTFGPLMHTSPL

A0A655JGA6 Uncharacterized protein1.8e-0541.46Show/hide
Query:  TNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFLYPFVTFGPLMHTSPLTPSGCITPFSSRIAI
        T S   F PPRLMSSL+RP   + P+  ++P SPV N P+ K A +  G   YP  T  P    SP  P+G  +P    I I
Subjt:  TNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFLYPFVTFGPLMHTSPLTPSGCITPFSSRIAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCTTCTTCGGAATCTTGAAGGACGCAAGGTTTTTCTTGCAAAAGCGCAGCACCTCCGCTTCGTCGATCGAGCTTCCCTCCCTCGGAATTACGGCGCAATTGAT
CTGCCGAAGCATCGAGTTAGAAACTAATTCTGAGTTGAATTTTGTACCTCCACGGTTAATGAGCTCCTTGATCCGGCCGACGAGATGCAAGTATCCGTCGGAGTCGAAGA
ACCCGATATCGCCGGTGTGGAACCATCCGAATGAGAAGGTGGCCTTGTTAGCCTCTGGATTGTTTTTGTATCCCTTCGTTACATTTGGTCCTCTAATGCACACTTCTCCT
TTAACACCTTCCGGTTGTATCACGCCGTTTTCATCCAGAATCGCCATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACCTTCTTCGGAATCTTGAAGGACGCAAGGTTTTTCTTGCAAAAGCGCAGCACCTCCGCTTCGTCGATCGAGCTTCCCTCCCTCGGAATTACGGCGCAATTGAT
CTGCCGAAGCATCGAGTTAGAAACTAATTCTGAGTTGAATTTTGTACCTCCACGGTTAATGAGCTCCTTGATCCGGCCGACGAGATGCAAGTATCCGTCGGAGTCGAAGA
ACCCGATATCGCCGGTGTGGAACCATCCGAATGAGAAGGTGGCCTTGTTAGCCTCTGGATTGTTTTTGTATCCCTTCGTTACATTTGGTCCTCTAATGCACACTTCTCCT
TTAACACCTTCCGGTTGTATCACGCCGTTTTCATCCAGAATCGCCATTTCTTGA
Protein sequenceShow/hide protein sequence
MNTFFGILKDARFFLQKRSTSASSIELPSLGITAQLICRSIELETNSELNFVPPRLMSSLIRPTRCKYPSESKNPISPVWNHPNEKVALLASGLFLYPFVTFGPLMHTSP
LTPSGCITPFSSRIAIS