CuGenDBv2

Gene ID	CmoCh02G016720
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	GTPase
Genome location	Cmo_Chr02:9592736..9596761
RNA-Seq Expression	CmoCh02G016720
Synteny	CmoCh02G016720
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606267.1 hypothetical protein SDJN03_03584, partial [Cucurbita argyrosperma subsp. sororia]

9.9e-103

95.92

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRN EVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEA+KMNY  GGFNNVIREDIM+WMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

XP_022159442.1 uncharacterized protein LOC111025863 isoform X1 [Momordica charantia]

2.3e-75

76.14

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +QH++ EVG N G+ I + LN+MK SAEI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY ICGSEAM+ NY  G F+ VIREDI++WMLR+
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

XP_022930989.1 uncharacterized protein LOC111437317 [Cucurbita moschata]

7.8e-108

100

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

XP_022995481.1 uncharacterized protein LOC111491005 [Cucurbita maxima]

9.3e-101

95.96

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRN EVG NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAM-KMNYIGGGFNNVIREDIMRWMLRN
        MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEAM  MNY  GGFNNVIREDIM+WMLRN
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAM-KMNYIGGGFNNVIREDIMRWMLRN

XP_023533976.1 uncharacterized protein LOC111795664 [Cucurbita pepo subsp. pepo]

5.2e-104

96.94

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFK+AMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRN EVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEAMKMNY  GGFNNVIREDIM+WMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

1.1e-75

76.14

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +QH++ EVG N G+ I + LN+MK SAEI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY ICGSEAM+ NY  G F+ VIREDI++WMLR+
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

A0A6J1E2E5 uncharacterized protein LOC111025863 isoform X2

1.2e-66

69.9

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +QH++ EVG                             MKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        +KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY ICGSEAM+ NY  G F+ VIREDI++WMLR+
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

A0A6J1ET19 uncharacterized protein LOC111437317

3.8e-108

100

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

A0A6J1HFJ9 uncharacterized protein LOC111463851

4.0e-65

67.01

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MVLWEI LATAYFLGLKRTFKL +K QRRLVSP HPRIR+FL  RTRAIFDVT+K H+ I+HR+ +VG N+ SWIS+ LNR K SA IH+ P G    MK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN
        M+KQ S+SY+KHR S RA I QK D+Y+S TSSVH WPK FPTIAMIMRQ KPA  GTM Q+RQ+ IC SE MK NY  G F + IR+DI +WM+RN
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

A0A6J1K213 uncharacterized protein LOC111491005

4.5e-101

95.96

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRN EVG NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAM-KMNYIGGGFNNVIREDIMRWMLRN
        MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEAM  MNY  GGFNNVIREDIM+WMLRN
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAM-KMNYIGGGFNNVIREDIMRWMLRN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

5.5e-43

48.02

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MV WEITL TAYFLGL+RT++LA+KIQRRLV+PKHP+IRQFL  RTR IFDV + VH+ IQ R+ EVG NLG+WI R L++MK +A+I   P  P     
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQ-----KFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY---GICGSEAMKMNYIGGGFNNVIREDIMR
         + +A       RP      +Q     + D+++  TS  H   KPFP+++M+++ P+P GT T  QYR Y   G+  S        GGGFN V+R+DI++
Subjt:  MVKQASSSYLKHRPSPRAVISQ-----KFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY---GICGSEAMKMNYIGGGFNNVIREDIMR

Query:  WM
        WM
Subjt:  WM

AT2G35480.1 unknown protein

8.8e-41

44.9

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK
        MVLWE+ L TAYFLG++RT++LA+K QRRLVSPKHPRIR F+  RT  IFD+ ++VH+ IQ R+  +G NLG+WI RGL+RMK SA++  P        K
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVG-NLGSWISRGLNRMKQSAEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLR
          +   S+ LK   + +   +++ D+  ++  S+  +   +P  +M+M +P P  TGT  QYR Y +  S  +K  Y  GGFN+VIR+DI++WM++
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGTTGTGGGAGATTACATTGGCAACAGCGTATTTCTTGGGGCTAAAGCGAACGTTTAAGCTCGCTATGAAGATTCAGCGACGTCTTGTTTCCCCCAAGCACCCTCG
GATTCGTCAATTTCTGCGCGGACGTACACGCGCCATATTTGATGTTACCGTAAAAGTTCACCAGAGAATTCAGCATCGAAACACAGAAGTTGGTAATCTTGGTAGCTGGA
TTTCACGAGGGCTTAATCGAATGAAACAATCCGCTGAGATTCATGAACCTCCAAGGGGGCCTATGAAATGTATGAAAATGGTGAAGCAGGCTTCCAGCTCCTACTTGAAA
CACCGGCCCAGCCCTCGAGCTGTGATTAGTCAGAAATTCGATCAATATATGTCAATTACCTCATCAGTACACAGATGGCCTAAGCCCTTCCCTACCATTGCAATGATCAT
GAGGCAGCCGAAGCCTGCTGGAACTGGGACCATGATCCAATACCGACAATATGGCATTTGTGGCTCTGAAGCAATGAAAATGAATTACATAGGAGGAGGTTTCAACAACG
TTATTCGAGAAGATATTATGCGGTGGATGCTCCGAAATTAG

mRNA sequence

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AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGAGCGAGGGAAAATGGTGTTGTGGGAGATTACATTGGCAACAGCGTATTTCTTGGGGCTAAAGCGAA
CGTTTAAGCTCGCTATGAAGATTCAGCGACGTCTTGTTTCCCCCAAGCACCCTCGGATTCGTCAATTTCTGCGCGGACGTACACGCGCCATATTTGATGTTACCGTAAAA
GTTCACCAGAGAATTCAGCATCGAAACACAGAAGTTGGTAATCTTGGTAGCTGGATTTCACGAGGGCTTAATCGAATGAAACAATCCGCTGAGATTCATGAACCTCCAAG
GGGGCCTATGAAATGTATGAAAATGGTGAAGCAGGCTTCCAGCTCCTACTTGAAACACCGGCCCAGCCCTCGAGCTGTGATTAGTCAGAAATTCGATCAATATATGTCAA
TTACCTCATCAGTACACAGATGGCCTAAGCCCTTCCCTACCATTGCAATGATCATGAGGCAGCCGAAGCCTGCTGGAACTGGGACCATGATCCAATACCGACAATATGGC
ATTTGTGGCTCTGAAGCAATGAAAATGAATTACATAGGAGGAGGTTTCAACAACGTTATTCGAGAAGATATTATGCGGTGGATGCTCCGAAATTAGAAGAGAATGTTTTC
TAGTTGCCCTCTCCTTGGAGACTACAATATTTGGCCGACAATACAGTCTTTAGTCAAGTGTTTAGCTTCCAATCTTAGATTGTTCCTTCTCTTCTTGATGTAAAATCTTT
CTAACATGTTCCTAGGGAAGTTGGAAATCATGTCTATGCACATGAATAAATTAGATAGCTAATCCCCAGTATGAAAGAGACCTCTTTGAATCGACATTTTAAGCGCTTAA
AAACGCTTTAATACTTTAGAACTCTTAAAAAGTCGTTCCAATGAGTCTATACCATAGTTACCAAAATGTCCACTTGGAAGTTCATTGAATATACTTCATTTAAGCTGGGT
ATTGGCTCTGTTTCGTGTCAATAATTTTAATTCATCACTTTGTAAGCTTATTGTATACTACTACAAG

Protein sequence

Show/hide protein sequence

MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNTEVGNLGSWISRGLNRMKQSAEIHEPPRGPMKCMKMVKQASSSYLK
HRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYGICGSEAMKMNYIGGGFNNVIREDIMRWMLRN

CmoCh02G016720 (gene) of Cucurbita moschata (Rifu) v1 genome