CuGenDBv2

Gene ID	CmoCh02G017440
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Rho GTPase-activating protein like
Genome location	Cmo_Chr02:9937744..9939492
RNA-Seq Expression	CmoCh02G017440
Synteny	CmoCh02G017440
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606331.1 hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-88

98.31

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHNLPSISSHPLERHRN TIFAHSQFLPLNSLKLRKQ FLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGT+LVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]

1.3e-74

83.62

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHN PSIS HPL RHRNPTI  HSQ LPLNSLKL++Q FL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        P+ARISV I AL+IGLFL KSVLSTA FVLAM+GAIYFIFIALNKDEGPRGGGGS+SS  STEETLEEAR+IMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

XP_022931135.1 uncharacterized protein LOC111437405 [Cucurbita moschata]

2.3e-90

100

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

XP_022996352.1 uncharacterized protein LOC111491610 [Cucurbita maxima]

3.2e-84

95.48

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHNLPSISSHPLERHRN TIFAHSQFLPLNSLKLRKQ FLW SRIGKLR R S SFPVVYAAQNNFLRVFQTVWKVGKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

XP_023532771.1 uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo]

3.8e-85

96.61

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHNLPSISSHPLERHRN TIFAHSQFLPLNSLKLRKQ FL NSRIGKLRTR SDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA2 Uncharacterized protein

3.8e-51

80.3

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHN PSIS HPL RHRNPTI  HSQ LPLNSLKL++Q FL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAM
        P+ARISV I AL+IGLFL KSVLSTA FVL +
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAM

A0A1S3BHT2 uncharacterized protein LOC103489804

5.2e-72

82.12

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHN PSIS+HPL RHRNPTI  HSQFLPLNSLKL+KQ     S+I KLR RGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT+LVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA--STEETLEEARKIMEKYK
        P+ARISV I AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRGGGGS+SS++  STEETLEEAR+IMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA--STEETLEEARKIMEKYK

A0A6J1DZ75 uncharacterized protein LOC111025970

2.6e-68

80.34

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASS LFHN  SIS HP  RHRNP IF HSQFLP NSLKL+KQ    NS+I KL  RGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGS-ASSTASTEETLEEARKIMEKYK
        P+ARISVAI A +I LFLLKSVLSTA FVLAM+GAIYF+FIALNKDEGPRGGGGS +SST STEETLEEAR+IMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGS-ASSTASTEETLEEARKIMEKYK

A0A6J1ESP6 uncharacterized protein LOC111437405

1.1e-90

100

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

A0A6J1K1P0 uncharacterized protein LOC111491610

1.5e-84

95.48

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Query:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR
        MASSCLFHNLPSISSHPLERHRN TIFAHSQFLPLNSLKLRKQ FLW SRIGKLR R S SFPVVYAAQNNFLRVFQTVWKVGKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13220.1 unknown protein

8.5e-35

54.49

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Query:  TIFAHSQFL-PLNSLKLRKQPFL-WNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPRPVARISVAIAALSIGLFLLKSV
        T F +S FL P + LKL+    L   +RI  L+ +   S  +V +AQ++FL+V +T W +GKDGIEAGT LVP SVPRPVARISV IAAL++ LF++KS 
Subjt:  TIFAHSQFL-PLNSLKLRKQPFL-WNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPRPVARISVAIAALSIGLFLLKSV

Query:  LSTAAFVLAMVGAIYFIFIALNKDEGPR-GGGGSASSTASTEETLEEARKIMEKYK
        LSTA FVL  +G  YF+FIALNKDE P+  G  ++S + S ++ LEEA+KIM+KYK
Subjt:  LSTAAFVLAMVGAIYFIFIALNKDEGPR-GGGGSASSTASTEETLEEARKIMEKYK

Sequences

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CDS sequence

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ATGGCTTCTTCGTGTCTATTTCACAATTTACCTTCAATTTCATCGCACCCATTAGAACGCCATAGAAACCCAACCATTTTCGCCCATTCGCAGTTTCTTCCTTTGAATTC
GTTGAAGCTCCGAAAACAACCTTTCCTCTGGAATTCACGAATTGGGAAGCTTAGAACTCGAGGCTCTGATTCTTTCCCTGTTGTATATGCTGCGCAGAACAATTTCTTGA
GAGTTTTTCAGACAGTTTGGAAGGTTGGAAAGGATGGGATTGAGGCAGGAACAGAGCTGGTGCCTGGCTCTGTACCAAGGCCAGTAGCAAGGATATCTGTTGCAATAGCT
GCATTATCTATTGGACTCTTTTTGCTCAAGTCAGTCCTATCTACAGCCGCATTTGTGCTGGCTATGGTGGGAGCAATTTATTTCATCTTTATAGCTTTGAATAAAGATGA
AGGGCCAAGGGGAGGTGGAGGCTCTGCCTCCTCCACAGCCTCCACAGAGGAGACTCTTGAAGAAGCCAGAAAAATAATGGAGAAGTACAAATAG

mRNA sequence

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ACCTGCTTCGTTCATCTCTCCAATTTCGCCATCGATTCAGTGTATCTGATTTATTCAAATGGCTTCTTCGTGTCTATTTCACAATTTACCTTCAATTTCATCGCACCCAT
TAGAACGCCATAGAAACCCAACCATTTTCGCCCATTCGCAGTTTCTTCCTTTGAATTCGTTGAAGCTCCGAAAACAACCTTTCCTCTGGAATTCACGAATTGGGAAGCTT
AGAACTCGAGGCTCTGATTCTTTCCCTGTTGTATATGCTGCGCAGAACAATTTCTTGAGAGTTTTTCAGACAGTTTGGAAGGTTGGAAAGGATGGGATTGAGGCAGGAAC
AGAGCTGGTGCCTGGCTCTGTACCAAGGCCAGTAGCAAGGATATCTGTTGCAATAGCTGCATTATCTATTGGACTCTTTTTGCTCAAGTCAGTCCTATCTACAGCCGCAT
TTGTGCTGGCTATGGTGGGAGCAATTTATTTCATCTTTATAGCTTTGAATAAAGATGAAGGGCCAAGGGGAGGTGGAGGCTCTGCCTCCTCCACAGCCTCCACAGAGGAG
ACTCTTGAAGAAGCCAGAAAAATAATGGAGAAGTACAAATAG

Protein sequence

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MASSCLFHNLPSISSHPLERHRNPTIFAHSQFLPLNSLKLRKQPFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTELVPGSVPRPVARISVAIA
ALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK

CmoCh02G017440 (gene) of Cucurbita moschata (Rifu) v1 genome