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CmoCh02G015100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G015100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box/LRR-repeat protein
Genome locationCmo_Chr02:8816905..8817147
RNA-Seq ExpressionCmoCh02G015100
SyntenyCmoCh02G015100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]4.3e-1256.47Show/hide
Query:  MASPNPNSSFLLLFLVTILLTTASLSA-----ADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN
        MAS N     L LFL  ILLTT  L A     A   QP NDSL+PPT++TFS  + P AV+D I  + + VSLRKVPAGPNPLHN
Subjt:  MASPNPNSSFLLLFLVTILLTTASLSA-----ADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]3.4e-0954.12Show/hide
Query:  MASPNPNSSFLLLFLVTILLTTASLSA-----ADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN
        MAS NP +S  L   + +L TTA LSA        Q P NDSL PPT+S FS  + P  VE+  A Q +AVS RKVPAGPNPLHN
Subjt:  MASPNPNSSFLLLFLVTILLTTASLSA-----ADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2897.3Show/hide
Query:  MASPNPNSSFLLLFLVTILLTTASLSAADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAG
        MASPNPNSSFLLLFLVTILLTTASLSAAD QQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQ HAVSLRKVPAG
Subjt:  MASPNPNSSFLLLFLVTILLTTASLSAADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]8.1e-1156.67Show/hide
Query:  MASPN---PNSSFLLLFLVTILLTTASLSAA-----DTQQPPND--SLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN
        MAS N   PNS FL LF++ +L TT  L AA        QP ND  SL PPT+STFS  + P AVED I  + + VSLRKVPAGPNPLHN
Subjt:  MASPN---PNSSFLLLFLVTILLTTASLSAA-----DTQQPPND--SLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein3.9e-1156.67Show/hide
Query:  MASPN---PNSSFLLLFLVTILLTTASLSAA-----DTQQPPND--SLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN
        MAS N   PNS FL LF++ +L TT  L AA        QP ND  SL PPT+STFS  + P AVED I  + + VSLRKVPAGPNPLHN
Subjt:  MASPN---PNSSFLLLFLVTILLTTASLSAA-----DTQQPPND--SLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein2.1e-1256.47Show/hide
Query:  MASPNPNSSFLLLFLVTILLTTASLSA-----ADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN
        MAS N     L LFL  ILLTT  L A     A   QP NDSL+PPT++TFS  + P AV+D I  + + VSLRKVPAGPNPLHN
Subjt:  MASPNPNSSFLLLFLVTILLTTASLSA-----ADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCCAAACCCCAATTCCTCCTTCCTCCTCCTCTTCCTCGTCACAATTCTCCTCACCACCGCCTCTCTCTCCGCCGCCGACACACAACAACCGCCGAATGATTC
TCTCCAACCACCTACCTCTTCAACATTTTCACTCCCAAAGTCGCCGCCCGCCGTCGAGGACGTCATCGCACCCCAATACCACGCCGTTTCACTCCGCAAAGTCCCCGCCG
GTCCAAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCCAAACCCCAATTCCTCCTTCCTCCTCCTCTTCCTCGTCACAATTCTCCTCACCACCGCCTCTCTCTCCGCCGCCGACACACAACAACCGCCGAATGATTC
TCTCCAACCACCTACCTCTTCAACATTTTCACTCCCAAAGTCGCCGCCCGCCGTCGAGGACGTCATCGCACCCCAATACCACGCCGTTTCACTCCGCAAAGTCCCCGCCG
GTCCAAACCCACTTCATAACTAA
Protein sequenceShow/hide protein sequence
MASPNPNSSFLLLFLVTILLTTASLSAADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN