; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G017130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G017130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationCmo_Chr02:9812199..9814619
RNA-Seq ExpressionCmoCh02G017130
SyntenyCmoCh02G017130
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606306.1 hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6298.51Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+GFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        LSIDDIMASIC ERRKKPGKRSRPKADSRPKKKL
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

KAG7036244.1 hypothetical protein SDJN02_03046 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-6194.96Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        SLEKVLSIDDIMASIC ERRKKPGKRSRPKADSRPKKKL
Subjt:  SLEKVLSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

XP_022931147.1 uncharacterized protein LOC111437414 [Cucurbita moschata]4.7e-64100Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

XP_022995750.1 uncharacterized protein LOC111491189 [Cucurbita maxima]1.7e-6196.27Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+GFILMEHLKGQLSVS VPDQSQFSALNGSNLLDSSLEK+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        LSIDDIMASIC ERRKKPGKRSRPKADSRP+KKL
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

XP_023533769.1 uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]8.9e-6398.51Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEK+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        LSIDDIMASIC ERRKKPGKRSRPKADSRPKKKL
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

TrEMBL top hitse value%identityAlignment
A0A1S3BQH9 uncharacterized protein LOC1034924133.1e-4579.67Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRAIGF+LMEHLKG+L  S V D SQ + LN  NLLDS++EK+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSR
        LSID+IMASIC +RRKKPGKR R
Subjt:  LSIDDIMASICCERRKKPGKRSR

A0A5A7UQA1 Uncharacterized protein5.3e-4578.86Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRAIGF+LMEHLKG+L  S V D SQ + LN  NLLDS++EK+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSR
        LSID+IMASIC +RRKKPGKR +
Subjt:  LSIDDIMASICCERRKKPGKRSR

A0A6J1DR49 uncharacterized protein LOC1110230683.8e-5183.46Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRAIGF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEK+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKK
        LSID+IMAS+C +RRKKPGKR R KADSR K +
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKK

A0A6J1ESQ9 uncharacterized protein LOC1114374142.3e-64100Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

A0A6J1K2S6 uncharacterized protein LOC1114911898.2e-6296.27Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+GFILMEHLKGQLSVS VPDQSQFSALNGSNLLDSSLEK+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKV

Query:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL
        LSIDDIMASIC ERRKKPGKRSRPKADSRP+KKL
Subjt:  LSIDDIMASICCERRKKPGKRSRPKADSRPKKKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component2.1e-2546.83Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSL
        MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR++G +LMEH +   Q   S  P    Q   L+  NLL + +
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSL

Query:  EKVLSIDDIMASICCERRKKPGKRSR
        +  + I++I+  IC  + KK  ++ R
Subjt:  EKVLSIDDIMASICCERRKKPGKRSR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component2.1e-2546.83Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSL
        MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR++G +LMEH +   Q   S  P    Q   L+  NLL + +
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSL

Query:  EKVLSIDDIMASICCERRKKPGKRSR
        +  + I++I+  IC  + KK  ++ R
Subjt:  EKVLSIDDIMASICCERRKKPGKRSR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component2.1e-2546.83Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSL
        MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR++G +LMEH +   Q   S  P    Q   L+  NLL + +
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSL

Query:  EKVLSIDDIMASICCERRKKPGKRSR
        +  + I++I+  IC  + KK  ++ R
Subjt:  EKVLSIDDIMASICCERRKKPGKRSR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown6.7e-2449.22Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRAIGFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSS
        MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR++G +LME+++ ++    S  P   Q  S L+  NLL + 
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRAIGFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSS

Query:  LEKVLSIDDIMASICCER-RKKPGKRSR
        ++  + I++I+  IC ++ +KK  KRSR
Subjt:  LEKVLSIDDIMASICCER-RKKPGKRSR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown6.7e-2449.22Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRAIGFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSS
        MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR++G +LME+++ ++    S  P   Q  S L+  NLL + 
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRAIGFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSS

Query:  LEKVLSIDDIMASICCER-RKKPGKRSR
        ++  + I++I+  IC ++ +KK  KRSR
Subjt:  LEKVLSIDDIMASICCER-RKKPGKRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGT
TCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATAGGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTA
GTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAGTTTTGTCAATTGATGATATAATGGCAAGCATC
TGTTGTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGT
TCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTATAGGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTA
GTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAGTTTTGTCAATTGATGATATAATGGCAAGCATC
TGTTGTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGA
Protein sequenceShow/hide protein sequence
MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASI
CCERRKKPGKRSRPKADSRPKKKL