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CmoCh03G000830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G000830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING/U-box superfamily protein
Genome locationCmo_Chr03:1242215..1245803
RNA-Seq ExpressionCmoCh03G000830
SyntenyCmoCh03G000830
Gene Ontology termsGO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type
IPR027214 - Cystatin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053163.1 cysteine proteinase inhibitor 5-like [Cucumis melo var. makuwa]5.2e-2253.04Show/hide
Query:  LQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQ-TGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSWELLA
        +Q  K  +WK+IED KDPY++++GRF++  F  +Q   +  TFIRVV+ E L V EG +YR+V+E++ + V QS     ELYVAKVLDHK P  SW LL+
Subjt:  LQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQ-TGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSWELLA

Query:  FESSALLALPSGLAI
        FE S LLALPS LA+
Subjt:  FESSALLALPSGLAI

KAG6590492.1 hypothetical protein SDJN03_15915, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1650Show/hide
Query:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW
        QD V  Q  K  DW+ I++  DPYV E+GRFA+M   H+  G  W F+ V++C+T  V +G LY +VIEV   IV+ SY  SIELY A VLD KQ  +SW
Subjt:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW

Query:  ELLAFE
        EL++F+
Subjt:  ELLAFE

KAG6590493.1 hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1748.11Show/hide
Query:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW
        QD V  Q  K  DW+ I++  DPYVQE+GRFA+M  +H   G  W+F+ VV+CE+L V +G LYR++I+V  +IVV  +  +IE+Y A VLD K+  +SW
Subjt:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW

Query:  ELLAFE
        EL++F+
Subjt:  ELLAFE

KAG6603238.1 Cysteine proteinase inhibitor 6, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5895.93Show/hide
Query:  MSSVQDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQP
        MSSVQDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAM  FIHHQTGK WTFIRVVN ETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQP
Subjt:  MSSVQDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQP

Query:  RKSWELLAFESSALLALPSGLAI
        RKSWELLAFESSALLALP GLAI
Subjt:  RKSWELLAFESSALLALPSGLAI

KAG6603243.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.3e-16100Show/hide
Query:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
        VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
Subjt:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST

TrEMBL top hitse value%identityAlignment
A0A5A7UB42 Cysteine proteinase inhibitor 5-like2.5e-2253.04Show/hide
Query:  LQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQ-TGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSWELLA
        +Q  K  +WK+IED KDPY++++GRF++  F  +Q   +  TFIRVV+ E L V EG +YR+V+E++ + V QS     ELYVAKVLDHK P  SW LL+
Subjt:  LQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQ-TGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSWELLA

Query:  FESSALLALPSGLAI
        FE S LLALPS LA+
Subjt:  FESSALLALPSGLAI

A0A6J1BU61 cysteine proteinase inhibitor 6-like8.2e-1346.67Show/hide
Query:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW
        Q+D  L   KP  W+ I++I DPYVQE+GRFA+M   H+  G ++ FIRVV+ E+  V  G  Y +VIEVK  I++ S   SI+ + A +LD K   KSW
Subjt:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW

Query:  ELLAF
         LL+F
Subjt:  ELLAF

A0A6J1EKL4 E3 ubiquitin-protein ligase arkadia-like3.5e-16100Show/hide
Query:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
        VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
Subjt:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST

A0A6J1GCT2 uncharacterized protein LOC1114530272.8e-1345Show/hide
Query:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW
        Q+D  L   K  DW+ + ++ D YVQE+GRFA+M  +H   G   TFI VV+ E+  V EG  Y +V+EVK   V+     +I+LYVA VLD KQ  KSW
Subjt:  QDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSW

Query:  ELLAFESSALLALPSGLAIY
        ELLAF+   L  +  G  I+
Subjt:  ELLAFESSALLALPSGLAIY

A0A6J1HV57 E3 ubiquitin-protein ligase RNF181-like1.1e-1494.74Show/hide
Query:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDS
        VIRTPCGH YHESCIF+WLNLHNSCPLCKRPLPLEEDS
Subjt:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDS

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING16.4e-0747.37Show/hide
Query:  TPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEE
        T   + PC H+YH+ C+  WL LHNSCP+C+  LP ++
Subjt:  TPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEE

Q6AXU4 E3 ubiquitin-protein ligase RNF1819.9e-0836.84Show/hide
Query:  PPPNPKPI--KLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDS
        PPP  K +   L ++ + S+ +    P  +L       VI  PC H++H +CI  WL+  NSCPLC+  LP ++DS
Subjt:  PPPNPKPI--KLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDS

Q94AK4 E3 ubiquitin-protein ligase RZF18.4e-0737.8Show/hide
Query:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
        PPP PK        IK+ +  L S+ S   V     FE + +   + PC H+YH  CI  WL  HNSCP+C++ LP    S+
Subjt:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST

Q9CY62 E3 ubiquitin-protein ligase RNF1812.0e-0841.56Show/hide
Query:  PPPNPKPI--KLWKSDLISASSFPGVPPQIL-FETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDS
        PPP  K +   L ++ + SA +    P  +L FE   T VI  PC H++H +CI  WL+  NSCPLC+  LP ++DS
Subjt:  PPPNPKPI--KLWKSDLISASSFPGVPPQIL-FETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDS

Q9VHI7 E3 ubiquitin-protein ligase Iruka8.4e-0756.25Show/hide
Query:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPL
        V + PC H+YHE+CI  WLNLH++CP+C++ L
Subjt:  VIRTPCGHVYHESCIFQWLNLHNSCPLCKRPL

Arabidopsis top hitse value%identityAlignment
AT1G60360.1 RING/U-box superfamily protein4.6e-0863.33Show/hide
Query:  PCGHVYHESCIFQWLNLHNSCPLCKRPLPL
        PC H+YH+ CI  WL L+NSCP+C+R LPL
Subjt:  PCGHVYHESCIFQWLNLHNSCPLCKRPLPL

AT2G44330.1 RING/U-box superfamily protein1.6e-0841.18Show/hide
Query:  FTPPPPNPKPIKLWKSDLISASSFPGVPPQILFETRPTPVI-----RTPCGHVYHESCIFQWLNLHNSCPLCKRPLPL---EEDS
        F  P  +   IK+  S L SASS     P  +   R   V+     R PC H+YH  CI  WL  HNSCPLC+  LP+   E+DS
Subjt:  FTPPPPNPKPIKLWKSDLISASSFPGVPPQILFETRPTPVI-----RTPCGHVYHESCIFQWLNLHNSCPLCKRPLPL---EEDS

AT3G56580.1 RING/U-box superfamily protein6.0e-0837.8Show/hide
Query:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
        PPP PK        IK+ +  L S+ S   V     FE + +   + PC H+YH  CI  WL  HNSCP+C++ LP    S+
Subjt:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST

AT3G56580.2 RING/U-box superfamily protein6.0e-0837.8Show/hide
Query:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
        PPP PK        IK+ +  L S+ S   V     FE + +   + PC H+YH  CI  WL  HNSCP+C++ LP    S+
Subjt:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST

AT3G56580.3 RING/U-box superfamily protein6.0e-0837.8Show/hide
Query:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST
        PPP PK        IK+ +  L S+ S   V     FE + +   + PC H+YH  CI  WL  HNSCP+C++ LP    S+
Subjt:  PPPNPK-------PIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTGTTCAAGACGATGTCGGACTCCAAGCTTGCAAGCCTCATGATTGGAAATCAATAGAAGATATCAAAGACCCGTACGTGCAAGAGATTGGAAGGTTTGCTAT
GATGAATTTTATACACCATCAAACGGGGAAAGCGTGGACGTTCATTCGTGTAGTGAACTGCGAGACTCTAGCCGTGGAGGAAGGAATGTTATACCGTGTGGTTATAGAGG
TGAAAACTGATATAGTTGTTCAATCTTATCTAGGTTCTATTGAATTGTATGTGGCTAAGGTGCTAGATCATAAACAACCTCGCAAATCTTGGGAACTCTTAGCTTTTGAA
AGCTCTGCCCTTCTAGCTTTGCCTTCTGGCTTAGCCATCTATATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATAAAGCTTTGGAAGTCCGATCTGATCTCTGC
TTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCACTCCGGTGATAAGGACTCCCTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGC
TCAACCTCCATAACTCTTGCCCTCTCTGTAAACGCCCACTGCCATTGGAGGAGGACTCAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTGTTCAAGACGATGTCGGACTCCAAGCTTGCAAGCCTCATGATTGGAAATCAATAGAAGATATCAAAGACCCGTACGTGCAAGAGATTGGAAGGTTTGCTAT
GATGAATTTTATACACCATCAAACGGGGAAAGCGTGGACGTTCATTCGTGTAGTGAACTGCGAGACTCTAGCCGTGGAGGAAGGAATGTTATACCGTGTGGTTATAGAGG
TGAAAACTGATATAGTTGTTCAATCTTATCTAGGTTCTATTGAATTGTATGTGGCTAAGGTGCTAGATCATAAACAACCTCGCAAATCTTGGGAACTCTTAGCTTTTGAA
AGCTCTGCCCTTCTAGCTTTGCCTTCTGGCTTAGCCATCTATATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATAAAGCTTTGGAAGTCCGATCTGATCTCTGC
TTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCACTCCGGTGATAAGGACTCCCTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGC
TCAACCTCCATAACTCTTGCCCTCTCTGTAAACGCCCACTGCCATTGGAGGAGGACTCAACCTGA
Protein sequenceShow/hide protein sequence
MSSVQDDVGLQACKPHDWKSIEDIKDPYVQEIGRFAMMNFIHHQTGKAWTFIRVVNCETLAVEEGMLYRVVIEVKTDIVVQSYLGSIELYVAKVLDHKQPRKSWELLAFE
SSALLALPSGLAIYIVFTPPPPNPKPIKLWKSDLISASSFPGVPPQILFETRPTPVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEEDST