| GenBank top hits | e value | %identity | Alignment |
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| XP_004150106.1 small nuclear ribonucleoprotein SmD1b [Cucumis sativus] | 9.3e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_009789901.1 PREDICTED: small nuclear ribonucleoprotein Sm D1 [Nicotiana sylvestris] | 1.2e-52 | 98.25 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_012473940.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium raimondii] | 1.2e-52 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLK VKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022931093.1 small nuclear ribonucleoprotein SmD1b [Cucurbita moschata] | 4.2e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022963993.1 small nuclear ribonucleoprotein SmD1b-like [Cucurbita moschata] | 7.1e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LD16 Small nuclear ribonucleoprotein Sm D1 | 4.5e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1DVC4 Small nuclear ribonucleoprotein Sm D1 | 4.5e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+PLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1EXE6 Small nuclear ribonucleoprotein Sm D1 | 2.0e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1HJI3 Small nuclear ribonucleoprotein Sm D1 | 3.5e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1K070 Small nuclear ribonucleoprotein Sm D1 | 2.0e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62314 Small nuclear ribonucleoprotein Sm D1 | 8.0e-39 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q3ZC10 Small nuclear ribonucleoprotein Sm D1 | 8.0e-39 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q4R5F6 Small nuclear ribonucleoprotein Sm D1 | 8.0e-39 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SSF1 Small nuclear ribonucleoprotein SmD1a | 8.2e-52 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SY09 Small nuclear ribonucleoprotein SmD1b | 1.3e-52 | 93.86 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PLG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAGK P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PLG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 6.3e-07 | 30.09 | Show/hide |
Query: VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRG
V+ L + + V++ELK+G + G++ + + N L+ + T K ++H+ +RG+ +R+ ++PD L + R+K K + G +GRGRG
Subjt: VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRG
Query: RGRGR---GRGRG
RG+ G GRG
Subjt: RGRGR---GRGRG
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 5.8e-53 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 5.8e-53 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 9.0e-54 | 93.86 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PLG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAGK P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PLG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 2.4e-51 | 86.29 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK
MKLVRFLMKLNNETVSIELKNGT+VHGTIT GVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPK
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK
Query: KPTAGK-PLGRGRGRGRGRGRGRG
KPTAGK P GRGRGRGRGRGRGRG
Subjt: KPTAGK-PLGRGRGRGRGRGRGRG
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