CuGenDBv2

Gene ID	CmoCh02G016310
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	MSC domain-containing protein
Genome location	Cmo_Chr02:9401143..9406378
RNA-Seq Expression	CmoCh02G016310
Synteny	CmoCh02G016310
Gene Ontology terms	GO:0005637 - nuclear inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR018996 - Man1/Src1, C-terminal IPR041885 - MAN1, winged-helix domain IPR044780 - Heh2/Src1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606225.1 hypothetical protein SDJN03_03542, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-229

99.75

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG

Query:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
        GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Subjt:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRM MGVNSDVIYSKMENELKAVVS
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

KAG7036172.1 hypothetical protein SDJN02_02973 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-226

98.22

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRL+TVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG

Query:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
        GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Subjt:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVV
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRM MGVNSDVIYSKMEN+ +A +
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVV

XP_022958028.1 uncharacterized protein LOC111459381 isoform X1 [Cucurbita moschata]

4.0e-228

99.49

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET

Query:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
        IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Subjt:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW

Query:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Subjt:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

XP_022958030.1 uncharacterized protein LOC111459381 isoform X3 [Cucurbita moschata]

1.2e-229

100

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG

Query:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
        GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Subjt:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

XP_023533382.1 uncharacterized protein LOC111795284 isoform X3 [Cucurbita pepo subsp. pepo]

5.8e-227

98.74

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNS+KGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET

Query:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
        IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Subjt:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW

Query:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRM MGVNSDVIYSKMENEL AVVS
Subjt:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1H1Y9 uncharacterized protein LOC111459381 isoform X1

1.9e-228

99.49

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET

Query:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
        IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Subjt:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW

Query:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Subjt:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

A0A6J1H2A7 uncharacterized protein LOC111459381 isoform X3

6.0e-230

100

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG

Query:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
        GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Subjt:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

A0A6J1H3U4 uncharacterized protein LOC111459381 isoform X2

1.4e-226

99.24

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
        CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL  SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET

Query:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
        IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Subjt:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW

Query:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ EGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
Subjt:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

A0A6J1K380 uncharacterized protein LOC111491297 isoform X1

2.9e-216

95.45

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTK+KHN NSDV  KRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET
        CPSHGECHEG LEC HGYREHGRLCIEDGVINKAVKKL  SEWLE HLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN DSDNTTIMYAKSKALET
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKL--SEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALET

Query:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
        IGGLFQAR+NALGIKELKCPDHLAESYKP TCRIRHWVLQHAF+VLPVSLLLVGCT LLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW
Subjt:  IGGLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESW

Query:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK KRLASKSS+RM MGVNSDVIYSKMENE KAVVS
Subjt:  VVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

A0A6J1K9D6 uncharacterized protein LOC111491297 isoform X3

9.0e-218

95.94

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        MSSTPKRRTK+KHN NSDV  KRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
        CPSHGECHEG LEC HGYREHGRLCIEDGVINKAVKKLSEWLE HLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVEN DSDNTTIMYAKSKALETIG
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG

Query:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
        GLFQAR+NALGIKELKCPDHLAESYKP TCRIRHWVLQHAF+VLPVSLLLVGCT LLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV
Subjt:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVV

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK KRLASKSS+RM MGVNSDVIYSKMENE KAVVS
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G46560.1 CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

1.5e-92

45.6

Show/hide

Query:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP
        M S P++R K      S+  + R    SSS+  + S+  PP+  FPSK +   L+ VL +A  V  +CNF    L +   + FCDS+ +  D   D CEP
Subjt:  MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEP

Query:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG
        CP +GEC++GKL+C  GY+    LC+EDG IN++ KKL  + E  +CE+ A   C G G +WV E+ +W +L   + + N+  D +   + K KA+E + 
Subjt:  CPSHGECHEGKLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIG

Query:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMS-TRNSGQCESWV
         L + R N+ GI ELKCP+ +A+SYKP TCR+  W+L+H  ++     +LVG   L  ++ R+Q  + R E+LY+QVC+ LEENA+ S +  +  CE WV
Subjt:  GLFQARQNALGIKELKCPDHLAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMS-TRNSGQCESWV

Query:  VASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR
        +AS LRD+LLLPRER+DPLLW KVEEL++EDSRIDRY +L+KG+ K VWEWQVEGSLS SK K+
Subjt:  VASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCAACTCCGAAGAGGCGAACGAAATTCAAGCATAATCTGAACTCTGATGTCGCTTCTAAACGCGATTCTTATGGTTCATCTTCTGCAGTGTTGCTGAATTCTAT
CAAGGGACCGCCTCGTGATTTCTTTCCCTCGAAGGATGATCTTACTAGGCTAATTACTGTACTTTTCATCGCCGGCTTGGTTTTTGTGAGTTGTAACTTCTTTGTATCTA
GACTTGAAACTCGCCGCCCGAGGCCTTTCTGCGACTCCGACGCCGATTCTTTTGATTTGCTTTCTGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCATGAAGGT
AAGTTGGAATGCGGTCATGGTTATAGAGAGCATGGTAGGTTATGTATAGAAGATGGAGTAATCAATAAAGCAGTTAAGAAACTTTCAGAATGGCTAGAATCTCACCTCTG
TGAAGCAAATGCCAAGTTTTTATGCGATGGAATTGGGATAGTTTGGGTTCAAGAGGATGCTATATGGGACGATCTCGATGGTAAAGCGCTGGTGGAAAACATTGATTCTG
ACAACACCACTATTATGTATGCAAAGAGCAAGGCATTGGAAACTATTGGTGGGTTATTCCAGGCACGGCAAAATGCTCTTGGTATCAAGGAATTGAAATGCCCAGATCAC
CTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTCCTTACTGCTCGTGGGATGCACATGGTTACT
ATGGAAACTTTGCCGGAGACAATATCTAACTAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTTGAGGAAAATGCTTTGATGTCAACGAGGAACAGTGGAC
AATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTATTATGGAGAAAGGTAGAAGAGTTGGTTCAGGAAGAT
TCACGAATAGATCGGTACCCGAGATTGGTCAAGGGGGATGGAAAAGAAGTATGGGAATGGCAAGTAGAAGGCTCTTTAAGCTCTTCAAAGGAAAAGAGACTGGCTAGCAA
ATCCAGTTCCAGAATGGTGATGGGAGTAAATTCTGACGTAATATACTCAAAAATGGAGAACGAGCTGAAGGCAGTAGTTTCGTGA

mRNA sequence

Show/hide mRNA sequence

AGAAAAAAAAAAAAAGGGAAAAAAAAGAGTAGTTTACTGATGTGGAAGGTTATTTTTGTCAAAACAACCAAGATAACCTAACCTACACCATAAATGGAGGGTATTTTGAG
AAAATTAATTTTTGTACCGCTCACGAAGCCCAATTTTCCAAAATAAAAAAAAAGGAGGCAAAGGAACGAAGCTGGAGAGGGGACTGAGCGAGGCCGCGAAGAACGACGTT
TATCGATGTCTTCAACTCCGAAGAGGCGAACGAAATTCAAGCATAATCTGAACTCTGATGTCGCTTCTAAACGCGATTCTTATGGTTCATCTTCTGCAGTGTTGCTGAAT
TCTATCAAGGGACCGCCTCGTGATTTCTTTCCCTCGAAGGATGATCTTACTAGGCTAATTACTGTACTTTTCATCGCCGGCTTGGTTTTTGTGAGTTGTAACTTCTTTGT
ATCTAGACTTGAAACTCGCCGCCCGAGGCCTTTCTGCGACTCCGACGCCGATTCTTTTGATTTGCTTTCTGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCATG
AAGGTAAGTTGGAATGCGGTCATGGTTATAGAGAGCATGGTAGGTTATGTATAGAAGATGGAGTAATCAATAAAGCAGTTAAGAAACTTTCAGAATGGCTAGAATCTCAC
CTCTGTGAAGCAAATGCCAAGTTTTTATGCGATGGAATTGGGATAGTTTGGGTTCAAGAGGATGCTATATGGGACGATCTCGATGGTAAAGCGCTGGTGGAAAACATTGA
TTCTGACAACACCACTATTATGTATGCAAAGAGCAAGGCATTGGAAACTATTGGTGGGTTATTCCAGGCACGGCAAAATGCTCTTGGTATCAAGGAATTGAAATGCCCAG
ATCACCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTCCTTACTGCTCGTGGGATGCACATGG
TTACTATGGAAACTTTGCCGGAGACAATATCTAACTAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTTGAGGAAAATGCTTTGATGTCAACGAGGAACAG
TGGACAATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTATTATGGAGAAAGGTAGAAGAGTTGGTTCAGG
AAGATTCACGAATAGATCGGTACCCGAGATTGGTCAAGGGGGATGGAAAAGAAGTATGGGAATGGCAAGTAGAAGGCTCTTTAAGCTCTTCAAAGGAAAAGAGACTGGCT
AGCAAATCCAGTTCCAGAATGGTGATGGGAGTAAATTCTGACGTAATATACTCAAAAATGGAGAACGAGCTGAAGGCAGTAGTTTCGTGACATGGCGCTCGTCCATGAGG
ATATTGTAGCTTAGCTGGTTAATAGAAAGAATGAAAACAAGAGGTACAAGATTTAAAAGTCCATAATTATTTTGTTTGATTCTTGTGTGAAGTACTTGTTAAGCTGGTTC
TGTTGCGACAACTGGGGCCTGTAGGGGTATGAGGTACTATAATATTATTCCCTTCTACTGTTCTTTCGATAGCACTATCTTGCCCCCTCCCACCTGGAGAATCCCATAGT
ATTTTAATGGACTGTTTGCGTG

Protein sequence

Show/hide protein sequence

MSSTPKRRTKFKHNLNSDVASKRDSYGSSSAVLLNSIKGPPRDFFPSKDDLTRLITVLFIAGLVFVSCNFFVSRLETRRPRPFCDSDADSFDLLSDACEPCPSHGECHEG
KLECGHGYREHGRLCIEDGVINKAVKKLSEWLESHLCEANAKFLCDGIGIVWVQEDAIWDDLDGKALVENIDSDNTTIMYAKSKALETIGGLFQARQNALGIKELKCPDH
LAESYKPFTCRIRHWVLQHAFVVLPVSLLLVGCTWLLWKLCRRQYLTNRAEDLYNQVCEILEENALMSTRNSGQCESWVVASRLRDHLLLPRERKDPLLWRKVEELVQED
SRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKRLASKSSSRMVMGVNSDVIYSKMENELKAVVS

CmoCh02G016310 (gene) of Cucurbita moschata (Rifu) v1 genome