; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G018410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNascent polypeptide-associated complex subunit alpha, muscle-specific form
Genome locationCmo_Chr02:10430950..10431549
RNA-Seq ExpressionCmoCh02G018410
SyntenyCmoCh02G018410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571464.1 hypothetical protein SDJN03_28192, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7675.73Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAV+VVE QHRNQYYG       A F S PSRDFRG+NCRSFQSGAGILPTP KA  S TKH YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N N  LHEEFYD +FSFSELWAGPTYSNSPPPSSL IPKFSVAKRT S E+PRSAPEF++H PSAKSAPPSPTR+   S RF FH+ DSATKTLRRIL+
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

KAG6606421.1 hypothetical protein SDJN03_03738, partial [Cucurbita argyrosperma subsp. sororia]1.8e-10798.49Show/hide
Query:  MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNIVL
        MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSET+HFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNN VL
Subjt:  MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNIVL

Query:  HEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE
        HEEFYDPSFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE
Subjt:  HEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE

KAG7011227.1 hypothetical protein SDJN02_26130, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6474.73Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAV+VVE QHRNQYYG       A F S PSRDFRG+NCRSFQSGAGILPTP KA  S TKH YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPR
         N N  LHEEFYD +FSFSELWAGPTYSNSPPPSSL IPKFSVAKRT S E+PRSAPEF++H PSAKSAPPSPTR+   S R
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPR

KGN47907.1 hypothetical protein Csa_004001 [Cucumis sativus]4.2e-7776.7Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDFRG+NCRSFQSGAGILPTP KA  SET+HFYP SPKTP  CL+SNS N K  AT+ +APIPIKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N +   HEEFYD SFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQNFS RFFFH+ DSATKTLRRIL+
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDV NE
Subjt:  LDVDNE

XP_016900729.1 PREDICTED: uncharacterized protein LOC107990294 [Cucumis melo]3.0e-7575.73Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N + V HEEFYD SFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQ+FS R+FFH+ DSATKTLRRIL+
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP6 Uncharacterized protein2.1e-7776.7Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDFRG+NCRSFQSGAGILPTP KA  SET+HFYP SPKTP  CL+SNS N K  AT+ +APIPIKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N +   HEEFYD SFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQNFS RFFFH+ DSATKTLRRIL+
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDV NE
Subjt:  LDVDNE

A0A1S4DXL6 uncharacterized protein LOC1079902941.5e-7575.73Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N + V HEEFYD SFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQ+FS R+FFH+ DSATKTLRRIL+
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

A0A5A7UUU2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form5.8e-5673.65Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK
         N + V HEEFYD SFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTS E+ RSAPEF++HHPSAK
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK

A0A5D3CPQ8 Nascent polypeptide-associated complex subunit alpha, muscle-specific form5.8e-5673.65Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK
         N + V HEEFYD SFSFSELWAGPTYSNSPPPSSL IPKFSVAKRTTS E+ RSAPEF++HHPSAK
Subjt:  LNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK

A0A5N6QRS4 Uncharacterized protein2.3e-4457.89Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKA-STSETKH-FY-PSS--PKTPLTCLSSNSGNAKSGATVPTAPIP
        ME +VV   QHRNQYY          FGS PSRDF G+NCRS+QSGAGILPTP KA STS T+  FY PSS  P TP    S +  ++K+  TV +API 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKA-STSETKH-FY-PSS--PKTPLTCLSSNSGNAKSGATVPTAPIP

Query:  IKPKFLNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSV-AKRTTSQEIPRSAPE-FDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATK
        I  K         E+  +   SFSELWAGPTYSNSPPPSSL IPKFS+  KRT S ++PRS PE    HHP AKSAPPSPTR+   S R  F   DSATK
Subjt:  IKPKFLNNNIVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLSIPKFSV-AKRTTSQEIPRSAPE-FDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATK

Query:  TLRRILHLD
        TLRRIL+LD
Subjt:  TLRRILHLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein5.6e-2744.23Show/hide
Query:  VVVEQQHRNQYYGAP------FGSFPSRDFRGVNCRSFQSGAGILPTPSK-ASTSETKHFY-----PSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPK
        ++V  +HR+QYYG        F S PS+ FR +NCR+FQSG G+LP P + +ST  TK        P SPK+ L      S    SG    T+PIPI   
Subjt:  VVVEQQHRNQYYGAP------FGSFPSRDFRGVNCRSFQSGAGILPTPSK-ASTSETKHFY-----PSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPK

Query:  FLNNNIVLHEEFYDP--SFSFSELWAGPTYSNSPPPSSLSIPKFSV-AKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLR
          +       EF D   S S+SELWAGPTYSNSPPP+S+ IPKFS+  KRT S   P      D+    AKSAP SPT   + +P   F +  SAT TLR
Subjt:  FLNNNIVLHEEFYDP--SFSFSELWAGPTYSNSPPPSSLSIPKFSV-AKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLR

Query:  RILHLDVD
        R+L+L+++
Subjt:  RILHLDVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGTGGTCGTTGTTGAGCAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAACTGTAGGAGTTTCCA
ATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTAAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCG
GAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACATTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCG
TTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTATCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCG
TTCTGCCCCTGAATTTGATTTGCATCACCCATCTGCCAAGTCTGCACCACCATCCCCAACTCGAGACCAAAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTG
CGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGTGGTCGTTGTTGAGCAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAACTGTAGGAGTTTCCA
ATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTAAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCG
GAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACATTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCG
TTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTATCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCG
TTCTGCCCCTGAATTTGATTTGCATCACCCATCTGCCAAGTCTGCACCACCATCCCCAACTCGAGACCAAAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTG
CGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGA
Protein sequenceShow/hide protein sequence
MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNIVLHEEFYDPSFS
FSELWAGPTYSNSPPPSSLSIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE