; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G003690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G003690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S31, chloroplastic
Genome locationCmo_Chr03:4646629..4647158
RNA-Seq ExpressionCmoCh03G003690
SyntenyCmoCh03G003690
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603588.1 30S ribosomal protein S31, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2398.41Show/hide
Query:  MASLPFRLLPRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAGDKKTEKGKRFKHSFGN
        MASLPFRL PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAGDKKTEKGKRFKHSFGN
Subjt:  MASLPFRLLPRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAGDKKTEKGKRFKHSFGN

KAG7033775.1 30S ribosomal protein S31, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-1361.54Show/hide
Query:  MASLPFRLLPRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAG---DKKTEKGKRFK---------HSFGNVCVSSTLFVF-FDSFS
        MASLPFRL PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAG    ++ E G   +          SF ++   +  F F FD FS
Subjt:  MASLPFRLLPRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAG---DKKTEKGKRFK---------HSFGNVCVSSTLFVF-FDSFS

XP_004147884.1 30S ribosomal protein S31, chloroplastic [Cucumis sativus]6.4e-1370.27Show/hide
Query:  MASLPFRLL------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        MASLPF LL      PR FS SKSE LG SLRASST SLAIST S PSSIPA     GDKKTE+GKRF HS+GN
Subjt:  MASLPFRLL------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]5.4e-1265.38Show/hide
Query:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        M SLPF LL          P  FS SKSETLG SLRASST SLAIST S PSSIPA     GDKKTE+GKRF HS+GN
Subjt:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]1.4e-1267.95Show/hide
Query:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        MASLPF LL          PR FS SKSETLG SLRASST SLA STTS PSSIPA     GDKKTEKGKRF  S+GN
Subjt:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

TrEMBL top hitse value%identityAlignment
A0A0A0KXY4 Uncharacterized protein3.1e-1370.27Show/hide
Query:  MASLPFRLL------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        MASLPF LL      PR FS SKSE LG SLRASST SLAIST S PSSIPA     GDKKTE+GKRF HS+GN
Subjt:  MASLPFRLL------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

A0A1S3BL51 30S ribosomal protein S31, chloroplastic2.6e-1265.38Show/hide
Query:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        M SLPF LL          P  FS SKSETLG SLRASST SLAIST S PSSIPA     GDKKTE+GKRF HS+GN
Subjt:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

A0A5A7TU27 30S ribosomal protein S312.6e-1265.38Show/hide
Query:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        M SLPF LL          P  FS SKSETLG SLRASST SLAIST S PSSIPA     GDKKTE+GKRF HS+GN
Subjt:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic2.2e-1165.38Show/hide
Query:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        MASLPF LL          PR FS SKSETLG SLRA ST SLA S TS PSS+PA     GDKKTEKGKRF HS+GN
Subjt:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic5.5e-1065.38Show/hide
Query:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN
        MASLPF LL          PR FS SKSETLG SLR +STG+   S TS PSSIPA     GDKKTEKGKRFKHSFGN
Subjt:  MASLPFRLL----------PRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPA-----GDKKTEKGKRFKHSFGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38140.1 plastid-specific ribosomal protein 41.5e-0454.1Show/hide
Query:  LPRS-FSISKSETLGISLRASSTGSLAISTTSCPSSIP-----AGDKKTEKGKRFKHSFGN
        LP S  S S SET G+SL +  T   ++ST+S  SSIP      GD+KT KGKRF HSFGN
Subjt:  LPRS-FSISKSETLGISLRASSTGSLAISTTSCPSSIP-----AGDKKTEKGKRFKHSFGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTTCCTTTCAGACTGCTTCCTCGTTCTTTCTCCATCTCCAAATCTGAAACCCTAGGAATATCTCTGCGTGCTTCGTCTACTGGTTCTCTCGCAATCTCTAC
AACTTCGTGTCCTTCTTCAATTCCTGCTGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAAGCACTCGTTCGGAAATGTATGTGTCTCATCTACTCTCTTCGTTTTCT
TCGATTCTTTTTCTGACTGCAAGGCCTCGGAACAAGACGAAAGGGAGAGGGACGCCGAGAGTACGAACTCCTCCTTCTCCGCCTAG
mRNA sequenceShow/hide mRNA sequence
CTTTTACAGGCGCTTGCTCGCTCTGCTTCATCTTCATCCGTCCATGGCTTCTCTTCCTTTCAGACTGCTTCCTCGTTCTTTCTCCATCTCCAAATCTGAAACCCTAGGAA
TATCTCTGCGTGCTTCGTCTACTGGTTCTCTCGCAATCTCTACAACTTCGTGTCCTTCTTCAATTCCTGCTGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAAGCAC
TCGTTCGGAAATGTATGTGTCTCATCTACTCTCTTCGTTTTCTTCGATTCTTTTTCTGACTGCAAGGCCTCGGAACAAGACGAAAGGGAGAGGGACGCCGAGAGTACGAA
CTCCTCCTTCTCCGCCTAG
Protein sequenceShow/hide protein sequence
MASLPFRLLPRSFSISKSETLGISLRASSTGSLAISTTSCPSSIPAGDKKTEKGKRFKHSFGNVCVSSTLFVFFDSFSDCKASEQDERERDAESTNSSFSA