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CmoCh02G015440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G015440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF1442)
Genome locationCmo_Chr02:8952538..8953637
RNA-Seq ExpressionCmoCh02G015440
SyntenyCmoCh02G015440
Gene Ontology termsNA
InterPro domainsIPR009902 - Protein of unknown function DUF1442


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022958256.1 uncharacterized protein LOC111459536 isoform X1 [Cucurbita moschata]7.9e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

XP_022958258.1 uncharacterized protein LOC111459536 isoform X2 [Cucurbita moschata]7.9e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

XP_022996438.1 uncharacterized protein LOC111491663 isoform X1 [Cucurbita maxima]7.9e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

XP_023516665.1 uncharacterized protein LOC111780476, partial [Cucurbita pepo subsp. pepo]7.9e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

XP_023533857.1 uncharacterized protein LOC111795581 isoform X1 [Cucurbita pepo subsp. pepo]7.9e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

TrEMBL top hitse value%identityAlignment
A0A6J1H1M1 uncharacterized protein LOC111459536 isoform X13.8e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

A0A6J1H2M9 uncharacterized protein LOC111459536 isoform X23.8e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

A0A6J1I4U3 uncharacterized protein LOC111469161 isoform X24.8e-3488.37Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        +ANLSSRGAVLICKNANSRSDSSFRW NVT+NGTRRL+RS FLPVG+GLDIA+VAA G NSGSGEGKGKWIK VDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

A0A6J1K8Q6 uncharacterized protein LOC111491663 isoform X23.8e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

A0A6J1KAR9 uncharacterized protein LOC111491663 isoform X13.8e-39100Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12320.1 Protein of unknown function (DUF1442)6.9e-0944.58Show/hide
Query:  ANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSG-SGEGKGKWIKQVDRRSGEEFV
        A   +RGAV++C+N  S      R         R+++R+  LPV  G++IA+VAA  RNSG SG  K +WI  VD+RSGEE V
Subjt:  ANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSG-SGEGKGKWIKQVDRRSGEEFV

AT1G62840.1 Protein of unknown function (DUF1442)7.9e-1347.73Show/hide
Query:  ANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGE---GKGKWIKQVDRRSGEEFVIRK
        A   SRGAV++C++   RS S F W+   ++  R ++R+  LPV  GL+IA+VAA  R+SG  +    K KWIK  D+RSGEE VIRK
Subjt:  ANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGE---GKGKWIKQVDRRSGEEFVIRK

AT2G45360.1 Protein of unknown function (DUF1442)1.2e-1651.76Show/hide
Query:  ANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        A LS++GAVL+CKNA  R+ S F+W +V   GT R++RS FLPVG GLDI +V A GR   S   + +WI+ VD  SGEE + R+
Subjt:  ANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

AT3G60780.1 Protein of unknown function (DUF1442)1.3e-1545.35Show/hide
Query:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
        +A  S  GAVL+CKNA  +S   F+W  +   GT R++RS FLPVG+GL+I +V A G  +G  +   +WIK +D RSGEE + ++
Subjt:  MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATCTGAGTTCCAGAGGAGCGGTTTTGATCTGCAAGAACGCGAACTCGAGAAGCGATTCGAGTTTCAGATGGAGTAATGTTACCAATAACGGAACGCGGCGGCT
GATTCGATCAGCGTTTTTGCCGGTGGGGCAGGGATTGGATATTGCATACGTGGCGGCGGAAGGAAGGAATTCAGGTTCCGGCGAGGGGAAGGGGAAATGGATCAAGCAGG
TTGATCGACGATCAGGGGAGGAGTTTGTGATTCGGAAGTTGGGTAACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATCTGAGTTCCAGAGGAGCGGTTTTGATCTGCAAGAACGCGAACTCGAGAAGCGATTCGAGTTTCAGATGGAGTAATGTTACCAATAACGGAACGCGGCGGCT
GATTCGATCAGCGTTTTTGCCGGTGGGGCAGGGATTGGATATTGCATACGTGGCGGCGGAAGGAAGGAATTCAGGTTCCGGCGAGGGGAAGGGGAAATGGATCAAGCAGG
TTGATCGACGATCAGGGGAGGAGTTTGTGATTCGGAAGTTGGGTAACTTTTAA
Protein sequenceShow/hide protein sequence
MANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRKLGNF