; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G000180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G000180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA-directed DNA polymerase
Genome locationCmo_Chr03:206245..224356
RNA-Seq ExpressionCmoCh03G000180
SyntenyCmoCh03G000180
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR002298 - DNA polymerase A
IPR002421 - 5'-3' exonuclease
IPR008918 - Helix-hairpin-helix motif, class 2
IPR020045 - DNA polymerase I-like, H3TH domain
IPR020046 - 5'-3' exonuclease, alpha-helical arch, N-terminal
IPR029060 - PIN-like domain superfamily
IPR036279 - 5'-3' exonuclease, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022933106.1 uncharacterized protein LOC111439872 isoform X1 [Cucurbita moschata]1.0e-12377.64Show/hide
Query:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV
        VVFDHD                  GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRV
Subjt:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV

Query:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG
        VSPDKDFFQIISPSLRLLRIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVG
Subjt:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG

Query:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
        DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
Subjt:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY

Query:  AEGFSADPIMRRVLNLWKKLEK
        AEGFSADPIMRRVLNLWKKLEK
Subjt:  AEGFSADPIMRRVLNLWKKLEK

XP_022933108.1 uncharacterized protein LOC111439872 isoform X2 [Cucurbita moschata]4.4e-12782.24Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
        RIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
        QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK

Query:  KLEK
        KLEK
Subjt:  KLEK

XP_022967800.1 uncharacterized protein LOC111467206 [Cucurbita maxima]1.0e-12377.64Show/hide
Query:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV
        VVFDHD                  GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRV
Subjt:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV

Query:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG
        VSPDKDFFQIISPSLRLLRIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVG
Subjt:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG

Query:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
        DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
Subjt:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY

Query:  AEGFSADPIMRRVLNLWKKLEK
        AEGFSADPIMRRVLNLWKKLEK
Subjt:  AEGFSADPIMRRVLNLWKKLEK

XP_023543411.1 uncharacterized protein LOC111803303 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-12377.64Show/hide
Query:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV
        VVFDHD                  GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRV
Subjt:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV

Query:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG
        VSPDKDFFQIISPSLRLLRIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVG
Subjt:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG

Query:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
        DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
Subjt:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY

Query:  AEGFSADPIMRRVLNLWKKLEK
        AEGFSADPIMRRVLNLWKKLEK
Subjt:  AEGFSADPIMRRVLNLWKKLEK

XP_023543412.1 uncharacterized protein LOC111803303 isoform X2 [Cucurbita pepo subsp. pepo]4.4e-12782.24Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
        RIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
        QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK

Query:  KLEK
        KLEK
Subjt:  KLEK

TrEMBL top hitse value%identityAlignment
A0A6J1D5H7 DNA-directed DNA polymerase6.9e-11874.22Show/hide
Query:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV
        VVFDHD                  GSTFRH  YPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVA GCKVRV
Subjt:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV

Query:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG
        VSPDKDFFQI+SPSLRLLRIAPRG+                                              MVSFGLEDFAEKYG LEPSQFVDV+SLVG
Subjt:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG

Query:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
        DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNA QAILSK+LAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSL+TAIGAY
Subjt:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY

Query:  AEGFSADPIMRRVLNLWKKLEK
        AEGFSADPI+RRVL LWKKLEK
Subjt:  AEGFSADPIMRRVLNLWKKLEK

A0A6J1D7Q6 DNA-directed DNA polymerase3.0e-12178.62Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFDHDGSTFRH  YPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVA GCKVRVVSPDKDFFQI+SPSLRLL
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
        RIAPRG+                                              MVSFGLEDFAEKYG LEPSQFVDV+SLVGDKSDNIPGVDGIGNVNAV
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
        QLITRFGTLENLLQHVDQVEDERIRKMLVTNA QAILSK+LAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSL+TAIGAYAEGFSADPI+RRVL LWK
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK

Query:  KLEK
        KLEK
Subjt:  KLEK

A0A6J1EY78 DNA-directed DNA polymerase4.9e-12477.64Show/hide
Query:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV
        VVFDHD                  GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRV
Subjt:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV

Query:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG
        VSPDKDFFQIISPSLRLLRIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVG
Subjt:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG

Query:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
        DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
Subjt:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY

Query:  AEGFSADPIMRRVLNLWKKLEK
        AEGFSADPIMRRVLNLWKKLEK
Subjt:  AEGFSADPIMRRVLNLWKKLEK

A0A6J1F3S3 DNA-directed DNA polymerase2.1e-12782.24Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
        RIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
        QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWK

Query:  KLEK
        KLEK
Subjt:  KLEK

A0A6J1HVF9 DNA-directed DNA polymerase4.9e-12477.64Show/hide
Query:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV
        VVFDHD                  GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIE       VPGVEADDVIGTLALRSVAAGCKVRV
Subjt:  VVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRV

Query:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG
        VSPDKDFFQIISPSLRLLRIAPRG+                                              MVSFGLEDFAEKYGVLEPSQFVDVMSLVG
Subjt:  VSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVG

Query:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
        DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY
Subjt:  DKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAY

Query:  AEGFSADPIMRRVLNLWKKLEK
        AEGFSADPIMRRVLNLWKKLEK
Subjt:  AEGFSADPIMRRVLNLWKKLEK

SwissProt top hitse value%identityAlignment
O52225 DNA polymerase I, thermostable1.4e-3034Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFD    +FRH  Y AYK+ R PTP+   + L  +K  +  + +  +E        PG EADDV+GTLA ++   G +VR+++ D+DFFQ++S  + +L
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
                                                        LP   +V+   +D  EKYGV  P ++VD  +L GD+SDNIPGV GIG   A+
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPL
        +L+  +G++ENLL+++D+V+ + +R+ +  + E   LS DLA +R+DLPL
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPL

P30313 DNA polymerase I, thermostable3.7e-2834.4Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFD    +FRH  Y AYK+ R PTP+   + L  +K  +  + +  +E       VPG EADDV+ TLA R+   G +VR+++ D+D +Q++S  + +L
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
           P G++                           + P+                        EKYG L P Q+VD  +L GD SDNIPGV GIG   A 
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPL
        +LI  +G+LENL QH+DQV+   +R+ L    E   LS+ L+ + +DLPL
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPL

P52026 DNA polymerase I4.4e-2931.79Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        V FD   +TFRH  +  YK  R  TP  + +    L+  +K+  +   E+          EADD+IGT+A R+   G  V+V+S D+D  Q+ SP +  +
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
         I  +G                                            I+ + S+  E   EKYG L P Q VD+  L+GDKSDNIPGV GIG   AV
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIG
        +L+ +FGT+EN+L  +D+++ E++++ L    + A+LSK LA +  D P   V  T  D+++K   ++ EK  +L   +G
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIG

P52028 DNA polymerase I, thermostable2.6e-2934Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        VVFD    +FRH  Y AYK+ R PTP+   + L  +K  +  +    +E       VPG EADDV+ TLA ++   G +VR+++ D+D +Q++S  + +L
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
           P G                                     HL+             E   EKYG L P Q+VD  +LVGD SDN+PGV GIG   A+
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPL
        +L+  +G+LENLL+++D+V+ E +R+ +  + E   LS +L+ +R+DLPL
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPL

Q04957 DNA polymerase I1.2e-2929.65Show/hide
Query:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL
        V FD   +TFRH  +  YK  R  TP  + +    L+  +++  +   E+          EADD+IGTLA R+   G +V+V+S D+D  Q+ SP +  +
Subjt:  VVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISPSLRLL

Query:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV
         I  +G                                            I+ +  +  E   EKYG L P Q VD+  L+GDKSDNIPGV GIG   AV
Subjt:  RIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAV

Query:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIG--AYAEGFSA------DPIM
        +L+ +FGT+EN+L  +D+++ E++++ L  + E A+LSK LA +R D P   V  +  D+ ++   ++ EK  +L   +G  ++ E   +       P+ 
Subjt:  QLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIG--AYAEGFSA------DPIM

Query:  RRVLNLWKKLEKKMLAE
        +    L  ++ ++MLA+
Subjt:  RRVLNLWKKLEKKMLAE

Arabidopsis top hitse value%identityAlignment
AT3G52050.1 5'-3' exonuclease family protein6.4e-10058.97Show/hide
Query:  KLTKNQQQVVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSV
        K   +   VVFDHD                  G  FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIE       VPGVEADDVIGTLA+RS+
Subjt:  KLTKNQQQVVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSV

Query:  AAGCKVRVVSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQF
        +AG KVRVVSPDKDFFQI+SPSLRLLR+ PRG                                             S M SFG+EDFA+K+G LEP+QF
Subjt:  AAGCKVRVVSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQF

Query:  VDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTS
        VD+++L GDKSDNIPGVDGIGNV+AV+LI+RFGTLENLLQ VD++++ +I++ L+ +A+QAILSK LA+LRSDLP Y+VPF T+DL FKKPEDNGEK +S
Subjt:  VDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTS

Query:  LLTAIGAYAEGFSADPIMRRVLNLWKKLE
        LL AI  YAEGFSADP++RR   LW+KLE
Subjt:  LLTAIGAYAEGFSADPIMRRVLNLWKKLE

AT3G52050.2 5'-3' exonuclease family protein6.4e-10058.97Show/hide
Query:  KLTKNQQQVVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSV
        K   +   VVFDHD                  G  FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIE       VPGVEADDVIGTLA+RS+
Subjt:  KLTKNQQQVVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSV

Query:  AAGCKVRVVSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQF
        +AG KVRVVSPDKDFFQI+SPSLRLLR+ PRG                                             S M SFG+EDFA+K+G LEP+QF
Subjt:  AAGCKVRVVSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQF

Query:  VDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTS
        VD+++L GDKSDNIPGVDGIGNV+AV+LI+RFGTLENLLQ VD++++ +I++ L+ +A+QAILSK LA+LRSDLP Y+VPF T+DL FKKPEDNGEK +S
Subjt:  VDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTS

Query:  LLTAIGAYAEGFSADPIMRRVLNLWKKLE
        LL AI  YAEGFSADP++RR   LW+KLE
Subjt:  LLTAIGAYAEGFSADPIMRRVLNLWKKLE

AT3G52050.3 5'-3' exonuclease family protein6.4e-10058.97Show/hide
Query:  KLTKNQQQVVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSV
        K   +   VVFDHD                  G  FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIE       VPGVEADDVIGTLA+RS+
Subjt:  KLTKNQQQVVFDHD------------------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSV

Query:  AAGCKVRVVSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQF
        +AG KVRVVSPDKDFFQI+SPSLRLLR+ PRG                                             S M SFG+EDFA+K+G LEP+QF
Subjt:  AAGCKVRVVSPDKDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQF

Query:  VDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTS
        VD+++L GDKSDNIPGVDGIGNV+AV+LI+RFGTLENLLQ VD++++ +I++ L+ +A+QAILSK LA+LRSDLP Y+VPF T+DL FKKPEDNGEK +S
Subjt:  VDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTS

Query:  LLTAIGAYAEGFSADPIMRRVLNLWKKLE
        LL AI  YAEGFSADP++RR   LW+KLE
Subjt:  LLTAIGAYAEGFSADPIMRRVLNLWKKLE

AT3G52050.4 5'-3' exonuclease family protein2.6e-10161.2Show/hide
Query:  KLTKNQQQVVFDHD------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPD
        K   +   VVFDHD      G  FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIE       VPGVEADDVIGTLA+RS++AG KVRVVSPD
Subjt:  KLTKNQQQVVFDHD------GSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPD

Query:  KDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSD
        KDFFQI+SPSLRLLR+ PRG                                             S M SFG+EDFA+K+G LEP+QFVD+++L GDKSD
Subjt:  KDFFQIISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSD

Query:  NIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGF
        NIPGVDGIGNV+AV+LI+RFGTLENLLQ VD++++ +I++ L+ +A+QAILSK LA+LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAEGF
Subjt:  NIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGF

Query:  SADPIMRRVLNLWKKLE
        SADP++RR   LW+KLE
Subjt:  SADPIMRRVLNLWKKLE

AT3G52050.5 5'-3' exonuclease family protein1.4e-7059.57Show/hide
Query:  KLTKNQQQVVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQI
        K   +   VVFDHDG  FRHT YPAYKSNRPPTPDTIVQGLQYLKASIK+MS+KVIE       VPGVEADDVIGTLA+RS++AG KVRVVSPDKDFFQI
Subjt:  KLTKNQQQVVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQI

Query:  ISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVD
        +SPSLRLLR+ PRG                                             S M SFG+EDFA+K+G LEP+QFVD+++L GDKSDNIPGVD
Subjt:  ISPSLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVD

Query:  GIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKM
        GIGNV+AV+LI+RFGTLENLLQ VD++++ +I+++
Subjt:  GIGNVNAVQLITRFGTLENLLQHVDQVEDERIRKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTTTATTGTCAAGGAAACTAACAAAAAATCAACAACAGGTTGTGTTTGATCATGATGGATCCACTTTTCGTCACACACGTTACCCTGCATACAAGAGTAACAG
GCCACCTACACCTGATACCATAGTCCAGGGGCTCCAATACTTAAAGGCATCCATAAAGTCCATGTCCGTCAAGGTGATTGAGGTCTCTCCTATACAAGGAAACGTACCTG
GAGTGGAGGCTGATGATGTGATTGGCACATTGGCTTTGAGAAGTGTTGCTGCTGGGTGTAAGGTTCGTGTTGTCTCCCCTGACAAAGACTTCTTCCAGATTATATCTCCT
TCATTACGTCTTTTACGAATAGCTCCACGTGGGTGGGTTCCACGAGAGTCTGGGGAAGGAAATCCCTTCATTGTGAGGGTTGAACAAGAGCATGTGGCTTCAATTTTTGG
ATTTGATTTTATGGTACCTTCTTTGAAACTTCGACATTTACTAGCTTCTCTGCCCATTTCTAGGATGGTTTCTTTTGGGCTGGAGGATTTTGCCGAAAAATATGGAGTTC
TGGAACCTTCTCAGTTCGTTGATGTGATGTCTTTAGTTGGTGACAAATCTGATAATATTCCAGGAGTCGATGGAATTGGAAATGTCAATGCTGTGCAACTTATCACTAGA
TTCGGCACATTAGAAAATTTGTTGCAACATGTTGATCAAGTGGAAGATGAACGTATAAGGAAGATGTTGGTAACAAATGCTGAACAAGCTATCTTGAGCAAGGACCTGGC
AATCTTGCGATCTGATCTTCCGCTCTATATGGTACCATTTACCACCAGAGATCTTTTATTCAAGAAACCGGAGGATAATGGGGAGAAATTCACAAGCCTCTTAACTGCTA
TTGGTGCATATGCAGAAGGATTCTCAGCTGATCCAATTATGAGGAGAGTACTAAACTTATGGAAGAAGCTTGAAAAAAAGATGTTAGCAGAGGATAATGTTGTTGCGAAT
GAATACGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTTTATTGTCAAGGAAACTAACAAAAAATCAACAACAGGTTGTGTTTGATCATGATGGATCCACTTTTCGTCACACACGTTACCCTGCATACAAGAGTAACAG
GCCACCTACACCTGATACCATAGTCCAGGGGCTCCAATACTTAAAGGCATCCATAAAGTCCATGTCCGTCAAGGTGATTGAGGTCTCTCCTATACAAGGAAACGTACCTG
GAGTGGAGGCTGATGATGTGATTGGCACATTGGCTTTGAGAAGTGTTGCTGCTGGGTGTAAGGTTCGTGTTGTCTCCCCTGACAAAGACTTCTTCCAGATTATATCTCCT
TCATTACGTCTTTTACGAATAGCTCCACGTGGGTGGGTTCCACGAGAGTCTGGGGAAGGAAATCCCTTCATTGTGAGGGTTGAACAAGAGCATGTGGCTTCAATTTTTGG
ATTTGATTTTATGGTACCTTCTTTGAAACTTCGACATTTACTAGCTTCTCTGCCCATTTCTAGGATGGTTTCTTTTGGGCTGGAGGATTTTGCCGAAAAATATGGAGTTC
TGGAACCTTCTCAGTTCGTTGATGTGATGTCTTTAGTTGGTGACAAATCTGATAATATTCCAGGAGTCGATGGAATTGGAAATGTCAATGCTGTGCAACTTATCACTAGA
TTCGGCACATTAGAAAATTTGTTGCAACATGTTGATCAAGTGGAAGATGAACGTATAAGGAAGATGTTGGTAACAAATGCTGAACAAGCTATCTTGAGCAAGGACCTGGC
AATCTTGCGATCTGATCTTCCGCTCTATATGGTACCATTTACCACCAGAGATCTTTTATTCAAGAAACCGGAGGATAATGGGGAGAAATTCACAAGCCTCTTAACTGCTA
TTGGTGCATATGCAGAAGGATTCTCAGCTGATCCAATTATGAGGAGAGTACTAAACTTATGGAAGAAGCTTGAAAAAAAGATGTTAGCAGAGGATAATGTTGTTGCGAAT
GAATACGACTAG
Protein sequenceShow/hide protein sequence
MASLLSRKLTKNQQQVVFDHDGSTFRHTRYPAYKSNRPPTPDTIVQGLQYLKASIKSMSVKVIEVSPIQGNVPGVEADDVIGTLALRSVAAGCKVRVVSPDKDFFQIISP
SLRLLRIAPRGWVPRESGEGNPFIVRVEQEHVASIFGFDFMVPSLKLRHLLASLPISRMVSFGLEDFAEKYGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITR
FGTLENLLQHVDQVEDERIRKMLVTNAEQAILSKDLAILRSDLPLYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAEGFSADPIMRRVLNLWKKLEKKMLAEDNVVAN
EYD