CuGenDBv2

Gene ID	CmoCh02G015580
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein LITTLE ZIPPER like
Genome location	Cmo_Chr02:9026753..9027552
RNA-Seq Expression	CmoCh02G015580
Synteny	CmoCh02G015580
Gene Ontology terms	NA
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-31

82.47

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCI ATQ ILFHQI TSKN+RR KRSKLQV RL+RRR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-41

98.98

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRL-SRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCITATQRILFHQIHTSKNRRRLKRSKLQVQRL SRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRL-SRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

XP_022159679.1 protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]

2.7e-32

84.21

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL+RRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]

5.9e-32

83.51

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCI+ATQ ILFHQI TSKNRRR KRSKLQV RL+RRR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]

4.4e-43

100

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKF8 Uncharacterized protein

2.0e-30

79.38

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MC++ATQ +LFH I +SKNRR  KRS  QV RL+RRR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

A0A2R6Q867 Protein LITTLE ZIPPER like

6.6e-21

64.58

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRR-RSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI++T+RI    +     ++R KRSK++VQRL+RR R  EEK GKD+ELKNL+LY EN TI+EENEKLR+KA++LHQENLALMTEF KKF HFD+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRR-RSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X2

1.4e-31

84.38

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRL-SRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL SRRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRL-SRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X1

1.3e-32

84.21

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL+RRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

A0A6J1E3C5 protein LITTLE ZIPPER 1-like

2.9e-32

83.51

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCI+ATQ ILFHQI TSKNRRR KRSKLQV RL+RRR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

SwissProt top hits

e value

%identity

Alignment

F4IG60 Protein LITTLE ZIPPER 1

1.5e-06

49.23

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Query:  RSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK
        +S +++ RLSRRR    ++ K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +    K
Subjt:  RSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK

Q9LZX5 Protein LITTLE ZIPPER 2

3.1e-07

42.5

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Query:  FHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF
        +H  H SK      ++ L++  L+RRR   ++Q K++E++NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  FHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

1.1e-07

49.23

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Query:  RSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK
        +S +++ RLSRRR    ++ K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +    K
Subjt:  RSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK

AT3G60890.1 protein binding

2.2e-08

42.5

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Query:  FHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF
        +H  H SK      ++ L++  L+RRR   ++Q K++E++NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  FHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF

AT3G60890.2 protein binding

2.8e-08

41.25

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Query:  FHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF
        +H  H SK      ++ L++  L+ RR    K+ K++E++NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  FHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF

Sequences

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CDS sequence

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ATGTGCATCACTGCAACACAACGCATTCTGTTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTAAAAAGGTCCAAACTTCAAGTTCAGAGGCTTTCCAGAAGGAG
ATCATTTGAAGAGAAGCAGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATTTGGAGAACCAAACTATAATTGAAGAGAATGAGAAGCTGAGGGAGAAAGCTAATA
TCCTTCATCAAGAGAACTTGGCTTTAATGACTGAGTTTCACAAAAAATTCCCACATTTTGATCAGAGAAAATGA

mRNA sequence

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CCATTATTATCACTACAATTTGCTTTCACCTCTCTTTCCCGTGAGTCTACACCCTCTATATAAGTATGAGCTTTAGTCCCACACATTCCCCTGCAACTTCCACACTTTAT
TCTGCTACAAAGGAAACCAAAAGCTAAGAAGCTGCATAGAAGAATAATGTGCATCACTGCAACACAACGCATTCTGTTTCATCAAATCCATACTTCCAAGAACAGGAGAC
GTTTAAAAAGGTCCAAACTTCAAGTTCAGAGGCTTTCCAGAAGGAGATCATTTGAAGAGAAGCAGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATTTGGAGAAC
CAAACTATAATTGAAGAGAATGAGAAGCTGAGGGAGAAAGCTAATATCCTTCATCAAGAGAACTTGGCTTTAATGACTGAGTTTCACAAAAAATTCCCACATTTTGATCA
GAGAAAATGATGGGATTCATCAGAGGGTGACATGGTTTTATCTCTTCCTTTCTTAATGTATTCGACTCTTTATTCAATATATGTGTGCACTTTGTCAAGAACACAAACTA
GAGAATCTTGAAATGGAATCAGATCATAAGAACACAAGCTACAGAACAAAAATGATATAGGATCAAGATATCAACAATGTTCAACTCTAGCTCTTTGGCATATGTTTGCT
TCAATCAAGTAAAAGGAGAGAATGGTTATGATTCAAACATGCTTATGGC

Protein sequence

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MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

CmoCh02G015580 (gene) of Cucurbita moschata (Rifu) v1 genome