; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G018130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhistone H1
Genome locationCmo_Chr02:10267837..10272321
RNA-Seq ExpressionCmoCh02G018130
SyntenyCmoCh02G018130
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606395.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]1.0e-11095.93Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
        LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+ AAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA

Query:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAK
        SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAV      KKAPAKS  AKKVKSPARK+PARRAK
Subjt:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAK

KAG7036335.1 Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma]8.5e-11396.68Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
        LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA

Query:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAV      KKAPAKSV AKKVKSPARK+PARRAKK
Subjt:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

XP_022930932.1 histone H1 [Cucurbita moschata]6.1e-119100Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
        LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA

Query:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

XP_022995180.1 histone H1 [Cucurbita maxima]1.2e-11497.43Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSK+PKEKKP AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP VKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

XP_023533642.1 histone H1 [Cucurbita pepo subsp. pepo]9.8e-11798.53Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP--AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKK
        MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSK+PKEKKP  AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKK
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP--AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKK

Query:  LLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
        LLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
Subjt:  LLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK

Query:  AASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  AASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

TrEMBL top hitse value%identityAlignment
A0A1S3BL93 histone H15.2e-10087.5Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPTNAE AEENP NKAAKSKKSK+PKEKKPAA RK RNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LFHLKKLVASGKLVKVKSSFKLK AKSA+VKPASPA K+P AAKPK KA AK KAVAKS AKPKAAAKPKPKT AKPKAA KPK    KSKSS VAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKP VKKAPA+KKAP+KSV AKKVKS A+KAP++R  K
Subjt:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A5A7UQL0 Histone H15.2e-10087.5Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPTNAE AEENP NKAAKSKKSK+PKEKKPAA RK RNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LFHLKKLVASGKLVKVKSSFKLK AKSA+VKPASPA K+P AAKPK KA AK KAVAKS AKPKAAAKPKPKT AKPKAA KPK    KSKSS VAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKP VKKAPA+KKAP+KSV AKKVKS A+KAP++R  K
Subjt:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A6J1CWP2 histone H11.3e-10389.34Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPT+AE AEENP NKAAKSKKSK+PKEKKPAA RK RNPPTHPPYEEMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LFHLKKLVASGKLVKVKSSFKLK AKSA+VKP SPA K+PAAAKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA KPKP  AKSKSS VAKPKA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAK +RTSTRTSPG++APAPKPA KKAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Subjt:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A6J1ES19 histone H13.0e-119100Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
        MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLL

Query:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
        LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA
Subjt:  LFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAA

Query:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  SKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A6J1K3E6 histone H15.8e-11597.43Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSK+PKEKKP AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP VKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  ASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

SwissProt top hitse value%identityAlignment
P08283 Histone H15.0e-4757.25Show/hide
Query:  MATEEPVVPVESAAEP------TNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        MATEEP+V VE+  EP      T  EP         A+ +K+K+ K  KP  A K RNP +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEKQKQLP+
Subjt:  MATEEPVVPVESAAEP------TNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAV-AKSSAKPKAAAKPKPKTAAKPKA-AAKPKPTAAKSKSS
        NFKKLLL +LKK VASGKL+KVK SFKL +A          AK+PA AKPK K AAK K+V AK +AKPKA A  KPK A+K KA AAKPK  AAK K+ 
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAV-AKSSAKPKAAAKPKPKTAAKPKA-AAKPKPTAAKSKSS

Query:  VVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARR
               A+K KA  KPK+K KPAK ++TS +T+PGKK      AVKK  A+KK P KSV AK VKSP +K   +R
Subjt:  VVAKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARR

P23444 Histone H12.0e-3250Show/hide
Query:  TEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKLLL
        TE P   V++A E     PA       AAK+KK+  PK+         R  PTH PY EM+ +AI +LKERTGSS YAI KF+E+K K +LP NF+KLL 
Subjt:  TEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKLLL

Query:  FHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPK-PTAAKSKSSVVAKPKAA
          LKKLVA GKL KVK+S+KL SA     KP +  K+P     KPKAAAK K  AK+ AK K A KPKP  AAKPKA  KPK P   K+K +  AKPK A
Subjt:  FHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPK-PTAAKSKSSVVAKPKAA

Query:  SKTKAAPKPKAKEK-PAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
            A PKP AK+   AKA++TS + +PGKKAPA K A               P+KK  +P RKAP+R+AKK
Subjt:  SKTKAAPKPKAKEK-PAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

P26568 Histone H1.12.2e-3453.05Show/hide
Query:  SAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS
        +A  P      E+ PA K  K+K  K+ KEKK  AAA K R   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVAS
Subjt:  SAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS

Query:  GKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKAA-PKP
        GKLVKVK+SFKL SA +    P + A++ A AK KP     T AV K+  K  AA+K K   A KPK AA  K TA      V     AA+K KA   KP
Subjt:  GKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKAA-PKP

Query:  KAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK
        KAK +PAKA++T+  TSP KKA A    V      KK P K  V  K VKSPA++A +R  K
Subjt:  KAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK

P26569 Histone H1.21.2e-4559.09Show/hide
Query:  MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKSKQPK-EKKP---AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        M+ EE  VP  V+S A  T  +  E+ PA K  KSKK+   K  KKP   AA  K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKSKQPK-EKKP---AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKRPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA
         F+KLLL +LK+LVAS KLVKVK+SFK+ SA+SA   KPA+P K+ A    KPK       A AK KA AK + KP A    K K  AKPKA    K TA
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKRPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA

Query:  AKSKSSVVAKPKAASKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AK KS  VA   A SKTKA A KPKAKE+PAKASRTSTRTSPGKK  AP    KK   +KKAPAKSV   KVKSPA++A  R+AKK
Subjt:  AKSKSSVVAKPKAASKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

P37218 Histone H13.9e-4456.8Show/hide
Query:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKS-KKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPV+ V    E   A    ++ AN  AKS K  K+ K KKPAA RK    PTHPPY EMIKDAIVTLKERTGSSQ+AITKFIEEKQK LPSNFKKL
Subjt:  MATEEPVVPVESAAEPTNAEPAEENPANKAAKS-KKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAK----PKPKAAAKTKAVAKSSAKPKAAAKP--------KPKTAAKPKAAAKPKPTA-
        LL  LKK VAS KLVKVK+S+KL S            K+PAAAK     KPKAA K KA   + AKP A AKP        K K AAK K AAK KP A 
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAK----PKPKAAAKTKAVAKSSAKPKAAAKP--------KPKTAAKPKAAAKPKPTA-

Query:  AKSKSSVVAKPKAA-------SKTKAAPKP--KAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AK K++  AKPKAA       +KTKAA KP  KAK   AK ++T+TRT+P +KA AP     KA  +KK P K  PAK VKSPA+KA  +R +K
Subjt:  AKSKSSVVAKPKAA-------SKTKAAPKP--KAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein1.5e-3553.05Show/hide
Query:  SAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS
        +A  P      E+ PA K  K+K  K+ KEKK  AAA K R   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVAS
Subjt:  SAAEPTNAEPAEENPANKAAKSKKSKQPKEKKP-AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS

Query:  GKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKAA-PKP
        GKLVKVK+SFKL SA +    P + A++ A AK KP     T AV K+  K  AA+K K   A KPK AA  K TA      V     AA+K KA   KP
Subjt:  GKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKAA-PKP

Query:  KAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK
        KAK +PAKA++T+  TSP KKA A    V      KK P K  V  K VKSPA++A +R  K
Subjt:  KAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK

AT2G18050.1 histone H1-31.9e-0941.07Show/hide
Query:  KKPAAARKTRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKR
        KK  AA+K R P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL      I +      +
Subjt:  KKPAAARKTRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKR

Query:  PAAAKPKPKAAAKTKAVAKSSAKP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKA
              K +    TK    SS +P K  +  K +   K K A +P     KS  S V K KA   + A
Subjt:  PAAAKPKPKAAAKTKAVAKSSAKP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKA

AT2G18050.2 histone H1-31.1e-0439.04Show/hide
Query:  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSA
        MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL      I +      +      K +    TK    SS 
Subjt:  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSA

Query:  KP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKA
        +P K  +  K +   K K A +P     KS  S V K KA   + A
Subjt:  KP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein8.7e-4759.09Show/hide
Query:  MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKSKQPK-EKKP---AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        M+ EE  VP  V+S A  T  +  E+ PA K  KSKK+   K  KKP   AA  K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKSKQPK-EKKP---AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKRPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA
         F+KLLL +LK+LVAS KLVKVK+SFK+ SA+SA   KPA+P K+ A    KPK       A AK KA AK + KP A    K K  AKPKA    K TA
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKRPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA

Query:  AKSKSSVVAKPKAASKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AK KS  VA   A SKTKA A KPKAKE+PAKASRTSTRTSPGKK  AP    KK   +KKAPAKSV   KVKSPA++A  R+AKK
Subjt:  AKSKSSVVAKPKAASKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.8e-3147.65Show/hide
Query:  MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKSKQPK-EKKP---AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        M+ EE  VP  V+S A  T  +  E+ PA K  KSKK+   K  KKP   AA  K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTNAEPAEENPANKAAKSKKSKQPK-EKKP---AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVV
         F+KLLL +LK+LVAS KLVKVK+SFK+ SA+S             AA PKP A  K KA                                     +VV
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVV

Query:  AKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AKP                   KASRTSTRTSPGKK  AP    KK   +KKAPAKSV   KVKSPA++A  R+AKK
Subjt:  AKPKAASKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCGGCAGAGCCGACCAACGCTGAACCAGCAGAAGAGAATCCAGCTAACAAGGCCGCGAAGTCGAAGAAGTCCAA
ACAACCTAAAGAGAAGAAGCCTGCTGCTGCTAGAAAAACTAGAAATCCTCCAACTCATCCTCCGTATGAAGAGATGATTAAGGATGCAATCGTCACGTTGAAAGAGAGAA
CTGGTTCGAGTCAGTATGCGATCACCAAATTTATTGAGGAGAAGCAGAAACAACTTCCTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCTTCC
GGGAAGCTGGTGAAGGTTAAGAGTTCATTTAAGCTTAAGTCGGCGAAGTCGGCGATTGTGAAACCTGCTTCTCCTGCCAAGAGGCCTGCAGCTGCGAAGCCTAAGCCAAA
AGCGGCCGCCAAGACTAAGGCTGTGGCCAAATCTTCAGCGAAGCCGAAAGCCGCTGCAAAGCCGAAGCCGAAGACGGCTGCCAAGCCTAAGGCTGCTGCTAAACCTAAGC
CTACGGCAGCCAAGTCAAAGAGCAGTGTTGTTGCGAAGCCCAAAGCTGCATCGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGCTTCAAGG
ACATCGACGAGAACCTCACCAGGGAAGAAGGCACCAGCTCCGAAACCGGCGGTGAAGAAGGCACCGGCGTCCAAGAAGGCACCGGCAAAAAGTGTTCCGGCTAAGAAAGT
GAAATCGCCGGCAAGAAAGGCTCCTGCTAGAAGAGCAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CTCGCAACTAAATTACCAGTAAGATATCAAATAGCTTCCATCTCTTGGCTGTACATCCCAATTTCATCCCGATTGTTTTCACTTGCCAACTCAATTCTTCTGTTCGTAAA
CCCTAATCTTGCTTTTGGATTGTGGGATTTGATTTGATCTCTTTTCTACTCCAATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCGGCAGAGCCGACCAACGCT
GAACCAGCAGAAGAGAATCCAGCTAACAAGGCCGCGAAGTCGAAGAAGTCCAAACAACCTAAAGAGAAGAAGCCTGCTGCTGCTAGAAAAACTAGAAATCCTCCAACTCA
TCCTCCGTATGAAGAGATGATTAAGGATGCAATCGTCACGTTGAAAGAGAGAACTGGTTCGAGTCAGTATGCGATCACCAAATTTATTGAGGAGAAGCAGAAACAACTTC
CTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCTTCCGGGAAGCTGGTGAAGGTTAAGAGTTCATTTAAGCTTAAGTCGGCGAAGTCGGCGATT
GTGAAACCTGCTTCTCCTGCCAAGAGGCCTGCAGCTGCGAAGCCTAAGCCAAAAGCGGCCGCCAAGACTAAGGCTGTGGCCAAATCTTCAGCGAAGCCGAAAGCCGCTGC
AAAGCCGAAGCCGAAGACGGCTGCCAAGCCTAAGGCTGCTGCTAAACCTAAGCCTACGGCAGCCAAGTCAAAGAGCAGTGTTGTTGCGAAGCCCAAAGCTGCATCGAAGA
CTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAGAAGCCTGCCAAGGCTTCAAGGACATCGACGAGAACCTCACCAGGGAAGAAGGCACCAGCTCCGAAACCGGCGGTGAAG
AAGGCACCGGCGTCCAAGAAGGCACCGGCAAAAAGTGTTCCGGCTAAGAAAGTGAAATCGCCGGCAAGAAAGGCTCCTGCTAGAAGAGCAAAGAAGTAAAGGAAATAGAA
GGAATCTAGCATTCGTAGCGGCGGTCCTGTAAATCCGTTATCGTACTGGGTGTATCGACCCTTACATGCCGTGCTATAGAGGAGTTTTACTTTTCGAATTTTTCTTTTAT
TTGTTTATTTGGTAGACCTTTCACAAAGATGATGTATCGCTCAGCTTAGTTTTAATGGAAATTGTGTTATCAATTAGGAGCGTCGATTTCGGTTCTCAACCAGTGATTTC
AATGGGCAATGCAACTTCGTTGATTACCTGGAAACGTTTCGATTCTCTTGCGCTAGAAATGGATATGGATTGCGTAACCGAAGTCTAGCTTCGTTGCTAAGCTTGGATAT
TATACGTCTGCTGTTCTGCTACTGGTAACAGAGCATGGTAGAGAGACTTGCTTGATTTTGGCTAATTCACCAGGAATGCTTATCTTAAGACGTTCCTTTTAGTGTTGAGC
AGGTCGTTTGGGCTTTAAGATCTCTGTTTAATTTGGTAACAGTTATCTGAATGTTGTCCGATTAGGTTCTAACGTACAACTAGGATGGGGTGAGTTGTACGGGGTGTTTT
GAAGTTATGAAATTGTTTCAGCTTGCATCAACCTTCATCAGCATGCTCCGTACCTCATAATTTCCTCATCTCCTCTTCGAGCGATGAGCAGATGTGCGTAGCCGCAATAT
CTAATCTGTTGCCACCATTTGTACTGTGCGCTTGTTTTTATTTCTTCTTTGCGTGTGTCTATGTGATTTGTATAAAACAATTATCGAATAGATTGATCATTTCTTATTTA
GACAGAATTCAGT
Protein sequenceShow/hide protein sequence
MATEEPVVPVESAAEPTNAEPAEENPANKAAKSKKSKQPKEKKPAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS
GKLVKVKSSFKLKSAKSAIVKPASPAKRPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAASKTKAAPKPKAKEKPAKASR
TSTRTSPGKKAPAPKPAVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK