; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G018330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionVAN3-binding protein-like
Genome locationCmo_Chr02:10388287..10389221
RNA-Seq ExpressionCmoCh02G018330
SyntenyCmoCh02G018330
Gene Ontology termsGO:0006892 - post-Golgi vesicle-mediated transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0010087 - phloem or xylem histogenesis (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0005802 - trans-Golgi network (cellular component)
InterPro domainsIPR008546 - Domain of unknown function DUF828
IPR040269 - VAN3-binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036351.1 VAN3-binding protein [Cucurbita argyrosperma subsp. argyrosperma]8.4e-79100Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

XP_022931025.1 VAN3-binding protein-like [Cucurbita moschata]8.4e-79100Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

XP_022995625.1 VAN3-binding protein-like [Cucurbita maxima]3.6e-7496.75Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPS    MPMHLPSKSASGSSCTTSSIPEDVSGE EEFPIHHGNGNHFSFSSTATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

XP_023532686.1 VAN3-binding protein [Cucurbita pepo subsp. pepo]8.4e-79100Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

XP_038888345.1 VAN3-binding protein-like [Benincasa hispida]1.3e-6892.21Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLK CRTHLPESPRAPMEFLSRSWSASALEVSKALA PPPSMPMP+P  LP KSASGSSCTTSSIPEDV+GE EEFP+ HGNGNHFSFSS+ATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPS+EFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

TrEMBL top hitse value%identityAlignment
A0A5A7UV69 VAN3-binding protein-like1.3e-6487.66Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYS KP RTHLPESPRAPMEFLSRSWSASALEVSKALA P PSMP      LP KSAS SSCTTSSIPEDV+GE EEFP+ H NGNHFSFSS+ATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPS+EFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

A0A6J1EYD6 VAN3-binding protein-like4.1e-79100Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

A0A6J1HGD7 VAN3-binding protein-like5.1e-6687.01Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLK CRTHLPESPRAPMEFLSRSWSASA EVSKAL PPP      MP HLP KSASGSSCTTSSIPEDV+GE E+FP+  GNGN+FSFSS+ATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPS+EFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

A0A6J1HUV8 VAN3-binding protein-like8.8e-6687.01Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLK CRTHLPESPRAPMEFLSRSWSASA EVSKAL PPP      MP HLP KSASGSSCTTSSIPEDV+GE EEFP+  G+GN+FSFSS+ATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPS+EFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

A0A6J1K4G8 VAN3-binding protein-like1.8e-7496.75Show/hide
Query:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ
        MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPS    MPMHLPSKSASGSSCTTSSIPEDVSGE EEFPIHHGNGNHFSFSSTATSQ
Subjt:  MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQ

Query:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
        LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK
Subjt:  LVLDRIMSQSVREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVK

SwissProt top hitse value%identityAlignment
Q8W4K5 VAN3-binding protein1.6e-3259.6Show/hide
Query:  THLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSI-----PEDVSGELEEFPIHHGN--GNHFSFSSTATSQLVLD
        T LPESPR PMEFLSRSWS SALEVS+AL                +KSAS ++   SSI      E ++ E EE P  +     + FSF+++ATSQLVL+
Subjt:  THLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSI-----PEDVSGELEEFPIHHGN--GNHFSFSSTATSQLVLD

Query:  RIMSQSVREEVSPLTSGRLSHSSGPLN-GGSLTETDSPPVSPSEEFDDVVK
        RIMSQS   EVSPLTSGRLSHSSGPLN GGS TETDSPP+SPS+EFDDV+K
Subjt:  RIMSQSVREEVSPLTSGRLSHSSGPLN-GGSLTETDSPPVSPSEEFDDVVK

Arabidopsis top hitse value%identityAlignment
AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region4.1e-2352.52Show/hide
Query:  PESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDV-SGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVRE
        PE+P  PMEFLSRSWS SA EVSKAL P            L SK++  +  TT  + E + +GE E       +GN FSF+ + TSQ+V+DRI+SQS  +
Subjt:  PESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDV-SGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVRE

Query:  EVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDV
        EVSP TSGRLSHSSGPLNG   + TDSPP+SP  + DD+
Subjt:  EVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDV

AT3G63300.1 FORKED 11.1e-3359.6Show/hide
Query:  THLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSI-----PEDVSGELEEFPIHHGN--GNHFSFSSTATSQLVLD
        T LPESPR PMEFLSRSWS SALEVS+AL                +KSAS ++   SSI      E ++ E EE P  +     + FSF+++ATSQLVL+
Subjt:  THLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSI-----PEDVSGELEEFPIHHGN--GNHFSFSSTATSQLVLD

Query:  RIMSQSVREEVSPLTSGRLSHSSGPLN-GGSLTETDSPPVSPSEEFDDVVK
        RIMSQS   EVSPLTSGRLSHSSGPLN GGS TETDSPP+SPS+EFDDV+K
Subjt:  RIMSQSVREEVSPLTSGRLSHSSGPLN-GGSLTETDSPPVSPSEEFDDVVK

