; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G018210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbeta-carotene isomerase D27, chloroplastic
Genome locationCmo_Chr02:10310328..10314532
RNA-Seq ExpressionCmoCh02G018210
SyntenyCmoCh02G018210
Gene Ontology termsGO:0010223 - secondary shoot formation (biological process)
GO:1901601 - strigolactone biosynthetic process (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0016859 - cis-trans isomerase activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR002119 - Histone H2A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold
IPR025114 - Beta-carotene isomerase D27-like, C-terminal
IPR038938 - Beta-carotene isomerase D27-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606402.1 Beta-carotene isomerase D27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.5e-16199.32Show/hide
Query:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
        MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
Subjt:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL

Query:  AIRGDEELDTLIKGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF
        AIRGDEELDTLIKGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQRE MIEALQRAF
Subjt:  AIRGDEELDTLIKGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF

Query:  PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPN
        PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIP+
Subjt:  PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPN

XP_022931141.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita moschata]1.1e-13188.49Show/hide
Query:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVAT
        + VK I  R + L     +RG+ +     K T    VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS     GWRSKKSGYESLVEVAT
Subjt:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVAT

Query:  MASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFP
        MASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFP
Subjt:  MASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFP

Query:  TQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
        TQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
Subjt:  TQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF

XP_022931142.1 beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita moschata]1.5e-13390.11Show/hide
Query:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRN
        + VK I  R + L     +RG+ +     K T    VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRN
Subjt:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRN

Query:  LNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFI
        LNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFI
Subjt:  LNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFI

Query:  KDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
        KDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
Subjt:  KDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF

XP_023534253.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]8.9e-11896.83Show/hide
Query:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLP
        VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS     GWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIR LLP
Subjt:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLP

Query:  QSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASI
        QSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASI
Subjt:  QSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASI

Query:  EDPALNQPCYKLCKKKEKHDT
        EDPALNQPCYKLCKKKEKH T
Subjt:  EDPALNQPCYKLCKKKEKHDT

XP_023534254.1 beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]1.2e-11999.07Show/hide
Query:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA
        VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIR LLPQSKFA
Subjt:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA

Query:  REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL
        REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL
Subjt:  REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL

Query:  NQPCYKLCKKKEKHDT
        NQPCYKLCKKKEKH T
Subjt:  NQPCYKLCKKKEKHDT

TrEMBL top hitse value%identityAlignment
A0A6J1ESQ1 beta-carotene isomerase D27, chloroplastic-like isoform X27.3e-13490.11Show/hide
Query:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRN
        + VK I  R + L     +RG+ +     K T    VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRN
Subjt:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRN

Query:  LNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFI
        LNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFI
Subjt:  LNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFI

Query:  KDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
        KDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
Subjt:  KDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF

A0A6J1ESU9 beta-carotene isomerase D27, chloroplastic-like isoform X15.2e-13288.49Show/hide
Query:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVAT
        + VK I  R + L     +RG+ +     K T    VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS     GWRSKKSGYESLVEVAT
Subjt:  LKVKRITPRHLQLA----IRGDEELDTLIKGT-IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVAT

Query:  MASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFP
        MASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFP
Subjt:  MASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFP

Query:  TQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
        TQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF
Subjt:  TQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKEKHDTDKLNQLKKRDAESKIFESHPF

A0A6J1HUP9 beta-carotene isomerase D27, chloroplastic-like isoform X33.6e-10182.95Show/hide
Query:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA
        VLT AAE G  E TR  NTVYTDNWF+K+AI H+S+AVQATSGWRSKKSGYESLVEVATMASRN NQIKQRE +I+AL RAFP PILSLIRTLLPQSKFA
Subjt:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA

Query:  REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL
        REYFAAFTTVFFAWLVGPCEVKES+  G++E+NVV IHKCRFLEQTNC GMCINLCKFP QDFIKDSLGMPVSM+PNFDDMSCEM FG+DPPA+++DPAL
Subjt:  REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL

Query:  NQPCYKLCKKKEKHDTD
         QPCYKLCK KEKH T+
Subjt:  NQPCYKLCKKKEKHDTD

A0A6J1K233 beta-carotene isomerase D27, chloroplastic-like isoform X22.4e-11697.2Show/hide
Query:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA
        VLTGAAERGGNE TRNLN VY DNWFDKLAIDHLSEAVQATSGWRS+KSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA
Subjt:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFA

Query:  REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL
        REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQ+FIKDSLGMPVSM PNFDDMSCEMKFGEDPPASIEDPAL
Subjt:  REYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPAL

Query:  NQPCYKLCKKKEKH
        NQPCYKLCKKKEKH
Subjt:  NQPCYKLCKKKEKH

A0A6J1K5Z4 beta-carotene isomerase D27, chloroplastic-like isoform X11.7e-11494.98Show/hide
Query:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLP
        VLTGAAERGGNE TRNLN VY DNWFDKLAIDHLSEAVQATS     GWRS+KSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLP
Subjt:  VLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATS-----GWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLP

Query:  QSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASI
        QSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQ+FIKDSLGMPVSM PNFDDMSCEMKFGEDPPASI
Subjt:  QSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASI

Query:  EDPALNQPCYKLCKKKEKH
        EDPALNQPCYKLCKKKEKH
Subjt:  EDPALNQPCYKLCKKKEKH

SwissProt top hitse value%identityAlignment
C7AU21 Beta-carotene isomerase D27, chloroplastic6.9e-6560.41Show/hide
Query:  TVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGP
        TVY D+WFDKLAI +LS  +Q  SG +++K GYESL++ A   SR  +  KQ E + +AL+RA P  IL++I+ ++P S+F+REYFAAFTT+FF WLVGP
Subjt:  TVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGP

Query:  CEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKL-CKKKEKH
        CEV ESE+ GR+E+NVV+I KCRFLE TNCVGMC NLCK P Q FI+DSLGM V M PNF+DMSCEM FG+ PP   +DPAL QPC++  C  K+ H
Subjt:  CEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKL-CKKKEKH

O23628 Histone H2A variant 11.6e-5394.07Show/hide
Query:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
        MAGKGGKGL+AAKT AANKDKDKDKKKPISRS+RAGIQFPVGRIHR LKTR+SA+GRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
Subjt:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL

Query:  AIRGDEELDTLIKGTIAG
        AIRGDEELDTLIKGTIAG
Subjt:  AIRGDEELDTLIKGTIAG

Q7XA78 Beta-carotene isomerase D27, chloroplastic6.9e-5748.65Show/hide
Query:  KGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSG--WRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRT
        K   +G L  A E    E +   N    D++F K+AI++LS+ +Q  +G    SK + Y+ LV+ AT  SRN +  +Q E ++ +L RA P  I SLI+ 
Subjt:  KGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSG--WRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRT

Query:  LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPP
          P SK +RE FA FTT+ FAWLVGP EV+E+E+NGR+E++VV+I KCRFLEQ+NCVGMC ++CK P+Q FIK+SLGMP+ M P+F+D+SC+M FG +PP
Subjt:  LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPP

Query:  ASIEDPALNQPCYKLCKKKEKH
           +DPA+ QPC++ CK  + +
Subjt:  ASIEDPALNQPCYKLCKKKEKH

Q8S857 Probable histone H2A variant 25.3e-4989.26Show/hide
Query:  MAGKGGKGLLAAKTPAAN--KDKDKDKKK-PISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRH
        MAGKGGKGLLAAKT AA    DKDKD+KK P+SRSSRAGIQFPVGRIHR LK R+SANGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRH
Subjt:  MAGKGGKGLLAAKTPAAN--KDKDKDKKK-PISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRH

Query:  LQLAIRGDEELDTLIKGTIAG
        LQLAIRGDEELDTLIKGTIAG
Subjt:  LQLAIRGDEELDTLIKGTIAG

R4HZ96 Beta-carotene isomerase D27, chloroplastic8.1e-8264.57Show/hide
Query:  IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQS
        + GVL    +    E  R  N VY DNWFDKLAI+HLS++VQA +G  + KSG++SLVE AT+AS+  N  +Q+  +++AL RAFP+PILS+IR ++P S
Subjt:  IAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQS

Query:  KFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIED
        K AREYFA FTT+FFAWL+GP EV+ESE+NGRRE+N+VHI KCRFLE+TNCVGMCINLCK P+Q FIKDS GMPV+M+PNFDDMSCEM FG++PPAS +D
Subjt:  KFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIED

Query:  PALNQPCYKLCKKKEKHDTDKLN
        PAL QPCYKLCK K+ H T  L+
Subjt:  PALNQPCYKLCKKKEKHDTDKLN

Arabidopsis top hitse value%identityAlignment
AT1G03055.1 unknown protein4.9e-5848.65Show/hide
Query:  KGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSG--WRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRT
        K   +G L  A E    E +   N    D++F K+AI++LS+ +Q  +G    SK + Y+ LV+ AT  SRN +  +Q E ++ +L RA P  I SLI+ 
Subjt:  KGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSG--WRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRT

Query:  LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPP
          P SK +RE FA FTT+ FAWLVGP EV+E+E+NGR+E++VV+I KCRFLEQ+NCVGMC ++CK P+Q FIK+SLGMP+ M P+F+D+SC+M FG +PP
Subjt:  LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPP

Query:  ASIEDPALNQPCYKLCKKKEKH
           +DPA+ QPC++ CK  + +
Subjt:  ASIEDPALNQPCYKLCKKKEKH

AT2G38810.1 histone H2A 84.9e-5089.83Show/hide
Query:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
        MAGKGGKGLLAAKT AA  +KD  KKK ISRSSRAGIQFPVGRIHR LK R+SA+GRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
Subjt:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL

Query:  AIRGDEELDTLIKGTIAG
        AIRGDEELDTLIKGTIAG
Subjt:  AIRGDEELDTLIKGTIAG

AT2G38810.2 histone H2A 84.9e-5089.83Show/hide
Query:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
        MAGKGGKGLLAAKT AA  +KD  KKK ISRSSRAGIQFPVGRIHR LK R+SA+GRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
Subjt:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL

Query:  AIRGDEELDTLIKGTIAG
        AIRGDEELDTLIKGTIAG
Subjt:  AIRGDEELDTLIKGTIAG

AT2G38810.3 histone H2A 84.9e-5089.83Show/hide
Query:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
        MAGKGGKGLLAAKT AA  +KD  KKK ISRSSRAGIQFPVGRIHR LK R+SA+GRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
Subjt:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL

Query:  AIRGDEELDTLIKGTIAG
        AIRGDEELDTLIKGTIAG
Subjt:  AIRGDEELDTLIKGTIAG

AT3G54560.1 histone H2A 111.1e-5494.07Show/hide
Query:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
        MAGKGGKGL+AAKT AANKDKDKDKKKPISRS+RAGIQFPVGRIHR LKTR+SA+GRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQL
Subjt:  MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQL

Query:  AIRGDEELDTLIKGTIAG
        AIRGDEELDTLIKGTIAG
Subjt:  AIRGDEELDTLIKGTIAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAAAAGGCGGCAAGGGGCTTTTAGCCGCAAAGACTCCAGCTGCTAACAAAGATAAGGACAAGGACAAGAAGAAGCCCATCTCTCGGTCCTCCCGTGCTGGTAT
ACAGTTCCCAGTGGGACGAATTCACAGGCATCTTAAAACAAGAATATCTGCAAATGGGCGAGTTGGTGCGACTGCTGCAGTGTACCTAGCATCAATTCTGGAGTATCTGA
CCGCGGAAGTGCTGGAGTTGGCTGGAAATGCGAGCAAGGATCTGAAAGTGAAGAGGATCACTCCAAGACACCTTCAGCTGGCCATTAGAGGAGACGAAGAGCTTGATACC
CTGATCAAAGGAACCATTGCTGGAGTGCTCACCGGAGCGGCAGAGAGAGGAGGAAATGAAGGAACGAGAAATCTCAATACGGTTTATACAGATAATTGGTTTGATAAGTT
GGCTATTGATCATCTATCTGAGGCAGTACAGGCAACTTCAGGTTGGAGAAGCAAAAAAAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAATTTGA
ACCAAATCAAACAAAGAGAGGCCATGATTGAGGCACTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGATAAGAACATTGCTGCCACAATCCAAATTCGCCAGAGAA
TATTTTGCCGCATTCACCACTGTCTTCTTTGCTTGGTTAGTCGGACCCTGCGAGGTGAAGGAATCAGAGTTGAATGGAAGAAGAGAGAGGAATGTTGTTCATATCCACAA
GTGCAGGTTCTTAGAGCAGACAAACTGTGTTGGAATGTGCATTAATCTATGCAAGTTTCCAACTCAGGATTTCATCAAGGATTCTTTGGGAATGCCAGTGAGCATGATCC
CCAATTTTGATGACATGAGCTGTGAGATGAAATTTGGAGAGGACCCACCAGCTTCAATCGAAGATCCAGCGCTCAACCAGCCATGTTACAAACTATGCAAAAAGAAAGAA
AAACACGACACAGACAAACTGAATCAGTTAAAGAAAAGAGACGCAGAAAGCAAGATTTTTGAATCACATCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
AAGGAAGGCATTGAAAAAGCAAAAGCGATCCAACAACCGCTCAAAATTCACTCCTCTCATTCCTTCTCTGCTTCCACCATCTCCAGGTTCAAAAATGGCGGGAAAAGGCG
GCAAGGGGCTTTTAGCCGCAAAGACTCCAGCTGCTAACAAAGATAAGGACAAGGACAAGAAGAAGCCCATCTCTCGGTCCTCCCGTGCTGGTATACAGTTCCCAGTGGGA
CGAATTCACAGGCATCTTAAAACAAGAATATCTGCAAATGGGCGAGTTGGTGCGACTGCTGCAGTGTACCTAGCATCAATTCTGGAGTATCTGACCGCGGAAGTGCTGGA
GTTGGCTGGAAATGCGAGCAAGGATCTGAAAGTGAAGAGGATCACTCCAAGACACCTTCAGCTGGCCATTAGAGGAGACGAAGAGCTTGATACCCTGATCAAAGGAACCA
TTGCTGGAGTGCTCACCGGAGCGGCAGAGAGAGGAGGAAATGAAGGAACGAGAAATCTCAATACGGTTTATACAGATAATTGGTTTGATAAGTTGGCTATTGATCATCTA
TCTGAGGCAGTACAGGCAACTTCAGGTTGGAGAAGCAAAAAAAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAATTTGAACCAAATCAAACAAAG
AGAGGCCATGATTGAGGCACTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGATAAGAACATTGCTGCCACAATCCAAATTCGCCAGAGAATATTTTGCCGCATTCA
CCACTGTCTTCTTTGCTTGGTTAGTCGGACCCTGCGAGGTGAAGGAATCAGAGTTGAATGGAAGAAGAGAGAGGAATGTTGTTCATATCCACAAGTGCAGGTTCTTAGAG
CAGACAAACTGTGTTGGAATGTGCATTAATCTATGCAAGTTTCCAACTCAGGATTTCATCAAGGATTCTTTGGGAATGCCAGTGAGCATGATCCCCAATTTTGATGACAT
GAGCTGTGAGATGAAATTTGGAGAGGACCCACCAGCTTCAATCGAAGATCCAGCGCTCAACCAGCCATGTTACAAACTATGCAAAAAGAAAGAAAAACACGACACAGACA
AACTGAATCAGTTAAAGAAAAGAGACGCAGAAAGCAAGATTTTTGAATCACATCCATTTTAGCTCCTAATTGTTTTTGTTTTCAATGTTTTCACGAGCGCAGGAGAAGCT
CCGTTCTTCTTCTTTTTCCTAGATTTACACAACTTCGCAGGAATCTGGGTTTCCTAGTGTGTCCAAACACGAATATGATTAGGCTAATTTGAACCACAAATTACAAGGAC
AATATTGATGATAACTTCTAATTCTCCTA
Protein sequenceShow/hide protein sequence
MAGKGGKGLLAAKTPAANKDKDKDKKKPISRSSRAGIQFPVGRIHRHLKTRISANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDT
LIKGTIAGVLTGAAERGGNEGTRNLNTVYTDNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAFPRPILSLIRTLLPQSKFARE
YFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQPCYKLCKKKE
KHDTDKLNQLKKRDAESKIFESHPF