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CmoCh03G004090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G004090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncopper ion transmembrane transporters
Genome locationCmo_Chr03:4856294..4862231
RNA-Seq ExpressionCmoCh03G004090
SyntenyCmoCh03G004090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603623.1 hypothetical protein SDJN03_04232, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3395Show/hide
Query:  MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLLSQSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMRWLAEHR
        MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLLSQSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMR  AE +
Subjt:  MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLLSQSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMRWLAEHR
KAG7033810.1 hypothetical protein SDJN02_03535, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3293.75Show/hide
Query:  MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLLSQSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMRWLAEHR
        MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLL QSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMR  AE +
Subjt:  MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLLSQSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMRWLAEHR
XP_038883722.1 uncharacterized protein LOC120074621 [Benincasa hispida]4.4e-0546.88Show/hide
Query:  MSILPIPLAIPSPLRPPLFSLSVS-------GWFKPPL-LLSQSNSDRFLGYNPNS----------NGRRSKKDKQLLKAWLCRERQIYEMRWLAE
        M ILPI LAIP+PLRPPLFS S S        +F   + ++S+S +   +G  P +             ++KK KQLLKA LCRERQIYEMR  AE
Subjt:  MSILPIPLAIPSPLRPPLFSLSVS-------GWFKPPL-LLSQSNSDRFLGYNPNS----------NGRRSKKDKQLLKAWLCRERQIYEMRWLAE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37920.1 copper ion transmembrane transporters4.0e-0477.78Show/hide
Query:  RSKKDKQLLKAWLCRERQIYEMRWLAE
        ++KK KQLLKA LCRERQIYEMR  AE
Subjt:  RSKKDKQLLKAWLCRERQIYEMRWLAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTCTCCCAATTCCTCTTGCAATTCCGAGCCCTCTTCGTCCGCCCTTATTCTCTCTCTCTGTCTCTGGCTGGTTCAAACCACCTCTCTTACTTTCCCAATCGAA
TTCCGATCGCTTCTTAGGCTACAACCCTAATTCGAATGGGCGTAGATCCAAGAAAGATAAGCAGCTGCTTAAGGCTTGGCTGTGCCGCGAACGCCAGATATATGAGATGC
GCTGGTTAGCTGAGCATCGGCCTCCAGAAGGTTCAGAACCAGAATACAGATTCCTTATCTTTCATTCGTGCTTAAAGCACCAGCAATCAAAGACCAACGCACGTTCCACA
GAGACCCCAATCACAGTAAATTTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTCTCCCAATTCCTCTTGCAATTCCGAGCCCTCTTCGTCCGCCCTTATTCTCTCTCTCTGTCTCTGGCTGGTTCAAACCACCTCTCTTACTTTCCCAATCGAA
TTCCGATCGCTTCTTAGGCTACAACCCTAATTCGAATGGGCGTAGATCCAAGAAAGATAAGCAGCTGCTTAAGGCTTGGCTGTGCCGCGAACGCCAGATATATGAGATGC
GCTGGTTAGCTGAGCATCGGCCTCCAGAAGGTTCAGAACCAGAATACAGATTCCTTATCTTTCATTCGTGCTTAAAGCACCAGCAATCAAAGACCAACGCACGTTCCACA
GAGACCCCAATCACAGTAAATTTCTTTTGAAGGGTCGTCTTCAACTATCAGAATGATTCAGACCCAAAAGTTTTTCTCTTTTGTGGGCCAGGCAGGTATGTTCTTCTAAG
TTGAAACTTTGGTATTGTGACAGTCTAAACCCACCGCTAGCCGATATTATCCTTTTTAGGCTTCCCCTCAAGGTTTTTAAAACGCGTTTGTTAGGGAGAGGTATCCACAC
CCTTATAAAGAATGCTTTGTTCCCCTTTCCAACTAACGTGGGATCTCACAATCTACTCCCTCAGCGTCCTTGCTGGCACTCGAGCCTCTCTCCAATCGATGTAGAATCTC
ATAATCCACCCCCTTTGGGGGCCCAACGTTCTCGTTGGTACACTGCTCGGTGTCCACTCCCTTGGTTGGAGAGGGGGGTAGATTATGAGATCCCACGTTGGTTGGGGAGG
GGAACAAAACATTCCTTACAAGGGTGTGAAAACCTCTCTCTAACAGACGCATTTTAAAATCGTGAGGCTGACGGCGATACATAACGGGCTAAAACGAACAATATGTAGTT
GCAGTAGGCTTGGATGGTTGACATAATAAACTATTATGTGTTTAGGATAGGATCGTCCCCTCCACTTAGGAGGAAGAGTTCCAATCTTACTGATGATTGAGGGGACAACA
CAAGCCACAAGCCACTACCCCTTGTATTAGTTGATATGATATGGCCAAACTATGAACACTACACGTTCTTTAGCTCTAAAGATGATTCCGAGTCAGCTACCAATATATTG
TCCTGTCGTTTTTTGTGGTGTTAATCCAAAGAATGCCTTTTTGGGGTTAATTATGAGCCATACGTTTATGCTAATTTGTTGTTTGTTTTGGTTTAATATTTTTCATTTAG
ATGTAAAAGGAATACCAATTAGGTGTCTCAAGGTTATGGAT
Protein sequenceShow/hide protein sequence
MSILPIPLAIPSPLRPPLFSLSVSGWFKPPLLLSQSNSDRFLGYNPNSNGRRSKKDKQLLKAWLCRERQIYEMRWLAEHRPPEGSEPEYRFLIFHSCLKHQQSKTNARST
ETPITVNFF