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CmoCh02G017920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G017920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr02:10193562..10194991
RNA-Seq ExpressionCmoCh02G017920
SyntenyCmoCh02G017920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1878502.1 hypothetical protein Lal_00047171 [Lupinus albus]2.5e-0556.9Show/hide
Query:  KKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFL
        K  +R  KIK+ +SI+AIV+ Q  S+I IALS   +L+NH+LPF FINLKDHI+I+ L
Subjt:  KKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFL

KYP70733.1 hypothetical protein KK1_009961, partial [Cajanus cajan]1.4e-0549.23Show/hide
Query:  EQYSNKKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL
        E ++    +R  +IK+ +SI+AI+  Q  S+I IALSR  +L+NH+ PFLFINLKDHI+++ L L
Subjt:  EQYSNKKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL

KYP74655.1 hypothetical protein KK1_007341, partial [Cajanus cajan]2.1e-0450.88Show/hide
Query:  VRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL
        +RCHKIK+ +SI+AI+  Q  SEI IALSR ++  NH+L    I+ K+HI+++FL L
Subjt:  VRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL

TrEMBL top hitse value%identityAlignment
A0A0V0HJX5 Putative ovule protein2.7e-1038.57Show/hide
Query:  HLCRVSSLDLIVNAIQLMSKVVFRCCIEHLGTDSRARWRPEVHTNNPEDHDLCSVKSNAYAPEEGSKMLCCGQTNEQYSNKKFVRCHKIKIINSIAAIVV
        +  RVSSL+LIV A QL  + V RC I+HL +DS  R RP                      EE   +L              VRCH++ I+  I+A+++
Subjt:  HLCRVSSLDLIVNAIQLMSKVVFRCCIEHLGTDSRARWRPEVHTNNPEDHDLCSVKSNAYAPEEGSKMLCCGQTNEQYSNKKFVRCHKIKIINSIAAIVV

Query:  GQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL
         +S SEI IALS  ++ +NH+L FL IN K HIS+H L L
Subjt:  GQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL

A0A151TUK2 Uncharacterized protein (Fragment)7.0e-0649.23Show/hide
Query:  EQYSNKKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL
        E ++    +R  +IK+ +SI+AI+  Q  S+I IALSR  +L+NH+ PFLFINLKDHI+++ L L
Subjt:  EQYSNKKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL

A0A151U5R5 Uncharacterized protein (Fragment)1.0e-0450.88Show/hide
Query:  VRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL
        +RCHKIK+ +SI+AI+  Q  SEI IALSR ++  NH+L    I+ K+HI+++FL L
Subjt:  VRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL

A0A6A5N5Y8 Uncharacterized protein1.2e-0556.9Show/hide
Query:  KKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFL
        K  +R  KIK+ +SI+AIV+ Q  S+I IALS   +L+NH+LPF FINLKDHI+I+ L
Subjt:  KKFVRCHKIKIINSIAAIVVGQSSSEIFIALSRIANLVNHHLPFLFINLKDHISIHFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTTGCAGACAGGTCCATCTCTGCAGGGTCAGTAGCTTGGATCTCATAGTGAATGCCATCCAGCTCATGTCGAAAGTTGTCTTTAGATGTTGCATAGAGCATCT
TGGCACGGATTCGAGAGCTCGCTGGAGACCTGAAGTGCACACCAATAACCCTGAAGATCATGACTTGTGCAGTGTGAAGAGTAATGCATATGCACCAGAAGAAGGTTCCA
AAATGTTGTGTTGTGGGCAAACCAATGAACAATATAGCAATAAGAAATTTGTCAGATGTCACAAAATCAAAATCATAAACAGCATAGCGGCAATCGTTGTCGGGCAGAGC
AGCAGTGAAATCTTCATAGCTCTCAGCAGGATTGCCAATCTTGTCAACCACCACCTCCCTTTTCTTTTCATCAACCTTAAAGATCACATATCTATACATTTTCTTTCTCT
GTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCTTTGCAGACAGGTCCATCTCTGCAGGGTCAGTAGCTTGGATCTCATAGTGAATGCCATCCAGCTCATGTCGAAAGTTGTCTTTAGATGTTGCATAGAGCATCT
TGGCACGGATTCGAGAGCTCGCTGGAGACCTGAAGTGCACACCAATAACCCTGAAGATCATGACTTGTGCAGTGTGAAGAGTAATGCATATGCACCAGAAGAAGGTTCCA
AAATGTTGTGTTGTGGGCAAACCAATGAACAATATAGCAATAAGAAATTTGTCAGATGTCACAAAATCAAAATCATAAACAGCATAGCGGCAATCGTTGTCGGGCAGAGC
AGCAGTGAAATCTTCATAGCTCTCAGCAGGATTGCCAATCTTGTCAACCACCACCTCCCTTTTCTTTTCATCAACCTTAAAGATCACATATCTATACATTTTCTTTCTCT
GTAG
Protein sequenceShow/hide protein sequence
MHLCRQVHLCRVSSLDLIVNAIQLMSKVVFRCCIEHLGTDSRARWRPEVHTNNPEDHDLCSVKSNAYAPEEGSKMLCCGQTNEQYSNKKFVRCHKIKIINSIAAIVVGQS
SSEIFIALSRIANLVNHHLPFLFINLKDHISIHFLSL