CuGenDBv2

Gene ID	CmoCh02G016770
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	SANT domain-containing protein
Genome location	Cmo_Chr02:9623204..9624935
RNA-Seq Expression	CmoCh02G016770
Synteny	CmoCh02G016770
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0010158 - abaxial cell fate specification (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domains	IPR044847 - Transcription repressor KANADI

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606272.1 Transcription repressor KAN1, partial [Cucurbita argyrosperma subsp. sororia]

4.3e-56

99.14

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Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
        +GQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG

Query:  NLPQKPNLEFTLGRAV
        NLPQKPNLEFTLGRAV
Subjt:  NLPQKPNLEFTLGRAV

XP_022931214.1 probable transcription factor KAN2 isoform X1 [Cucurbita moschata]

4.3e-56

99.14

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Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
        +GQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG

Query:  NLPQKPNLEFTLGRAV
        NLPQKPNLEFTLGRAV
Subjt:  NLPQKPNLEFTLGRAV

XP_022931215.1 probable transcription factor KAN2 isoform X2 [Cucurbita moschata]

1.0e-54

100

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Query:  SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP
        SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP
Subjt:  SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP

Query:  QKPNLEFTLGRAV
        QKPNLEFTLGRAV
Subjt:  QKPNLEFTLGRAV

XP_022996128.1 probable transcription factor KAN2 isoform X1 [Cucurbita maxima]

2.1e-55

97.41

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Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
        +GQSDLYENASSGDTSNIEDIIFDIQKP+MGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG

Query:  NLPQKPNLEFTLGRAV
        N+PQKPNLEFTLGRAV
Subjt:  NLPQKPNLEFTLGRAV

XP_023532395.1 probable transcription factor KAN2 isoform X1 [Cucurbita pepo subsp. pepo]

2.3e-54

97.44

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Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
        +GQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG

Query:  N-LPQKPNLEFTLGRAV
        N LP+KPNLEFTLGRAV
Subjt:  N-LPQKPNLEFTLGRAV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1ET31 probable transcription factor KAN2 isoform X3

2.0e-51

100

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Query:  ASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKPNLE
        ASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKPNLE
Subjt:  ASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKPNLE

Query:  FTLGRAV
        FTLGRAV
Subjt:  FTLGRAV

A0A6J1ETP5 probable transcription factor KAN2 isoform X1

2.1e-56

99.14

Show/hide

Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
        +GQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG

Query:  NLPQKPNLEFTLGRAV
        NLPQKPNLEFTLGRAV
Subjt:  NLPQKPNLEFTLGRAV

A0A6J1EYU6 probable transcription factor KAN2 isoform X2

5.1e-55

100

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Query:  SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP
        SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP
Subjt:  SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP

Query:  QKPNLEFTLGRAV
        QKPNLEFTLGRAV
Subjt:  QKPNLEFTLGRAV

A0A6J1K7V2 probable transcription factor KAN2 isoform X2

2.5e-54

98.23

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Query:  SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP
        SDLYENASSGDTSNIEDIIFDIQKP+MGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGN+P
Subjt:  SDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLP

Query:  QKPNLEFTLGRAV
        QKPNLEFTLGRAV
Subjt:  QKPNLEFTLGRAV

A0A6J1K9Z3 probable transcription factor KAN2 isoform X1

1.0e-55

97.41

Show/hide

Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
        +GQSDLYENASSGDTSNIEDIIFDIQKP+MGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSG

Query:  NLPQKPNLEFTLGRAV
        N+PQKPNLEFTLGRAV
Subjt:  NLPQKPNLEFTLGRAV

SwissProt top hits

e value

%identity

Alignment

Q9C616 Probable transcription factor KAN2

4.3e-11

Show/hide

Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS--EISS
        +GQSD+YEN SSGD +N +D +FD+ + S  R +E        NP +    + LW+NSS EA LHG   D+  ++    E ++D K S+ ER+S  E+SS
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS--EISS

Query:  ---SGNLPQKPNLEFTLGRA
           SG  P KPNLEFTLGR+
Subjt:  ---SGNLPQKPNLEFTLGRA

Arabidopsis top hits

e value

%identity

Alignment

AT1G32240.1 Homeodomain-like superfamily protein

3.1e-12

Show/hide

Query:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS--EISS
        +GQSD+YEN SSGD +N +D +FD+ + S  R +E        NP +    + LW+NSS EA LHG   D+  ++    E ++D K S+ ER+S  E+SS
Subjt:  TGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS--EISS

Query:  ---SGNLPQKPNLEFTLGRA
           SG  P KPNLEFTLGR+
Subjt:  ---SGNLPQKPNLEFTLGRA

Sequences

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CDS sequence

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mRNA sequence

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ATGAATATTTACACAGGGCAATCAGATTTATACGAGAATGCTTCATCAGGGGACACGAGCAATATTGAAGATATAATATTTGACATTCAAAAGCCAAGCATGGGAAGGCA
AAATGAGCACTCAGTTCAACAAAATAGGCAAAACCCTCATCAAGATAAGGATTATCATGCCCTCTGGAGCAATTCTTCCAGGGAAGCTTGGTTGCATGGTTTTCCTAATG
ATTCTTCTAGGGACCTTTCATCGTCCCTCGAGAATGACGTGGATCCAAAGAGCTCAAACAACGAGAGACTATCGGAGATAAGCTCGTCGGGGAACCTTCCTCAGAAGCCT
AATTTGGAATTCACATTAGGAAGGGCAGTTTGATGAACATAACATTATATGTGTGAGAACAGAAATTGAAGTGAAGTTGGAGCCTCTGAAGAACAAAAAAAGAAATTGAT
TTTAAAGAAAAAGAAAGAAAGAAAAAAAAAAAGAGAGGTAAAGAAAGACAAGCAGACAAGAAAAAAAGACAAAAAGCAACAAAAGCAGATCCTAATTCCCATCAACCTTT
GAGGTCCCAAATCATCTTATTTTATTTCAGCAAATCAAATATATGAATCTAATTGATTTTTTGTTTGTTTTGCACTTACAAAAAAAAGAAAAAAAAGAAGAGAAGGAGGA
AATTAACCTTCGAAATTGTAACCAATGAAGCCATTGTTCGTCTTTTTTTTTTTTTTTTGGTTTCTCGAGTAGAGAAGATTTGAACCTATAACCTGTAAATATATGGTTTT
TTTTCTTTATTCAGATAAATTATAAATCTGGTGTCGAAG

Protein sequence

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MNIYTGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP
NLEFTLGRAV

CmoCh02G016770 (gene) of Cucurbita moschata (Rifu) v1 genome