AT4G14740.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region2.8e-2453.68Show/hide
Query:  PESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVREE
        PE+P  PMEFL+RSWS SALEVSKAL PP P +       L SK+         S   D  G+ E+  +    GN FSF+ + TSQ+V+DRI+S S  +E
Subjt:  PESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVREE

Query:  VSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFD
        VSP TSGRLSHSSGPLNG   + TDSPPVSP E  D
Subjt:  VSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFD

AT4G14740.2 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region2.8e-2453.68Show/hide
Query:  PESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVREE
        PE+P  PMEFL+RSWS SALEVSKAL PP P +       L SK+         S   D  G+ E+  +    GN FSF+ + TSQ+V+DRI+S S  +E
Subjt:  PESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVREE

Query:  VSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFD
        VSP TSGRLSHSSGPLNG   + TDSPPVSP E  D
Subjt:  VSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFD

AT5G43870.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region1.3e-1649.25Show/hide
Query:  PESPRAPMEFLSRSWSASALEVSKA-LAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVRE
        PE+P   MEFLSR+WSASA EVS+A +A PP S P  M     S+  +GSS  T  +PED    +         GN FSF+S+ TS +V++RIM+QS  E
Subjt:  PESPRAPMEFLSRSWSASALEVSKA-LAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQSVRE

Query:  EVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSE
          SP TSGRLSHSS          TDSPP+SPS+
Subjt:  EVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATTCTTACTCCCTGAAACCCTGTAGAACTCACTTACCAGAAAGCCCAAGAGCGCCGATGGAGTTCCTCTCTCGCTCATGGAGTGCCTCAGCCCTCGAAGTCTC
CAAGGCTCTGGCACCCCCTCCTCCTTCAATGCCTATGCCCATGCCTATGCATTTACCTTCAAAATCCGCCAGTGGGTCTTCCTGTACTACGTCGTCTATTCCCGAAGACG
TCTCCGGCGAGTTGGAGGAGTTCCCTATTCATCATGGGAACGGAAACCACTTCTCTTTTTCTTCTACCGCCACGTCTCAGCTGGTGCTTGATCGCATAATGTCACAATCC
GTCAGAGAGGAGGTGTCGCCGTTGACGTCCGGGAGGCTTTCACACAGCAGTGGGCCTTTGAACGGCGGGTCTTTGACGGAAACAGACAGCCCGCCGGTGTCGCCTTCGGA
GGAATTCGACGACGTCGTTAAGCCTTCTGTTTCACAGTCTGTCTGCAGTGTGTTCTAA
mRNA sequenceShow/hide mRNA sequence
TGTTTCTTTTTTGGGCGTTAAATTGCCTCTGCTATATCTTTTCCTTTGAGGCACATGCAAAATTTGACTAAGGTGTGGTCCACATGCGTTCACTGTTTCACCATACACAC
ACCGATTAAAGGTCTGTGAATAAAAGGGTTGAGGGGAAGGCAAAGCATAAAACCCAAACCCAAACCCAACACCGCTCTCTCTTCATCAAACTCTCTGTTCCTCATTCAAC
GCCCAAAAAACACAAACAAAACCCCTCTTCAGCTTCACCATTGCAACCACTACTAGTTTAATGGACGATTCTTACTCCCTGAAACCCTGTAGAACTCACTTACCAGAAAG
CCCAAGAGCGCCGATGGAGTTCCTCTCTCGCTCATGGAGTGCCTCAGCCCTCGAAGTCTCCAAGGCTCTGGCACCCCCTCCTCCTTCAATGCCTATGCCCATGCCTATGC
ATTTACCTTCAAAATCCGCCAGTGGGTCTTCCTGTACTACGTCGTCTATTCCCGAAGACGTCTCCGGCGAGTTGGAGGAGTTCCCTATTCATCATGGGAACGGAAACCAC
TTCTCTTTTTCTTCTACCGCCACGTCTCAGCTGGTGCTTGATCGCATAATGTCACAATCCGTCAGAGAGGAGGTGTCGCCGTTGACGTCCGGGAGGCTTTCACACAGCAG
TGGGCCTTTGAACGGCGGGTCTTTGACGGAAACAGACAGCCCGCCGGTGTCGCCTTCGGAGGAATTCGACGACGTCGTTAAGCCTTCTGTTTCACAGTCTGTCTGCAGTG
TGTTCTAA
Protein sequenceShow/hide protein sequence
MDDSYSLKPCRTHLPESPRAPMEFLSRSWSASALEVSKALAPPPPSMPMPMPMHLPSKSASGSSCTTSSIPEDVSGELEEFPIHHGNGNHFSFSSTATSQLVLDRIMSQS
VREEVSPLTSGRLSHSSGPLNGGSLTETDSPPVSPSEEFDDVVKPSVSQSVCSVF