CuGenDBv2

Gene ID	CmoCh02G015600
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Aminotran_1_2 domain-containing protein
Genome location	Cmo_Chr02:9028909..9029413
RNA-Seq Expression	CmoCh02G015600
Synteny	CmoCh02G015600
Gene Ontology terms	GO:0006520 - cellular amino acid metabolic process (biological process) GO:0009058 - biosynthetic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004069 - L-aspartate:2-oxoglutarate aminotransferase activity (molecular function) GO:0008793 - aromatic-amino-acid:2-oxoglutarate aminotransferase activity (molecular function) GO:0016829 - lyase activity (molecular function) GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606155.1 putative aminotransferase ACS10, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-17

95.92

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

KAG7036100.1 putative aminotransferase ACS10, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-17

95.92

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

XP_022957673.1 probable aminotransferase ACS10 [Cucurbita moschata]

1.6e-17

95.92

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

XP_022996282.1 probable aminotransferase ACS10 [Cucurbita maxima]

1.5e-15

89.8

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS+DLVQNWL ENGRDAILG GNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

XP_023532648.1 probable aminotransferase ACS10 [Cucurbita pepo subsp. pepo]

4.8e-17

93.88

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS+DLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMR4 Aminotran_1_2 domain-containing protein

1.6e-13

85.71

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS+DLVQNWL ENGRDAILGV NHNELSVAGTV YQPSDGL DLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

A0A6J1E6K3 probable aminotransferase ACS10

3.1e-14

83.67

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS+DLVQNWL ENGRDAI G GNHNELSVAGTV YQPSDGL DLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

A0A6J1H0W9 probable aminotransferase ACS10

8.0e-18

95.92

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

A0A6J1I209 probable aminotransferase ACS10

8.2e-15

85.71

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS+DLVQNWL ENGRDAI G GNHNELSVAGTVSYQPSDGL DLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

A0A6J1K1G9 probable aminotransferase ACS10

7.5e-16

89.8

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS+DLVQNWL ENGRDAILG GNHNELSVAGTVSYQPSDGLMDLKL +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G62960.1 ACC synthase 10

2.2e-04

42.86

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Query:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI
        KLS D   +W++EN ++AI      + LS++G  SY+PSDGL++LK+ +
Subjt:  KLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVI

Sequences

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CDS sequence

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ATGAAGTTGTCGACGGACTTGGTGCAAAATTGGCTAGTGGAGAATGGAAGGGATGCCATATTAGGAGTAGGGAATCATAATGAGCTGAGTGTAGCGGGGACTGTTAGCTA
CCAGCCTTCAGATGGATTGATGGATTTGAAACTGGTAATCAAATTTCCTTGTCTTTTCTCTGTAATTAATATTTTGGAATCAGTTGGGTTGCCCCTTGCCTGTATGAAGA
AGTTTGAACGGCTCTGTTTTTTGTTCTCTTGTACATGCTTGGATTTGTGTTCTCTGCTACAAAAGATTAAATTTAGTCAGGGTAATGCAAATTTTGTGAATGAAGTGGTG
AGATCTCAATGA

mRNA sequence

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Protein sequence

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MKLSTDLVQNWLVENGRDAILGVGNHNELSVAGTVSYQPSDGLMDLKLVIKFPCLFSVINILESVGLPLACMKKFERLCFLFSCTCLDLCSLLQKIKFSQGNANFVNEVV
RSQ

CmoCh02G015600 (gene) of Cucurbita moschata (Rifu) v1 genome