; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G016920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G016920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L35
Genome locationCmo_Chr02:9707800..9710601
RNA-Seq ExpressionCmoCh02G016920
SyntenyCmoCh02G016920
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036224.1 hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-6075.14Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRS LSPLY V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +  K+  K       ++++ + K   SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]2.1e-5467.76Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  V++  V               + 
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +R + +      S  +  + +   SYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
XP_022931031.1 uncharacterized protein LOC111437349 [Cucurbita moschata]1.1e-6075.68Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLY V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +  K+  K       ++++ + K   SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
XP_022996248.1 uncharacterized protein LOC111491530 [Cucurbita maxima]1.3e-5974.59Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHS PSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLY V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDKM--SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +  K+  K       ++++ + K   SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDKM--SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]5.7e-6075.14Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLY V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +  K+  K       ++++ + K   SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
TrEMBL top hitse value%identityAlignment
A0A0A0LBT5 Uncharacterized protein4.5e-4764.29Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLR C+KLRSAAAKPSQI++SVSSTRRIFHSAPSLYQPLHFS NNL+SRSL NAS QTHS LAAYQCIRSS  PL  V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
          +R K +      S  +  + +   SYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+P  VPLAYAKVMKKLNFC
Subjt:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
A0A1S3CDR4 uncharacterized protein LOC1034992528.3e-4965.93Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWC+KLRSAAAKPSQIV SVSSTRRIFHSAPSLYQPLHFSPNNL+SRSL NA  QTHS LAAYQCIRSSL PL  V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
          +R K +      S  +  + +   SYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+P  VPLAYAKVMKKLNFC
Subjt:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
A0A6J1DPB8 uncharacterized protein LOC1110230591.0e-5467.76Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  V++  V               + 
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +R + +      S  +  + +   SYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
A0A6J1ESK5 uncharacterized protein LOC1114373495.5e-6175.68Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLY V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +  K+  K       ++++ + K   SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDK--MSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
A0A6J1KAA4 uncharacterized protein LOC1114915306.1e-6074.59Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHS PSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLY V++  V            SS   
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATC

Query:  FVKRAKEEEKADDASYFQIEENEDKM--SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
          +  K+  K       ++++ + K   SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  FVKRAKEEEKADDASYFQIEENEDKM--SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G45590.1 Ribosomal protein L351.8e-1637.76Show/hide
Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPN---NLSSRSLLNASLQTHSSLAAYQCIRSSLS-------PLYFVEMLGVIYWIFGK
        M R+C+KLRS          S+ S R +     S ++ +H SP+   +L++ +L  A+    S + A     S++S       P +FV++  +       
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPN---NLSSRSLLNASLQTHSSLAAYQCIRSSLS-------PLYFVEMLGVIYWIFGK

Query:  CLGGCSSATCFVKRAKEEEKADDASYFQIEENEDKM----SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
                T   K AK ++K    +    +  + K+    S+K RF    DG+I+R KEGKRHNAHLKSKK+KRRLRQPG VP AYAKVMKKLNFC
Subjt:  CLGGCSSATCFVKRAKEEEKADDASYFQIEENEDKM----SYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAGCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTT
TACCAGCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTTACAGACTCATTCTTCGCTTGCAGCTTACCAGTGCATTCGATCT
TCGCTCTCACCTCTCTATTTCGTTGAGATGCTTGGAGTTATATATTGGATTTTCGGGAAATGCTTGGGAGGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCG
AAAGAAGAGGAGAAAGCCGATGACGCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAATGTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATT
AAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTTGAAGTCCAAAAAAGCAAAGCGTAGACTGAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTA
ATGAAGAAGCTCAACTTTTGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTTTAACAATTCCCTTTGGTCATACGACGGCGACGACGATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAG
CGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTTTACCAGCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTT
ACAGACTCATTCTTCGCTTGCAGCTTACCAGTGCATTCGATCTTCGCTCTCACCTCTCTATTTCGTTGAGATGCTTGGAGTTATATATTGGATTTTCGGGAAATG
CTTGGGAGGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCGAAAGAAGAGGAGAAAGCCGATGACGCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAAT
GTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTTGAAGTCCAAAAAAGCAAAGCGTAG
ACTGAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAAATTATTGGTACAAGTCTCCTGTCGTGCTAGTTTCA
AGATCACCATCGAGATATCAGTCCTTGCTCATCTTTTGGATTTTATATTAAGTGCCTTAGAACAAACTAAGAAAACAATTATTTCTTCTTTATTTGAAGTTTTGA
TGATAGAGATGATTGTGATTAAAAACGAGGTGATCTTTCAATTGTCTCCTTGTACCCTGAGTTAACCCCTAACAGTGTCCAATAATATTTATCTTTCGCATGGGA
TACGGTCCTACATGTGGCTTGCAATTACCATTTAATTTTCTATCCCTTTCATATTTCCCAATAAATTTG
Protein sequenceShow/hide protein sequence
MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSSLSPLYFVEMLGVIYWIFGKCLGGCSSATCFVKRA
KEEEKADDASYFQIEENEDKMSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG