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CmoCh02G016980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G016980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTumor necrosis factor alpha-induced protein like
Genome locationCmo_Chr02:9730154..9733897
RNA-Seq ExpressionCmoCh02G016980
SyntenyCmoCh02G016980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606288.1 hypothetical protein SDJN03_03605, partial [Cucurbita argyrosperma subsp. sororia]5.5e-7399.36Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKD+ASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDSTYR
        SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDSTYR
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDSTYR

KAG7036229.1 hypothetical protein SDJN02_03031, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6597.93Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRV AGLFKSSSRNISSLFTISDLKD+ASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE
         QIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE

XP_022931189.1 uncharacterized protein LOC111437446 isoform X1 [Cucurbita moschata]2.0e-7099.35Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS
        SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK S
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS

XP_022995633.1 uncharacterized protein LOC111491109 [Cucurbita maxima]1.6e-6488.1Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKN DRTRRS AAELLETPPLTPPSATDSPKSAIFSRKINGNVSKF SPENTNTAKNRVAAGLFKSSSRNISSL TISDLKDLASSQLHDLKRL DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK-----------DSTYRD
        SQIVED+ESSNSRLQKRFKIQSQACQKMMDE E E KKMSQRIYESQEAMK           DSTYRD
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK-----------DSTYRD

XP_023532951.1 uncharacterized protein LOC111794964 [Cucurbita pepo subsp. pepo]2.5e-6588.62Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKN DRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKIN NVSKFSSPENTNTAKNRVAA LFKS SRNISSL TISDLKDLASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK-----------DSTYR
        SQIVED+ESSNSRLQKRFKIQSQACQKMMDE EKE KKMSQRIYESQEAMK           DSTYR
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK-----------DSTYR

TrEMBL top hitse value%identityAlignment
A0A6J1ETM0 uncharacterized protein LOC111437446 isoform X19.5e-7199.35Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS
        SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK S
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS

A0A6J1HH77 uncharacterized protein LOC111464038 isoform X23.6e-5481.7Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGK R RTRRSSAAELLETPP TP  ATDSPKSAIF+RKIN N +KFSSPENTN  KNRV AGLFKS SRN SSL TISDLKD A+SQL DLKR +DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS
        SQI++D ESS SRL+KRFKIQSQACQKMMDE EKE KKMSQRIYESQEAMK S
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS

A0A6J1HLD9 uncharacterized protein LOC111464038 isoform X13.6e-5481.7Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGK R RTRRSSAAELLETPP TP  ATDSPKSAIF+RKIN N +KFSSPENTN  KNRV AGLFKS SRN SSL TISDLKD A+SQL DLKR +DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS
        SQI++D ESS SRL+KRFKIQSQACQKMMDE EKE KKMSQRIYESQEAMK S
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS

A0A6J1HRE1 uncharacterized protein LOC1114670967.3e-5581.7Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGK R RTRRSSAAELLETPP TPP ATDSPKSAIF+RKIN N +KFSSPENTN  KNR  AGLFKS SRN SSL TISDLKD A+SQL DLKR +DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS
        SQI++D ESS SRL+KRFKIQSQACQKMMDE EKE KKMSQRIYESQEAMK S
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDS

A0A6J1K8J7 uncharacterized protein LOC1114911097.8e-6588.1Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH
        MGKN DRTRRS AAELLETPPLTPPSATDSPKSAIFSRKINGNVSKF SPENTNTAKNRVAAGLFKSSSRNISSL TISDLKDLASSQLHDLKRL DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSH

Query:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK-----------DSTYRD
        SQIVED+ESSNSRLQKRFKIQSQACQKMMDE E E KKMSQRIYESQEAMK           DSTYRD
Subjt:  SQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMK-----------DSTYRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACAGGGATCGAACTCGCCGGTCCTCAGCAGCGGAGCTTCTGGAGACGCCGCCGTTAACGCCTCCTTCGGCTACCGATTCTCCAAAGTCAGCGATCTTCAG
CAGAAAAATTAACGGCAATGTAAGCAAGTTTTCGTCACCGGAGAATACCAACACTGCGAAAAACAGAGTCGCCGCTGGTCTCTTTAAGTCGTCTTCTCGAAATATTTCGA
GCTTGTTTACTATATCTGATCTCAAGGATCTTGCGTCTTCACAGCTACACGATCTCAAGCGCCTTGTTGATCACTCTCACTCACAAATCGTTGAAGACATTGAATCCTCA
AACTCGCGCCTCCAAAAGCGATTCAAGATTCAAAGTCAAGCATGCCAGAAAATGATGGATGAAGTAGAGAAGGAGAAAAAGAAGATGTCTCAAAGAATTTATGAAAGTCA
GGAAGCAATGAAGGATAGTACATATCGGGATGTTCTGCTGAAAATGGCCTATTGTACTGGTTCTGCATGGCTTTTCATGATTCCAAGTTTGCTCCCTTCCCAGGAAAACC
TTTTCTTAAAACGGCAACATCACAAATTCAATTACTATACGCGACGTCATCTGGTTCTCGAGCGTATCTTCACTCAAGTAGCTCTACCTGTAAGAATTTCATTTTCTAGT
TTACTTCCGAAGCAGTTGAAAATGGTTGAGTTGTCGTGGCTAATGCCTCCTCTCTCTTTCATGACCATCCCAACACTTTTACCTTCACCGATGTTCAGTGAAAGTCGAAT
ACAACAAAAAGTAAGGCGAAAGATCGTACTTTTCCCAGTATTTTTACTGTATTCGGTTTCTTCTTTACGACATCCCCATCTCATCCCTTTAGCCATTGAGGCTACTGCAT
CTACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAACAGGGATCGAACTCGCCGGTCCTCAGCAGCGGAGCTTCTGGAGACGCCGCCGTTAACGCCTCCTTCGGCTACCGATTCTCCAAAGTCAGCGATCTTCAG
CAGAAAAATTAACGGCAATGTAAGCAAGTTTTCGTCACCGGAGAATACCAACACTGCGAAAAACAGAGTCGCCGCTGGTCTCTTTAAGTCGTCTTCTCGAAATATTTCGA
GCTTGTTTACTATATCTGATCTCAAGGATCTTGCGTCTTCACAGCTACACGATCTCAAGCGCCTTGTTGATCACTCTCACTCACAAATCGTTGAAGACATTGAATCCTCA
AACTCGCGCCTCCAAAAGCGATTCAAGATTCAAAGTCAAGCATGCCAGAAAATGATGGATGAAGTAGAGAAGGAGAAAAAGAAGATGTCTCAAAGAATTTATGAAAGTCA
GGAAGCAATGAAGGATAGTACATATCGGGATGTTCTGCTGAAAATGGCCTATTGTACTGGTTCTGCATGGCTTTTCATGATTCCAAGTTTGCTCCCTTCCCAGGAAAACC
TTTTCTTAAAACGGCAACATCACAAATTCAATTACTATACGCGACGTCATCTGGTTCTCGAGCGTATCTTCACTCAAGTAGCTCTACCTGTAAGAATTTCATTTTCTAGT
TTACTTCCGAAGCAGTTGAAAATGGTTGAGTTGTCGTGGCTAATGCCTCCTCTCTCTTTCATGACCATCCCAACACTTTTACCTTCACCGATGTTCAGTGAAAGTCGAAT
ACAACAAAAAGTAAGGCGAAAGATCGTACTTTTCCCAGTATTTTTACTGTATTCGGTTTCTTCTTTACGACATCCCCATCTCATCCCTTTAGCCATTGAGGCTACTGCAT
CTACGTAG
Protein sequenceShow/hide protein sequence
MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVAAGLFKSSSRNISSLFTISDLKDLASSQLHDLKRLVDHSHSQIVEDIESS
NSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYESQEAMKDSTYRDVLLKMAYCTGSAWLFMIPSLLPSQENLFLKRQHHKFNYYTRRHLVLERIFTQVALPVRISFSS
LLPKQLKMVELSWLMPPLSFMTIPTLLPSPMFSESRIQQKVRRKIVLFPVFLLYSVSSLRHPHLIPLAIEATAST