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CmoCh02G016330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G016330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontwo-component response regulator-like APRR2
Genome locationCmo_Chr02:9410749..9411254
RNA-Seq ExpressionCmoCh02G016330
SyntenyCmoCh02G016330
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR044825 - Transcription activator GLK1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606226.1 Two-component response regulator-like APRR2, partial [Cucurbita argyrosperma subsp. sororia]8.0e-4387.62Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN
        MQADAWGCPVMLPSPAPYFSDPQ  QISASHNVYTATKSYGTPQ+SFDLQPDEE+I+EIVNE  RKP S LPLGLKPP AEIL+EE P+QGISTLTPQIN
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN

Query:  AFNPP
        AFNPP
Subjt:  AFNPP

XP_022958026.1 two-component response regulator-like APRR2 isoform X1 [Cucurbita moschata]1.7e-4592.31Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
        MQADAWGCPVMLPS APYFS PQ  Q S+SHNVYTA KSYGTPQ+SFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA

Query:  FNPP
        FNPP
Subjt:  FNPP

XP_022958027.1 two-component response regulator-like APRR2 isoform X2 [Cucurbita moschata]1.7e-4592.31Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
        MQADAWGCPVMLPS APYFS PQ  Q S+SHNVYTA KSYGTPQ+SFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA

Query:  FNPP
        FNPP
Subjt:  FNPP

XP_023532959.1 two-component response regulator-like APRR2 [Cucurbita pepo subsp. pepo]4.0e-4286.67Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN
        MQADAWGCPVMLPSPAPYFS PQ  QIS+SHNVYTA KSYGTPQ+SFDLQPDEE+IDEIVNE  RKP S LPLGLKPP AEIL+EELP+QGISTLTPQIN
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN

Query:  AFNPP
        AFNPP
Subjt:  AFNPP

XP_023533386.1 two-component response regulator-like APRR2 [Cucurbita pepo subsp. pepo]2.2e-4591.35Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
        M+ADAWGCPVMLPSPAPYFS PQ  QIS+SHNVYTA KSYGTPQ+SFDLQPDEEVIDEIVNEVMRKPRS+LPLGLKPPAEILVEELPRQ ISTLTPQINA
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA

Query:  FNPP
        FNPP
Subjt:  FNPP

TrEMBL top hitse value%identityAlignment
A0A6J1H0S7 two-component response regulator-like APRR2 isoform X28.3e-4692.31Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
        MQADAWGCPVMLPS APYFS PQ  Q S+SHNVYTA KSYGTPQ+SFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA

Query:  FNPP
        FNPP
Subjt:  FNPP

A0A6J1H0V7 two-component response regulator-like APRR2 isoform X18.3e-4692.31Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
        MQADAWGCPVMLPS APYFS PQ  Q S+SHNVYTA KSYGTPQ+SFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINA

Query:  FNPP
        FNPP
Subjt:  FNPP

A0A6J1K0B9 two-component response regulator-like APRR2 isoform X18.0e-4185.71Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN
        MQADAWGCPVMLPS APYFS PQ  QISASHNVYTA K YGTPQ SFDLQP+EE+IDEIVNE  RKP S LPLGLKPP AEILVEELP+QGISTLTPQIN
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN

Query:  AFNPP
        AFNPP
Subjt:  AFNPP

A0A6J1K5A8 two-component response regulator-like APRR2 isoform X78.0e-4185.71Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN
        MQADAWGCPVMLPS APYFS PQ  QISASHNVYTA K YGTPQ SFDLQP+EE+IDEIVNE  RKP S LPLGLKPP AEILVEELP+QGISTLTPQIN
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN

Query:  AFNPP
        AFNPP
Subjt:  AFNPP

A0A6J1K8X3 two-component response regulator-like APRR28.0e-4185.71Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN
        MQADAWGCPVMLPS APYFS PQ  QISASHNVYTA K YGTPQ SFDLQP+EE+IDEIVNE  RKP S LPLGLKPP AEILVEELP+QGISTLTPQIN
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTLTPQIN

Query:  AFNPP
        AFNPP
Subjt:  AFNPP

SwissProt top hitse value%identityAlignment
Q5NAN5 Probable transcription factor GLK24.4e-0434.83Show/hide
Query:  PVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP
        P+  P P P  S PQ ++++A              Q   D  P +E ID  + +V+ KP   LPLGLKPP+ + ++ EL +QGI  + P
Subjt:  PVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP

Q5Z5I4 Probable transcription factor GLK11.1e-0535.71Show/hide
Query:  GCPVM-LPSPAPYFSDPQVSQI--SASHNVYT----ATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP
        G P M +P PA  F  P V  +     +   T    A+K+    Q    +QP  E ID  + +V+ KP   LPLGLKPP+ + ++ EL RQG++ + P
Subjt:  GCPVM-LPSPAPYFSDPQVSQI--SASHNVYT----ATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP

Q6LA43 Two-component response regulator-like APRR22.1e-0939.39Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL
        +  +AWGCPV  P    Y        I+ S+      +     +T F +    QPDEE++D++V E + KP   LPLGLKPP AE ++ EL RQGIS +
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL

Q9FFH0 Transcription activator GLK26.2e-0634.74Show/hide
Query:  PVMLPSPAPYFSD----PQ-VSQISASH-NVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP
        P   P   PY+      PQ     S++H ++   T+  G      D+ P  E ID  + +V+ KP   LPLGLKPP+ + ++ EL RQG+S + P
Subjt:  PVMLPSPAPYFSD----PQ-VSQISASH-NVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP

Q9SIV3 Transcription activator GLK12.8e-0633.68Show/hide
Query:  GCPVMLPSPAPYFSDPQVSQISAS----HNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP
        G    LP+ A  F  P V+ I  +    H +Y     +G  +   DL P +E +D  + +V+ +P   LPLGL PPA + ++ EL R G+S + P
Subjt:  GCPVMLPSPAPYFSDPQVSQISAS----HNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP

Arabidopsis top hitse value%identityAlignment
AT2G20570.1 GBF's pro-rich region-interacting factor 12.0e-0733.68Show/hide
Query:  GCPVMLPSPAPYFSDPQVSQISAS----HNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP
        G    LP+ A  F  P V+ I  +    H +Y     +G  +   DL P +E +D  + +V+ +P   LPLGL PPA + ++ EL R G+S + P
Subjt:  GCPVMLPSPAPYFSDPQVSQISAS----HNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPA-EILVEELPRQGISTLTP

AT4G18020.1 CheY-like two-component responsive regulator family protein1.5e-1039.39Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL
        +  +AWGCPV  P    Y        I+ S+      +     +T F +    QPDEE++D++V E + KP   LPLGLKPP AE ++ EL RQGIS +
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL

AT4G18020.2 CheY-like two-component responsive regulator family protein1.5e-1039.39Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL
        +  +AWGCPV  P    Y        I+ S+      +     +T F +    QPDEE++D++V E + KP   LPLGLKPP AE ++ EL RQGIS +
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL

AT4G18020.3 CheY-like two-component responsive regulator family protein1.5e-1039.39Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL
        +  +AWGCPV  P    Y        I+ S+      +     +T F +    QPDEE++D++V E + KP   LPLGLKPP AE ++ EL RQGIS +
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL

AT4G18020.6 CheY-like two-component responsive regulator family protein1.5e-1039.39Show/hide
Query:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL
        +  +AWGCPV  P    Y        I+ S+      +     +T F +    QPDEE++D++V E + KP   LPLGLKPP AE ++ EL RQGIS +
Subjt:  MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDL----QPDEEVIDEIVNEVMRKPRSSLPLGLKPP-AEILVEELPRQGISTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCCTGCTCCATATTTTTCAGATCCTCAGGTGAGTCAAATTTCAGCATCCCACAACGTGTATACAGCAAC
TAAGAGCTATGGCACGCCTCAAACTTCATTTGATCTTCAACCAGATGAGGAGGTGATTGACGAGATTGTAAATGAGGTAATGAGGAAACCACGGTCATCTCTTCCATTGG
GGCTTAAACCTCCTGCAGAGATTCTTGTGGAAGAGCTTCCAAGGCAAGGAATCTCCACTCTTACACCTCAAATCAACGCCTTCAATCCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCCTGCTCCATATTTTTCAGATCCTCAGGTGAGTCAAATTTCAGCATCCCACAACGTGTATACAGCAAC
TAAGAGCTATGGCACGCCTCAAACTTCATTTGATCTTCAACCAGATGAGGAGGTGATTGACGAGATTGTAAATGAGGTAATGAGGAAACCACGGTCATCTCTTCCATTGG
GGCTTAAACCTCCTGCAGAGATTCTTGTGGAAGAGCTTCCAAGGCAAGGAATCTCCACTCTTACACCTCAAATCAACGCCTTCAATCCTCCCTGA
Protein sequenceShow/hide protein sequence
MQADAWGCPVMLPSPAPYFSDPQVSQISASHNVYTATKSYGTPQTSFDLQPDEEVIDEIVNEVMRKPRSSLPLGLKPPAEILVEELPRQGISTLTPQINAFNPP