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CmoCh02G016430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G016430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein ABCI7, chloroplastic-like
Genome locationCmo_Chr02:9474423..9474952
RNA-Seq ExpressionCmoCh02G016430
SyntenyCmoCh02G016430
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
InterPro domainsIPR000825 - SUF system FeS cluster assembly, SufBD
IPR011542 - SUF system FeS cluster assembly, SufD
IPR037284 - SUF system FeS cluster assembly, SufBD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606237.1 Protein ABCI7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

KAG7036179.1 Protein ABCI7, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

XP_022930962.1 protein ABCI7, chloroplastic-like [Cucurbita moschata]2.9e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

XP_022995959.1 protein ABCI7, chloroplastic-like [Cucurbita maxima]2.9e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

XP_023534131.1 protein ABCI7, chloroplastic-like [Cucurbita pepo subsp. pepo]2.9e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

TrEMBL top hitse value%identityAlignment
A0A0A0LEE9 Uncharacterized protein1.5e-4897.17Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPS SVRKRVENHIK+LLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

A0A1S3CQ30 protein ABCI7, chloroplastic-like3.8e-4795.28Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLP  SVRKRVENHIK+LLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        P LERS
Subjt:  PTLERS

A0A5D3E5C0 Protein ABCI73.8e-4795.28Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLP  SVRKRVENHIK+LLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        P LERS
Subjt:  PTLERS

A0A6J1ES56 protein ABCI7, chloroplastic-like1.4e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

A0A6J1K7C3 protein ABCI7, chloroplastic-like1.4e-4999.06Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
        +RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRVENHIKDLLN

Query:  PTLERS
        PTLERS
Subjt:  PTLERS

SwissProt top hitse value%identityAlignment
P77689 FeS cluster assembly protein SufD5.3e-1438.46Show/hide
Query:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRV
        +++A +TD      +LL+   A V+ KP L+I ADDVKCSHGA +  +++ Q+FY ++RGI+ + A++ +I++F AE+ E L    ++++V
Subjt:  SRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRV

Q3E8H7 Putative UPF0051 protein ABCI91.4e-0638.57Show/hide
Query:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPS
        S+L+   A  N  P +Q+     +  H A+ S + E Q+FYFQ RGID E A  A+I  F  +V  +LP+
Subjt:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPS

Q55792 UPF0051 protein slr00763.0e-1748.86Show/hide
Query:  AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRV
        AQ T+A QL R+L+L  +A +N KP LQI AD+VKCSHGA IS LE  ++FY ++RG++   AR  LI +F  E+++++P AS++ R+
Subjt:  AQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSASVRKRV

Q9LQK7 Protein ABCI7, chloroplastic1.1e-3862.96Show/hide
Query:  KVLLEASIGRMAKLNDHLCRTQHD-----------FSRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLE
        K++L+   G   +L  H C   H             +R+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE QLFYFQARGIDLE
Subjt:  KVLLEASIGRMAKLNDHLCRTQHD-----------FSRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLE

Query:  TARKALIFSFGAEVIERLPSASVRKRVENHIKDLL
        TAR+ALI SFG+EVIE+ P+  +R +  NH+K LL
Subjt:  TARKALIFSFGAEVIERLPSASVRKRVENHIKDLL

Q9ZS97 UPF0051 protein ABCI8, chloroplastic2.8e-0742.03Show/hide
Query:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLP
        S+L+  +A  N  P +Q+     K  H A+ S + E QLFYFQ RGID E A  A+I  F  +V  +LP
Subjt:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLP

Arabidopsis top hitse value%identityAlignment
AT1G32500.1 non-intrinsic ABC protein 67.5e-4062.96Show/hide
Query:  KVLLEASIGRMAKLNDHLCRTQHD-----------FSRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLE
        K++L+   G   +L  H C   H             +R+AQQT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE QLFYFQARGIDLE
Subjt:  KVLLEASIGRMAKLNDHLCRTQHD-----------FSRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLE

Query:  TARKALIFSFGAEVIERLPSASVRKRVENHIKDLL
        TAR+ALI SFG+EVIE+ P+  +R +  NH+K LL
Subjt:  TARKALIFSFGAEVIERLPSASVRKRVENHIKDLL

AT4G04770.1 ATP binding cassette protein 12.0e-0842.03Show/hide
Query:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLP
        S+L+  +A  N  P +Q+     K  H A+ S + E QLFYFQ RGID E A  A+I  F  +V  +LP
Subjt:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLP

AT5G44316.1 Stabilizer of iron transporter SufD superfamily protein9.9e-0838.57Show/hide
Query:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPS
        S+L+   A  N  P +Q+     +  H A+ S + E Q+FYFQ RGID E A  A+I  F  +V  +LP+
Subjt:  SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGAACAAAAGACAAGACGCTTAAAATGGTAGTTCTACTAGGAAAGCTTAGTATCTTGAAAGTTCTGTTGGAGGCAAGTATTGGTAGGATGGCAAAACTTAATGA
CCACCTTTGTCGCACGCAACATGATTTCTCCAGATACGCACAGCAAACAGATGCAGGACAACTAACAAGGAGTCTTCTTCTGGAACCTCGAGCCACCGTGAATGTGAAAC
CGAATCTTCAAATCATCGCAGACGATGTCAAATGCTCACATGGAGCTGCTATAAGCGACCTGGAGGAAACCCAACTCTTCTATTTTCAGGCTCGTGGCATTGACTTAGAG
ACAGCGAGAAAGGCTCTGATATTTTCATTCGGAGCCGAGGTGATCGAACGGCTGCCTTCCGCTTCAGTCCGCAAGAGGGTCGAGAATCATATAAAAGACTTGTTGAATCC
CACGCTTGAAAGATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGAACAAAAGACAAGACGCTTAAAATGGTAGTTCTACTAGGAAAGCTTAGTATCTTGAAAGTTCTGTTGGAGGCAAGTATTGGTAGGATGGCAAAACTTAATGA
CCACCTTTGTCGCACGCAACATGATTTCTCCAGATACGCACAGCAAACAGATGCAGGACAACTAACAAGGAGTCTTCTTCTGGAACCTCGAGCCACCGTGAATGTGAAAC
CGAATCTTCAAATCATCGCAGACGATGTCAAATGCTCACATGGAGCTGCTATAAGCGACCTGGAGGAAACCCAACTCTTCTATTTTCAGGCTCGTGGCATTGACTTAGAG
ACAGCGAGAAAGGCTCTGATATTTTCATTCGGAGCCGAGGTGATCGAACGGCTGCCTTCCGCTTCAGTCCGCAAGAGGGTCGAGAATCATATAAAAGACTTGTTGAATCC
CACGCTTGAAAGATCCTAA
Protein sequenceShow/hide protein sequence
MPRTKDKTLKMVVLLGKLSILKVLLEASIGRMAKLNDHLCRTQHDFSRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLE
TARKALIFSFGAEVIERLPSASVRKRVENHIKDLLNPTLERS