; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G018600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G018600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationCmo_Chr02:10492044..10495991
RNA-Seq ExpressionCmoCh02G018600
SyntenyCmoCh02G018600
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-17799.38Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGK
        HEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGK

KAG7036378.1 Exosome complex component RRP4-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-17495.56Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA-------------RY
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA             RY
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRA-------------RY

Query:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSNGK
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSNGK

XP_022931250.1 exosome complex component RRP4 homolog [Cucurbita moschata]4.5e-17899.39Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGKG
        HEMLGSEFCVLTAEKEAERRTS+ KG
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGKG

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]1.9e-17699.08Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGK
        HEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGK

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]1.4e-17698.77Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEG+FGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSL ISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGK
        HEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGK

TrEMBL top hitse value%identityAlignment
A0A6J1DNK7 exosome complex component RRP4 homolog isoform X23.5e-16088.04Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQ+SLNQTQKIRLQ ALE+LESIS KANSDASV+VADTIP+NYEDG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVGDI+VGRV 
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGN-QVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNID
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +NK EQKG K EG+FGN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV+LS+SLNID
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGN-QVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNID

Query:  VHEMLGSEFCVLTAEKEAERRTSNGK
        VHEMLGSEFCVL AE E ERRTS+ K
Subjt:  VHEMLGSEFCVLTAEKEAERRTSNGK

A0A6J1EXY1 exosome complex component RRP4 homolog2.2e-17899.39Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGKG
        HEMLGSEFCVLTAEKEAERRTS+ KG
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGKG

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X13.7e-17094.15Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLI GCNGFIWIGEHVDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS SLNI+V
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGK
        HEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGK

A0A6J1HVC7 exosome complex component RRP4 homolog isoform X19.4e-16692Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+SLNQTQ+IRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVER+NKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRR+TA DELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGK+ERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLI GCNGFI IGE VDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS+SLNI+V
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGK
        HEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGK

A0A6J1K7S0 exosome complex component RRP4 homolog9.1e-17799.08Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
        QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDV

Query:  HEMLGSEFCVLTAEKEAERRTSNGK
        HEMLGSEFCVLTAEKEAERRTS+ K
Subjt:  HEMLGSEFCVLTAEKEAERRTSNGK

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp41.2e-4542.8Show/hide
Query:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEEND
        ++GHGT   +G + A++ G V+RVNKLI V+ LR++Y PE+GD+I+G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MR+ F+E D
Subjt:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEEND

Query:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQ
        ++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ +H    E+      I + E++ S  E  + N+
Subjt:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQ

Query:  VQE-RIYTPLE-TRQNICRTANAIRVL-----SILGFIMSVEVIMETVSLSISLNID
          E   YT L  +R +IC    A R L     SI  F  S  V      L++  N+D
Subjt:  VQE-RIYTPLE-TRQNICRTANAIRVL-----SILGFIMSVEVIMETVSLSISLNID

Q13868 Exosome complex component RRP43.0e-4450.73Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN
        ++RL  A + L     +      VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW+++ N
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q2KID0 Exosome complex component RRP44.6e-4549.07Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN
        ++RL  A + L     + +    VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW+++ N
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEHVDPTED
        GFIW+    +  ED
Subjt:  GFIWIGEHVDPTED

Q8VBV3 Exosome complex component RRP41.6e-4550.23Show/hide
Query:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN
        ++RL +A + L     + +    VV  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW+++ N
Subjt:  KIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI---GEHVD
        GFIWI    EH D
Subjt:  GFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog3.7e-11966.56Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASV+V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDI+VGRV 
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNID
        E  GIDLI+GCNGFIW+GEHV+      V DP+   +QK  +   S  +  +E+ + PLETRQ ICR  NAIRVLS LGF +++EVIMETV+LS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNID

Query:  VHEMLGSEFCVLTAEKEAERRTSNGK
        +H+MLGSEF V+ AE EAERR +  K
Subjt:  VHEMLGSEFCVLTAEKEAERRTSNGK

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 42.6e-12066.56Show/hide
Query:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASV+V D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDI+VGRV 
Subjt:  MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNID
        E  GIDLI+GCNGFIW+GEHV+      V DP+   +QK  +   S  +  +E+ + PLETRQ ICR  NAIRVLS LGF +++EVIMETV+LS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNID

