; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G003640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G003640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein root UVB sensitive 5-like isoform X2
Genome locationCmo_Chr03:4616552..4618389
RNA-Seq ExpressionCmoCh03G003640
SyntenyCmoCh03G003640
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR003169 - GYF domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022949767.1 uncharacterized protein LOC111453057 isoform X1 [Cucurbita moschata]2.1e-2394.92Show/hide
Query:  ELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYEARA
        ELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYE ++
Subjt:  ELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYEARA
XP_022978316.1 uncharacterized protein LOC111478340 isoform X1 [Cucurbita maxima]3.7e-0478.79Show/hide
Query:  HPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPL
        HPFQVDGLVIFLMMFQNNGAC QTS    T  L
Subjt:  HPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPL
XP_022978317.1 protein root UVB sensitive 5-like isoform X2 [Cucurbita maxima]3.7e-0492.86Show/hide
Query:  LAVQTAPLILLLHASYLFSTNGFPWQSY
        LAVQ APLILLLHASYLFST GFPWQSY
Subjt:  LAVQTAPLILLLHASYLFSTNGFPWQSY
XP_022978319.1 uncharacterized protein LOC111478340 isoform X3 [Cucurbita maxima]3.7e-0492.86Show/hide
Query:  LAVQTAPLILLLHASYLFSTNGFPWQSY
        LAVQ APLILLLHASYLFST GFPWQSY
Subjt:  LAVQTAPLILLLHASYLFSTNGFPWQSY
XP_023545144.1 uncharacterized protein LOC111804533 [Cucurbita pepo subsp. pepo]8.9e-2294.74Show/hide
Query:  SELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYE
        SELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFST GFPW SY+
Subjt:  SELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYE
TrEMBL top hitse value%identityAlignment
A0A6J1GD11 uncharacterized protein LOC111453057 isoform X11.0e-2394.92Show/hide
Query:  ELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYEARA
        ELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYE ++
Subjt:  ELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYEARA
A0A6J1IKS4 protein root UVB sensitive 5-like isoform X21.8e-0492.86Show/hide
Query:  LAVQTAPLILLLHASYLFSTNGFPWQSY
        LAVQ APLILLLHASYLFST GFPWQSY
Subjt:  LAVQTAPLILLLHASYLFSTNGFPWQSY
A0A6J1IMC9 uncharacterized protein LOC111478340 isoform X11.8e-0478.79Show/hide
Query:  HPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPL
        HPFQVDGLVIFLMMFQNNGAC QTS    T  L
Subjt:  HPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPL
A0A6J1ITS0 uncharacterized protein LOC111478340 isoform X31.8e-0492.86Show/hide
Query:  LAVQTAPLILLLHASYLFSTNGFPWQSY
        LAVQ APLILLLHASYLFST GFPWQSY
Subjt:  LAVQTAPLILLLHASYLFSTNGFPWQSY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATTATATTGAATTTTTCAGTGAGTTGCATCCTTTCCAGGTGGACGGTTTGGTAATCTTTTTGATGATGTTCCAGAACAATGGCGCATGTATGCAGACT
TCATTGGCAGTGCAGACAGCACCTTTGATCTTGCTACTCCATGCATCCTATCTATTTTCTACCAATGGCTTCCCTTGGCAATCTTACGAAGCAAGGGCTCGCATA
AGGGGACCATATAGCAGTGTAGATATTATGCGAAGAAAGAATGATGCATATTTTTCTAGACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATTATATTGAATTTTTCAGTGAGTTGCATCCTTTCCAGGTGGACGGTTTGGTAATCTTTTTGATGATGTTCCAGAACAATGGCGCATGTATGCAGACT
TCATTGGCAGTGCAGACAGCACCTTTGATCTTGCTACTCCATGCATCCTATCTATTTTCTACCAATGGCTTCCCTTGGCAATCTTACGAAGCAAGGGCTCGCATA
AGGGGACCATATAGCAGTGTAGATATTATGCGAAGAAAGAATGATGCATATTTTTCTAGACGTTGAAGAGGTGAGTAAGGGGCTAATATCTTCTCAACACTGTTG
AACTTGAAATTCAATCTCAATTGCTCTTTTTAGTGGGGAGGAATTGTTTTCGTATACTGGACTTAAGGAAAAAAAGTCCCTTATCTGCCTTGCTTATCTGCCTTG
TTGTGAGGGAATCAAGTGATTCTCTTTTTTTTTTTTTTTCGCTTTGTTTGGGG
Protein sequenceShow/hide protein sequence
MEDYIEFFSELHPFQVDGLVIFLMMFQNNGACMQTSLAVQTAPLILLLHASYLFSTNGFPWQSYEARARIRGPYSSVDIMRRKNDAYFSRR