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CmoCh02G018030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbet1-like SNARE 1-1
Genome locationCmo_Chr02:10229865..10232067
RNA-Seq ExpressionCmoCh02G018030
SyntenyCmoCh02G018030
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606386.1 Bet1-like SNARE 1-1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-58100Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLTS
        SPKMFSLVVLFVAIFFIVYYLTS
Subjt:  SPKMFSLVVLFVAIFFIVYYLTS

XP_022146012.1 bet1-like SNARE 1-1 [Momordica charantia]8.1e-5595.08Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRV+LFDGIEEGGVRASSS+SSHEIEE DNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLV LFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

XP_022931255.1 bet1-like SNARE 1-1 [Cucurbita moschata]1.8e-57100Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLVVLFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

XP_022995699.1 bet1-like SNARE 1-1 [Cucurbita maxima]5.1e-5799.18Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNR+LDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLVVLFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

XP_038887294.1 bet1-like SNARE 1-1 [Benincasa hispida]3.7e-5595.9Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEE DNE AL+GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLV LFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

TrEMBL top hitse value%identityAlignment
A0A6J1CYB1 bet1-like SNARE 1-13.9e-5595.08Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRV+LFDGIEEGGVRASSS+SSHEIEE DNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLV LFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

A0A6J1EYY0 bet1-like SNARE 1-18.5e-58100Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLVVLFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

A0A6J1HIJ8 bet1-like SNARE 1-12.0e-5495.08Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEE DNE AL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
         PKMFSLV LFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

A0A6J1HRZ5 bet1-like SNARE 1-12.0e-5495.08Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEE DNE AL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
         PKMFSLV LFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

A0A6J1K6N8 bet1-like SNARE 1-12.5e-5799.18Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNR+LDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        SPKMFSLVVLFVAIFFIVYYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

SwissProt top hitse value%identityAlignment
O15155 BET1 homolog7.3e-0631.9Show/hide
Query:  RVSLFDGIEEGGV----RASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFS
        R  L +G+  G       A+S YS+    E++NE   E L+ +V  +K L+ +I  EV++ N++L  M +  DS+ G L  TM + K +    S  K+  
Subjt:  RVSLFDGIEEGGV----RASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFS

Query:  LVVLF-VAIFFIVYYL
         ++LF + +FFI+Y++
Subjt:  LVVLF-VAIFFIVYYL

O35152 BET1-like protein6.6e-0735.29Show/hide
Query:  RASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MFSLVVLFVAIFFIVYYL
        RA SS +  EI +++N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF TV       +  +  + V+ +  FFI+ YL
Subjt:  RASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MFSLVVLFVAIFFIVYYL

Query:  TS
         S
Subjt:  TS

O35153 BET1-like protein3.3e-0634.31Show/hide
Query:  RASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMF-SLVVLFVAIFFIVYYL
        RA SS +  +I +++N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF T+    + + K+   + V+ +  FFI+ YL
Subjt:  RASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMF-SLVVLFVAIFFIVYYL

Query:  TS
         S
Subjt:  TS

Q94CG2 Bet1-like SNARE 1-22.2e-3159.68Show/hide
Query:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R SLF   DG+EEG +RASSSY+    +E+DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSSPKMFSLVVLFVAIFFIVYYL
         KS+ K   L+  FV +F I+YYL
Subjt:  PKSSPKMFSLVVLFVAIFFIVYYL

Q9M2J9 Bet1-like SNARE 1-18.8e-4475.41Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R SLFDGIEEGG+RA+SSY SHEI E +NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        S +M +LV  FV +F ++YYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A6.2e-4575.41Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R SLFDGIEEGG+RA+SSY SHEI E +NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVVLFVAIFFIVYYLT
        S +M +LV  FV +F ++YYLT
Subjt:  SPKMFSLVVLFVAIFFIVYYLT

AT4G14455.1 Target SNARE coiled-coil domain protein1.6e-3259.68Show/hide
Query:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R SLF   DG+EEG +RASSSY+    +E+DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSSPKMFSLVVLFVAIFFIVYYL
         KS+ K   L+  FV +F I+YYL
Subjt:  PKSSPKMFSLVVLFVAIFFIVYYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCCAGAAGGGAACTACGTAACAATAGGGTTTCTCTCTTTGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCATCTTCATACTCCTCCCATGAAATTGAGGAACA
GGATAATGAAACAGCATTGGAAGGCTTGCAAGACAGAGTCCTTCTATTGAAAAGGTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAACCGCATGCTGGATAGGA
TGGGTAATGATATGGATTCATCAAGGGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTTGATCCGAAGTCGAGCCCGAAGATGTTCTCGCTAGTCGTACTT
TTCGTGGCAATTTTCTTCATTGTGTACTATCTCACAAGTTGGAAAGAGTTTGGAACCAAAATATCATCTGCAGCTCTCCATCAAGCTGACATTGATGAATATAATCAGCA
AGCCAGTTTGTTACACCAGAGTTTTATCTGCCTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGCCAGAAGGGAACTACGTAACAATAGGGTTTCTCTCTTTGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCATCTTCATACTCCTCCCATGAAATTGAGGAACA
GGATAATGAAACAGCATTGGAAGGCTTGCAAGACAGAGTCCTTCTATTGAAAAGGTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAACCGCATGCTGGATAGGA
TGGGTAATGATATGGATTCATCAAGGGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTTGATCCGAAGTCGAGCCCGAAGATGTTCTCGCTAGTCGTACTT
TTCGTGGCAATTTTCTTCATTGTGTACTATCTCACAAGTTGGAAAGAGTTTGGAACCAAAATATCATCTGCAGCTCTCCATCAAGCTGACATTGATGAATATAATCAGCA
AGCCAGTTTGTTACACCAGAGTTTTATCTGCCTTCCCTGA
Protein sequenceShow/hide protein sequence
MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEQDNETALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVVL
FVAIFFIVYYLTSWKEFGTKISSAALHQADIDEYNQQASLLHQSFICLP