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CmoCh02G017190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G017190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCmo_Chr02:9837805..9838847
RNA-Seq ExpressionCmoCh02G017190
SyntenyCmoCh02G017190
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2598.36Show/hide
Query:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQNNEQNQK
        DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQN+EQNQK
Subjt:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQNNEQNQK
KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2691.04Show/hide
Query:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQNNEQNQKVIEELS
        DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQN+EQNQKV   ++
Subjt:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQNNEQNQKVIEELS
XP_021663273.1 RPM1-interacting protein 4-like [Hevea brasiliensis]1.0e-0446.43Show/hide
Query:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQ
        S DK  AVPKFGEW++ +    D YT IF KVREERQ +  + P +P  S++ + +
Subjt:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQ
XP_022887205.1 RPM1-interacting protein 4-like [Olea europaea var. sylvestris]3.6e-0551.56Show/hide
Query:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQN---SNIPDNQNNEQNQK
        D   AVPKFGEW+D D      Y+ IFTKVREERQ  G R P +P     SN+     NE NQK
Subjt:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQN---SNIPDNQNNEQNQK
XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]4.8e-1061.29Show/hide
Query:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQN-SNIPDNQNNEQNQK
        D E  VPKFGEW+DRDA  P+NYTAIF KVRE RQ+ G R  T P++ +N  +NQN+E NQK
Subjt:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQN-SNIPDNQNNEQNQK
TrEMBL top hitse value%identityAlignment
A0A067JR54 AvrRpt-cleavage domain-containing protein8.6e-0550Show/hide
Query:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNI
        S DK  AVPKFGEW++ +    D YT IF KVREERQ    + P +P  S++
Subjt:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNI
A0A0A0L950 AvrRpt-cleavage domain-containing protein3.0e-1061.19Show/hide
Query:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGAR-TPTLPQNSNIPDNQNNEQNQKVIEEL
        D E AVPKFGEW+D DA  P+NYTAIF KVREERQDQ  R TPT   +S   ++QN+EQNQK+ +++
Subjt:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGAR-TPTLPQNSNIPDNQNNEQNQKVIEEL
A0A6A6K948 AvrRpt-cleavage domain-containing protein1.1e-0446.3Show/hide
Query:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQ
        DK  AVPKFGEW++ +    D YT IF KVREERQ +  + P +P  S++ + +
Subjt:  DKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQ
A0A6A6KUD7 AvrRpt-cleavage domain-containing protein8.6e-0550Show/hide
Query:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNI
        S DK  AVPKFGEW++ +    D YT IF KVREERQ    + P +P  S++
Subjt:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNI
W1NM34 AvrRpt-cleavage domain-containing protein6.6e-0550Show/hide
Query:  MDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLP
        ++   AVPKFG W+DRD T  D +T +F KV+EERQ + A+ P +P
Subjt:  MDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLP
SwissProt top hitse value%identityAlignment
Q8GYN5 RPM1-interacting protein 41.4e-0442.86Show/hide
Query:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQ-----DQGARTPTLPQNSNIPDNQNN
        S +K   VPKFG+W++ + +  D YT IF KVREER         +RTPT  Q+S  P+N ++
Subjt:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQ-----DQGARTPTLPQNSNIPDNQNN
Arabidopsis top hitse value%identityAlignment
AT3G25070.1 RPM1 interacting protein 41.0e-0542.86Show/hide
Query:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQ-----DQGARTPTLPQNSNIPDNQNN
        S +K   VPKFG+W++ + +  D YT IF KVREER         +RTPT  Q+S  P+N ++
Subjt:  SMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQ-----DQGARTPTLPQNSNIPDNQNN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGATGATATTGATTCTTATTCAAAGACTTATATTTGTGGTGCATCTTTTAGGTCAATGGACAAAGAAGTTGCGGTTCCAAAATTTGGTGAATGGAACGACAG
GGACGCCACACCGCCAGACAACTACACAGCTATTTTCACCAAGGTGCGGGAAGAGAGACAAGACCAGGGAGCAAGGACGCCGACGCTGCCACAGAACAGTAACATCCCAG
ATAACCAAAATAATGAACAAAATCAGAAGGTAATTGAAGAACTCTCTTCCATTTCTCAGCCAACCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGATGATATTGATTCTTATTCAAAGACTTATATTTGTGGTGCATCTTTTAGGTCAATGGACAAAGAAGTTGCGGTTCCAAAATTTGGTGAATGGAACGACAG
GGACGCCACACCGCCAGACAACTACACAGCTATTTTCACCAAGGTGCGGGAAGAGAGACAAGACCAGGGAGCAAGGACGCCGACGCTGCCACAGAACAGTAACATCCCAG
ATAACCAAAATAATGAACAAAATCAGAAGGTAATTGAAGAACTCTCTTCCATTTCTCAGCCAACCACGTGAGATTACTGAGATTTGATAATGCAAATGTCTTACATTCTT
CTGTTCTTCCTCAAAATTTTCAGAAATGCTGTTGTTTTCCATGGCCAAGCAAATGATATTGTTCTTTGCATTTTCCACGTGAGATTACTTAGATTGCATGAACATGTGAG
AATAATGTAGATTATTTCATGGATCTGGCTGCAGCTCACCTCCTTCAATGCCATCTGATTGAAAGTGTTTGTCTGTGGCCAAAGTTGTAAGCAAAGACAAAATTTGATTG
TGTTGTTTGGGGTTTACAATTTTTTCTTATTTCGAGATTCATCTGTTGGATATCTATTCTTCATTTTAATAACTGTACTGTGATTTTGGTGTTATGTGTTCTTATTTAAT
GTTGTAATGTAATGTGTTCTTATTTAATGTTGTA
Protein sequenceShow/hide protein sequence
MDMDDIDSYSKTYICGASFRSMDKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGARTPTLPQNSNIPDNQNNEQNQKVIEELSSISQPTT