Query:  VHEMLGSEFCVLTAEKEAERRTSNGK
        +H+MLGSEF V+ AE EAERR +  K
Subjt:  VHEMLGSEFCVLTAEKEAERRTSNGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGATTACAAGTTTCCTTGAATCAAACCCAGAAGATTCGGCTTCAAAGAGCCCTAGAAACGCTCGAGTCTATCTCTTCGAAAGCCAATTCCGATGCTTCAGTTGT
AGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACCCTTGACTTGAATGGAGAAGTAGTTGCCACTATTTGTGGAGTGGTTGAGCGAG
TCAATAAGCTTATCTATGTACGTGCCTTACGTGCCAGATATAAACCAGAGGTTGGTGATATCATAGTGGGGCGTGTTACGGAGGTTGCTCCCAAACGTTGGAGATTGGAT
ATAAATTATAGCCAAGATGCTGTTTTGATGCTTTCTTCTATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTGGATGAACTCAACATGCGGACCATTTTTGA
AGAAAATGATGTTATTTGCGCAGAAGTTCGTGGTTTCCAGCATGATGGCCTACACCTTCAAGCAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGCTGCTCACAG
TTTCACCGTATCTAGTAAAGAGACGCAAACAGCACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTTGGATGCAATGGATTTATCTGGATTGGGGAGCATGTT
GATCCTACAGAGGATATGATGGTAGAAGATCCAATTAATAAATCTGAACAGAAGGGTTCAAAATTTGAAGGAAGTTTTGGTAACCAAGTGCAAGAAAGAATATATACTCC
ATTGGAGACACGTCAGAATATATGCAGAACTGCAAACGCCATTCGAGTATTGTCTATCTTAGGTTTCATAATGTCAGTAGAAGTCATAATGGAGACAGTAAGTCTAAGTA
TTTCTCTGAACATCGATGTGCATGAAATGCTTGGGTCGGAGTTCTGTGTTCTCACTGCAGAAAAAGAGGCTGAGCGGCGGACTTCGAATGGAAAAGGAAATGCGGAGTTT
AGTCCGGAAGCACTGAGCAAAGCAAGATGCGGAAGTAGTGCTAATGACAGAAATTTTCAAAAGACTATCCATTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAACTCATTTATTTTCTTCTCCCTCTCTTTTTTTTCCTATGAACCCTAGATTTACGCTGTCGCTCTGCTAAGAAGCCGCCGTCCACGTCCATCGTCGCCGTCGCACC
ACTTTGTCAAGACCCACCGTGTTTCAACCCCCTCCCCGTTCTCTTCGACGGAATCCTAGATCTCCACTGCCGCCTTCCTTACGTTCAACTTCGCTGATTCCCCACGTTCT
CCATTTCTTTCCCTCTCTCCTCTGCAACCATTGACGCTGTTTGCCGTCCGCATTTTGTATTTTTTCGTTTGCAGATCGCCTCGTTCCAGGGTCACTGCCGTCGTTGCATA
GACGGCACCTGGTTGGCCTGTTGTACCTTTCGCCGTCGCACCTGTCGTGACTCGAAGAAATGATTTTGTTGCGACGTTGCTAGTCCTTATTTGTATATGAGAGGATTACA
AGTTTCCTTGAATCAAACCCAGAAGATTCGGCTTCAAAGAGCCCTAGAAACGCTCGAGTCTATCTCTTCGAAAGCCAATTCCGATGCTTCAGTTGTAGTTGCTGATACTA
TTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGAACCCTTGACTTGAATGGAGAAGTAGTTGCCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATC
TATGTACGTGCCTTACGTGCCAGATATAAACCAGAGGTTGGTGATATCATAGTGGGGCGTGTTACGGAGGTTGCTCCCAAACGTTGGAGATTGGATATAAATTATAGCCA
AGATGCTGTTTTGATGCTTTCTTCTATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTGGATGAACTCAACATGCGGACCATTTTTGAAGAAAATGATGTTA
TTTGCGCAGAAGTTCGTGGTTTCCAGCATGATGGCCTACACCTTCAAGCAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGCTGCTCACAGTTTCACCGTATCTA
GTAAAGAGACGCAAACAGCACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTTGGATGCAATGGATTTATCTGGATTGGGGAGCATGTTGATCCTACAGAGGA
TATGATGGTAGAAGATCCAATTAATAAATCTGAACAGAAGGGTTCAAAATTTGAAGGAAGTTTTGGTAACCAAGTGCAAGAAAGAATATATACTCCATTGGAGACACGTC
AGAATATATGCAGAACTGCAAACGCCATTCGAGTATTGTCTATCTTAGGTTTCATAATGTCAGTAGAAGTCATAATGGAGACAGTAAGTCTAAGTATTTCTCTGAACATC
GATGTGCATGAAATGCTTGGGTCGGAGTTCTGTGTTCTCACTGCAGAAAAAGAGGCTGAGCGGCGGACTTCGAATGGAAAAGGAAATGCGGAGTTTAGTCCGGAAGCACT
GAGCAAAGCAAGATGCGGAAGTAGTGCTAATGACAGAAATTTTCAAAAGACTATCCATTAA
Protein sequenceShow/hide protein sequence
MRGLQVSLNQTQKIRLQRALETLESISSKANSDASVVVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLD
INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRTIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHV
DPTEDMMVEDPINKSEQKGSKFEGSFGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDVHEMLGSEFCVLTAEKEAERRTSNGKGNAEF
SPEALSKARCGSSANDRNFQKTIH