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CmoCh03G001180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G001180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNatterin-3 like
Genome locationCmo_Chr03:1621573..1622089
RNA-Seq ExpressionCmoCh03G001180
SyntenyCmoCh03G001180
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008998 - Agglutinin domain
IPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603269.1 hypothetical protein SDJN03_03878, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4479.82Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

XP_022967680.1 uncharacterized protein LOC111467133 [Cucurbita maxima]2.7e-4479.82Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

XP_023521953.1 uncharacterized protein LOC111785802 [Cucurbita pepo subsp. pepo]2.7e-4479.82Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

XP_023543559.1 uncharacterized protein LOC111803409 [Cucurbita pepo subsp. pepo]2.7e-4479.82Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

XP_023544075.1 uncharacterized protein LOC111803769 [Cucurbita pepo subsp. pepo]2.7e-4479.82Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

TrEMBL top hitse value%identityAlignment
A0A6J1DPH8 uncharacterized protein LOC1110230062.4e-3870.18Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLK++KED                     EVEPAKVGKGYVNIRCCYNNKYWVCPS+ T+YVVA ADE NEDQSNWACTLFEP 
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        +D  H+AYRIKHVY
Subjt:  FDSDHQAYRIKHVY

A0A6J1DS59 uncharacterized protein LOC1110230231.2e-3263.39Show/hide
Query:  VLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIF
        +LP+Y   +S ADDLYL++VKED                     EVEPAKVGK YVNIRCCY+NKYWV PS+N+RYVVA ADEPNED+SNW+CTLFEPI 
Subjt:  VLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIF

Query:  DSDHQAYRIKHV
        DS +QAYRIKHV
Subjt:  DSDHQAYRIKHV

A0A6J1ELG9 uncharacterized protein LOC1114355021.1e-4378.07Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKG+VNIRCCYNNKYWVCPSINT+YVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

A0A6J1HV52 uncharacterized protein LOC1114671331.3e-4479.82Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        MVLPRY AFKSKADDLYLKYVKED                     EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  FDSDHQAYRIKHVY
        FD DHQAYRIKHVY
Subjt:  FDSDHQAYRIKHVY

D7U3H5 Uncharacterized protein6.0e-2150Show/hide
Query:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI
        M LPRY   KSK +D YL+Y+ ED                     +VE AK GKG V+IRCCYNNKYWV  S N  ++VA ADEP+EDQS+W+CTLFEP+
Subjt:  MVLPRYAAFKSKADDLYLKYVKED---------------------EVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPI

Query:  -FDSDHQAYRIKHV
          D + Q  R +HV
Subjt:  -FDSDHQAYRIKHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTCCCAAGGTACGCGGCTTTCAAATCCAAGGCAGATGACTTGTATTTGAAGTACGTAAAGGAAGATGAAGTGGAGCCTGCTAAAGTTGGCAAGGGCTAT
GTGAATATAAGATGTTGTTATAACAACAAATATTGGGTTTGTCCTTCAATCAATACTCGATATGTGGTTGCAGTAGCTGATGAACCAAATGAAGATCAATCCAAC
TGGGCGTGTACGTTGTTTGAACCCATCTTTGATTCGGATCATCAAGCCTATCGAATTAAGCATGTCTATCCTATCGAATTAAGCATGTCTACTTTGGCTACAATA
CATTTGGAGGGATGGCTTAACTTGAGACCGGTGCTTGTATATGGGATATTCAACTCCAGACGCCAACCTTTGCGATCTTCATACTGCTATAGATTGAGAATCATT
CTATGTTTTACCCAAATACGTTGCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTCCCAAGGTACGCGGCTTTCAAATCCAAGGCAGATGACTTGTATTTGAAGTACGTAAAGGAAGATGAAGTGGAGCCTGCTAAAGTTGGCAAGGGCTAT
GTGAATATAAGATGTTGTTATAACAACAAATATTGGGTTTGTCCTTCAATCAATACTCGATATGTGGTTGCAGTAGCTGATGAACCAAATGAAGATCAATCCAAC
TGGGCGTGTACGTTGTTTGAACCCATCTTTGATTCGGATCATCAAGCCTATCGAATTAAGCATGTCTATCCTATCGAATTAAGCATGTCTACTTTGGCTACAATA
CATTTGGAGGGATGGCTTAACTTGAGACCGGTGCTTGTATATGGGATATTCAACTCCAGACGCCAACCTTTGCGATCTTCATACTGCTATAGATTGAGAATCATT
CTATGTTTTACCCAAATACGTTGCATTTAA
Protein sequenceShow/hide protein sequence
MVLPRYAAFKSKADDLYLKYVKEDEVEPAKVGKGYVNIRCCYNNKYWVCPSINTRYVVAVADEPNEDQSNWACTLFEPIFDSDHQAYRIKHVYPIELSMSTLATI
HLEGWLNLRPVLVYGIFNSRRQPLRSSYCYRLRIILCFTQIRCI