CuGenDBv2

Gene ID	CmoCh02G015730
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Ribosomal protein L15
Genome location	Cmo_Chr02:9082668..9084619
RNA-Seq Expression	CmoCh02G015730
Synteny	CmoCh02G015730
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0006383 - transcription by RNA polymerase III (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR000439 - Ribosomal protein L15e IPR012678 - Ribosomal protein L23/L15e core domain superfamily IPR020925 - Ribosomal protein L15e, conserved site IPR024794 - Ribosomal protein L15e core domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004146916.1 60S ribosomal protein L15-1 [Cucumis sativus]

1.9e-110

92.27

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRV+NSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

XP_008437057.1 PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo]

5.5e-110

91.82

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNA+RNDPRI WICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

XP_022141052.1 60S ribosomal protein L15-2 [Momordica charantia]

4.2e-110

92.27

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

XP_022922395.1 60S ribosomal protein L15-2-like [Cucurbita moschata]

8.5e-111

92.73

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

XP_022996180.1 60S ribosomal protein L15-2 [Cucurbita maxima]

4.2e-110

92.27

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ+PSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU38 Ribosomal protein L15

9.1e-111

92.27

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRV+NSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

A0A6J1CIS0 Ribosomal protein L15

2.0e-110

92.27

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

A0A6J1H209 Ribosomal protein L15

4.1e-111

92.73

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

A0A6J1IBQ7 Ribosomal protein L15

4.1e-111

92.73

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

A0A6J1K617 Ribosomal protein L15

2.0e-110

92.27

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ+PSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

SwissProt top hits

e value

%identity

Alignment

O23515 60S ribosomal protein L15-1

8.0e-104

85.45

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+VVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRV+NSYW+NE                DSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH +HK 
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWK+NN+LSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

O65050 60S ribosomal protein L15-1

2.6e-102

83.18

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRV  P+RPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWIN                QDSTYKYYE+ILVD AH+A+R DPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL+HKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPS+RATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

O65082 60S ribosomal protein L15-2

3.6e-104

84.09

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+ HPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWIN                QDSTYKYYEV+LVD AH  +RNDPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL+HKA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPS+RATWKRNNTLSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

O82528 60S ribosomal protein L15

4.0e-103

85.45

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRV  PTRPDKARRLGYKAKQGYVVYRVRV+RGGRKRPVPKGIVYGKPTNQGVTQLKFQR+KRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRVLNSYWINE                DSTYKY+EVILVD AH A+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRG+GHLH+KA
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
         PSRRA WKRN TLSL RYR
Subjt:  RPSRRATWKRNNTLSLRRYR

Q8VYF1 60S ribosomal protein L15-2

1.4e-103

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+VVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRV+NSYW+NE                DSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH +HK 
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWK+NN++SLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

Arabidopsis top hits

e value

%identity

Alignment

AT4G16720.1 Ribosomal protein L23/L15e family protein

5.7e-105

85.45

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+VVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRV+NSYW+NE                DSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH +HK 
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWK+NN+LSLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

AT4G17390.1 Ribosomal protein L23/L15e family protein

9.7e-105

Show/hide

Query:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
        MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+VVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS
Subjt:  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRS

Query:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA
        VAEERAGRKLGGLRV+NSYW+NE                DSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH +HK 
Subjt:  VAEERAGRKLGGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA

Query:  RPSRRATWKRNNTLSLRRYR
        RPSRRATWK+NN++SLRRYR
Subjt:  RPSRRATWKRNNTLSLRRYR

Sequences

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CDS sequence

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ATGGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAGTCAGATGTGATGAGGTTCCTACAGAGGGTGAGATGCTGGGAGTATCGCCAGCATCCATCCATTGT
CCGCGTCAATCACCCCACTCGCCCTGATAAGGCTCGCCGTCTCGGCTACAAGGCCAAGCAGGGTTATGTTGTTTACAGAGTCCGTGTGAGGCGTGGTGGTAGGAAGAGGC
CAGTTCCCAAGGGTATTGTGTATGGAAAACCAACCAACCAGGGTGTTACCCAATTGAAGTTCCAGCGTAGCAAGAGATCAGTTGCAGAAGAACGAGCAGGACGAAAGTTG
GGTGGTCTGAGGGTTCTCAATTCATACTGGATCAACGAGGTCATTGATTATACCATACCTCCTTTCTATCTTCTCGTATTGACCCAAGATTCTACTTACAAGTACTATGA
GGTGATATTGGTTGATGTTGCCCACAATGCTGTTCGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTCCGAGGGCTTACATCCGCTG
GCAAGAAATACAGGGGACTCCGTGGAAAAGGACACTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAACAACACTCTTTCTCTTCGTCGTTACCGT
TGA

mRNA sequence

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TCTTTATATAAACTAGGGTTCTCCGGGCGAAAACCCTAGTTGGTGACTCCTCCCTGCAAGTTCTCTTTCCGATCCAATGGGGGCGTACAAGTACGTGTCGGAGCTATGGA
GGAAGAAGCAGTCAGATGTGATGAGGTTCCTACAGAGGGTGAGATGCTGGGAGTATCGCCAGCATCCATCCATTGTCCGCGTCAATCACCCCACTCGCCCTGATAAGGCT
CGCCGTCTCGGCTACAAGGCCAAGCAGGGTTATGTTGTTTACAGAGTCCGTGTGAGGCGTGGTGGTAGGAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGAAAACCAAC
CAACCAGGGTGTTACCCAATTGAAGTTCCAGCGTAGCAAGAGATCAGTTGCAGAAGAACGAGCAGGACGAAAGTTGGGTGGTCTGAGGGTTCTCAATTCATACTGGATCA
ACGAGGTCATTGATTATACCATACCTCCTTTCTATCTTCTCGTATTGACCCAAGATTCTACTTACAAGTACTATGAGGTGATATTGGTTGATGTTGCCCACAATGCTGTT
CGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTCCGAGGGCTTACATCCGCTGGCAAGAAATACAGGGGACTCCGTGGAAAAGGACA
CTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAACAACACTCTTTCTCTTCGTCGTTACCGTTGATTTTGGTTATGTTTCTCTATGTTTTGGTATC
CTTATTATCTGCTTCTGTTTGGAGAATTTAGTGGAAGATACTACTTCTATCTAGAATTTTTCCATCTTTATATTTACATCGAGAATTGTCAGGATTTTTCTAAACTAAGT
TATAATTTTGTTCATCGCACTATCTGTTTTTTAGATTTCATAACCATATAAGTTATAATTTTTCTAACTTTTTCT

Protein sequence

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MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKL
GGLRVLNSYWINEVIDYTIPPFYLLVLTQDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNTLSLRRYR

CmoCh02G015730 (gene) of Cucurbita moschata (Rifu) v1 genome