; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G018050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC2H2-type zinc finger protein-like protein
Genome locationCmo_Chr02:10238027..10238527
RNA-Seq ExpressionCmoCh02G018050
SyntenyCmoCh02G018050
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606388.1 Zinc finger protein 11, partial [Cucurbita argyrosperma subsp. sororia]9.3e-8698.1Show/hide
Query:  MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENS
        MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS RP+IENS
Subjt:  MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENS

Query:  SLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
        SLTCIEGSGSCSRSNEGD DADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
Subjt:  SLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

KAG7036327.1 Zinc finger protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-9098.19Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
         RP+IENSSLTCIEGSGSCSRSNEGD DADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
Subjt:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

XP_022931180.1 transcriptional regulator SUPERMAN-like [Cucurbita moschata]1.8e-92100Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
        SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
Subjt:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

XP_022996108.1 transcriptional regulator SUPERMAN-like [Cucurbita maxima]3.3e-7585.21Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        M+GGK+RSMSNGKVVKNEEQQWGFGKQETFSSDQFL WPARKY+CNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIEGSG---SCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
         RP+IENSSLTCI+GSG   S     + D DADVDGVKKKRKKGSV       NLVGCSSEDLDLELHL
Subjt:  SRPSIENSSLTCIEGSG---SCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

XP_023534298.1 transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]3.8e-8795.81Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        MEGG++RSMSNGKVVKNEEQQWGF KQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGV-KKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
         RPSIENSSL+CIEGSGSCSRSNEGD DADVDGV KKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
Subjt:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGV-KKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

TrEMBL top hitse value%identityAlignment
A0A1S3C0E4 transcriptional regulator SUPERMAN-like1.1e-2846.73Show/hide
Query:  MEGGKHRS--MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSY-------PTPSFCL
        M+ G + S   +NGK  + ++QQ G+ K+ TFSS++F  WPA+ Y CNFC+REFKSAQALGGHMNVHRRDR R+R   SW+ +N+Y       P P+F  
Subjt:  MEGGKHRS--MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSY-------PTPSFCL

Query:  PPPPPSCFSSRPSIENSSLTCI------EGSGSCSRSNE----------------GDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSS--EDLDLELHL
        P   PSCF+ R S   +SL         +  GSCS +N                 GD    V  V KK+KK  VNLE KMG+L   SS  EDLDLELHL
Subjt:  PPPPPSCFSSRPSIENSSLTCI------EGSGSCSRSNE----------------GDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSS--EDLDLELHL

A0A5D3B8Q5 Transcriptional regulator SUPERMAN-like1.1e-2846.73Show/hide
Query:  MEGGKHRS--MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSY-------PTPSFCL
        M+ G + S   +NGK  + ++QQ G+ K+ TFSS++F  WPA+ Y CNFC+REFKSAQALGGHMNVHRRDR R+R   SW+ +N+Y       P P+F  
Subjt:  MEGGKHRS--MSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSY-------PTPSFCL

Query:  PPPPPSCFSSRPSIENSSLTCI------EGSGSCSRSNE----------------GDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSS--EDLDLELHL
        P   PSCF+ R S   +SL         +  GSCS +N                 GD    V  V KK+KK  VNLE KMG+L   SS  EDLDLELHL
Subjt:  PPPPPSCFSSRPSIENSSLTCI------EGSGSCSRSNE----------------GDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSS--EDLDLELHL

A0A6J1EYR4 transcriptional regulator SUPERMAN-like8.5e-93100Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
        SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
Subjt:  SRPSIENSSLTCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

A0A6J1HH25 zinc finger protein 11-like2.1e-3050Show/hide
Query:  MSNGKVVKNEEQQ-------WGF-GKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        M  GK++ N+++Q       W F  K ETFS +QF  WPA+ Y+CNFC+REFKSAQALGGHMNVHRRDR R+R   SWM +NSYP P+        SCF+
Subjt:  MSNGKVVKNEEQQ-------WGF-GKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIE----GSGSCSRSN-------EGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSS-EDLDLELHL
         + +  NS  +  +      GSCS +N       + D D  +  +KKK+KK  VNLE KMGNL   SS EDLDLELHL
Subjt:  SRPSIENSSLTCIE----GSGSCSRSN-------EGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSS-EDLDLELHL

A0A6J1K9X4 transcriptional regulator SUPERMAN-like1.6e-7585.21Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
        M+GGK+RSMSNGKVVKNEEQQWGFGKQETFSSDQFL WPARKY+CNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFS

Query:  SRPSIENSSLTCIEGSG---SCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL
         RP+IENSSLTCI+GSG   S     + D DADVDGVKKKRKKGSV       NLVGCSSEDLDLELHL
Subjt:  SRPSIENSSLTCIEGSG---SCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.2e-1245.45Show/hide
Query:  NEEQQWGFGKQETFSSDQFLH--WPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENSSLTCI
        N+E  W   ++  F+ D      WP R YTC+FCRREFKSAQALGGHMNVHRRDR RL+       ++ Y  P     P  PS   S    E S  T +
Subjt:  NEEQQWGFGKQETFSSDQFLH--WPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENSSLTCI

Q38895 Transcriptional regulator SUPERMAN1.3e-1340Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQ----FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPP
        ME      + N    +     W +G  +    D        WP R YTC+FC+REF+SAQALGGHMNVHRRDR RLR   S   ++S P+P +  P    
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQ----FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPP

Query:  SCFSSRPSIENSSLT
        S  ++ P   +S LT
Subjt:  SCFSSRPSIENSSLT

Q9LHS9 Probable transcriptional regulator RABBIT EARS8.4e-1345.24Show/hide
Query:  RSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFC
        R  S+G +     ++  F   E +       WP R Y+C+FC REFKSAQALGGHMNVHRRDR RL+  S    +    TP  C
Subjt:  RSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFC

Q9SLB8 Zinc finger protein 117.6e-1443.69Show/hide
Query:  SMSNGKVVKNEEQQWGFGKQETFSSDQ------FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSS
        S SN    + EE + G G      +         + WP + YTC+FCRREF+SAQALGGHMNVHRRDR +LR   SW+    + TP   +  P P+  SS
Subjt:  SMSNGKVVKNEEQQWGFGKQETFSSDQ------FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSS

Query:  RPS
          S
Subjt:  RPS

Q9SR34 Transcriptional regulator TAC12.4e-0767.65Show/hide
Query:  ARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLR
        +R Y C+FC R F +AQALGGHMN+HRRDR +LR
Subjt:  ARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 102.3e-1345.45Show/hide
Query:  NEEQQWGFGKQETFSSDQFLH--WPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENSSLTCI
        N+E  W   ++  F+ D      WP R YTC+FCRREFKSAQALGGHMNVHRRDR RL+       ++ Y  P     P  PS   S    E S  T +
Subjt:  NEEQQWGFGKQETFSSDQFLH--WPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENSSLTCI

AT2G42410.1 zinc finger protein 115.4e-1543.69Show/hide
Query:  SMSNGKVVKNEEQQWGFGKQETFSSDQ------FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSS
        S SN    + EE + G G      +         + WP + YTC+FCRREF+SAQALGGHMNVHRRDR +LR   SW+    + TP   +  P P+  SS
Subjt:  SMSNGKVVKNEEQQWGFGKQETFSSDQ------FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSS

Query:  RPS
          S
Subjt:  RPS

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein9.2e-1540Show/hide
Query:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQ----FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPP
        ME      + N    +     W +G  +    D        WP R YTC+FC+REF+SAQALGGHMNVHRRDR RLR   S   ++S P+P +  P    
Subjt:  MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQ----FLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPP

Query:  SCFSSRPSIENSSLT
        S  ++ P   +S LT
Subjt:  SCFSSRPSIENSSLT

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein5.0e-1354.1Show/hide
Query:  VKNEEQQWGFG--KQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLR
        ++++++ W     +Q+T  +     WP R YTCNFCRREF+SAQALGGHMNVHRRDR   R
Subjt:  VKNEEQQWGFG--KQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLR

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein5.9e-1445.24Show/hide
Query:  RSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFC
        R  S+G +     ++  F   E +       WP R Y+C+FC REFKSAQALGGHMNVHRRDR RL+  S    +    TP  C
Subjt:  RSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGGTAAGCACAGGAGCATGAGTAATGGGAAGGTTGTGAAGAATGAAGAACAACAATGGGGCTTTGGCAAACAAGAAACATTTTCAAGCGATCAATTTCTCCA
TTGGCCTGCAAGAAAATACACTTGTAATTTTTGCAGGAGGGAATTCAAATCTGCTCAAGCTCTGGGAGGGCATATGAATGTTCACAGAAGGGATAGGGGAAGATTGAGAT
ATTGGTCTTCTTGGATGCATAACAATTCATACCCTACCCCTAGTTTCTGTTTGCCGCCTCCACCGCCATCTTGCTTCAGTTCCAGACCAAGTATTGAGAACAGCTCCTTG
ACTTGCATTGAGGGAAGTGGGAGCTGTTCAAGGAGCAATGAAGGAGATGGAGATGCTGATGTTGATGGGGTGAAGAAGAAGAGGAAGAAAGGTTCAGTTAATTTGGAGGG
GAAGATGGGGAATTTGGTAGGTTGTTCAAGTGAGGATCTGGATTTGGAGCTACATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGGTAAGCACAGGAGCATGAGTAATGGGAAGGTTGTGAAGAATGAAGAACAACAATGGGGCTTTGGCAAACAAGAAACATTTTCAAGCGATCAATTTCTCCA
TTGGCCTGCAAGAAAATACACTTGTAATTTTTGCAGGAGGGAATTCAAATCTGCTCAAGCTCTGGGAGGGCATATGAATGTTCACAGAAGGGATAGGGGAAGATTGAGAT
ATTGGTCTTCTTGGATGCATAACAATTCATACCCTACCCCTAGTTTCTGTTTGCCGCCTCCACCGCCATCTTGCTTCAGTTCCAGACCAAGTATTGAGAACAGCTCCTTG
ACTTGCATTGAGGGAAGTGGGAGCTGTTCAAGGAGCAATGAAGGAGATGGAGATGCTGATGTTGATGGGGTGAAGAAGAAGAGGAAGAAAGGTTCAGTTAATTTGGAGGG
GAAGATGGGGAATTTGGTAGGTTGTTCAAGTGAGGATCTGGATTTGGAGCTACATCTTTAA
Protein sequenceShow/hide protein sequence
MEGGKHRSMSNGKVVKNEEQQWGFGKQETFSSDQFLHWPARKYTCNFCRREFKSAQALGGHMNVHRRDRGRLRYWSSWMHNNSYPTPSFCLPPPPPSCFSSRPSIENSSL
TCIEGSGSCSRSNEGDGDADVDGVKKKRKKGSVNLEGKMGNLVGCSSEDLDLELHL