CuGenDBv2

Gene ID	CmoCh03G002880
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Genome location	Cmo_Chr03:4107023..4114914
RNA-Seq Expression	CmoCh03G002880
Synteny	CmoCh03G002880
Gene Ontology terms	GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR017384 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033699.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-36

98.68

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Query:  HPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        +PEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
Subjt:  HPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

XP_004142669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus]

1.2e-28

93.85

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Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

XP_022950918.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata]

4.5e-31

100

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Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

XP_022966508.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima]

2.1e-28

93.85

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Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
        M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA SH
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH

XP_038881013.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida]

3.3e-29

95.38

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Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2Y7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

6.0e-29

93.85

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Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

A0A1S3CIY2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

1.0e-28

93.85

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Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

A0A5D3C7B6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

1.0e-28

93.85

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Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

A0A6J1GH44 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

2.2e-31

100

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Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS

A0A6J1HU02 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

1.0e-28

93.85

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Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
        M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA SH
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH

SwissProt top hits

e value

%identity

Alignment

Q9C9Z5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

1.8e-22

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Query:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS
        WLEA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Subjt:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS

Arabidopsis top hits

e value

%identity

Alignment

AT3G08610.1 unknown protein

1.3e-23

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Query:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS
        WLEA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Subjt:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS

Sequences

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CDS sequence

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mRNA sequence

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ATGGAAGAGGGATGTCGGAAGATGGAGACGGCGATGTCGCCGGCGAAGACGGTGGATAAGAACAGTTCCGACGATGGAGGCGGAGGCGGAGGCAGAGGTCAGGAG
CCATCGGAGGAACACCCCGAGATTTCAACAGCAGATAGAGAAATGGGATGGAGATGGCTGGAAGCGGCACTTCCTCTGGGAATCATTGCCGGAATGCTTTGTATA
ATGGGGAATGCTCAATATCATATCCACAAAGCAGCCCATGGCCGGCCGAAGCACATCGGTAATGATATGTGGGACGTTGCCATGGAACGCAGGGACAAGAAGCTC
GTGGAGAATGTCTCCGCCGGTTCGCATAGTTAATTTTATTGACCTGCATCCCCTGGTGCAGGAGTTGTCACGGATGCACTCTTGATGAAGGAATAAAAGTTTCTA
TTGCAGAATGCAGATGTCTGTACGATGATGATCACTGTCGTGTATTATCAATTTGTTTCATTGTTCCTATGTTTATCTGAACATAAGTATAATTGATCATCAAGA
ATTTGCTTCTCCATATCAAAGTAGATTTTCTCCTGAATGTTGACTTTTGAGTTTCTGTTTTCTGGAACTAGCTTTACCTCCTTGAGCAGGAGGAAACCCTGTACT
CAAATGATGATGAATAGCTTTGAATCCATGTAAGTTTTTATTTTCTGTTCACCCTTTTCCCATAGGAAACTCATGATATTAGATTTTGATGCAATAATAACAAGA
ACTAGAGTTGAAGTAGAAGGCATGATAGTTTATGTTTCTGAATCATGTGCCATAATGTCTGTGCTGCTACTCTCCATATCTCCCATAG

Protein sequence

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MEEGCRKMETAMSPAKTVDKNSSDDGGGGGGRGQEPSEEHPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKL
VENVSAGSHS

CmoCh03G002880 (gene) of Cucurbita moschata (Rifu) v1 genome