; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G004890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G004890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionClathrin light chain
Genome locationCmo_Chr03:5229226..5231405
RNA-Seq ExpressionCmoCh03G004890
SyntenyCmoCh03G004890
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0048268 - clathrin coat assembly (biological process)
GO:0072583 - clathrin-dependent endocytosis (biological process)
GO:0030130 - clathrin coat of trans-Golgi network vesicle (cellular component)
GO:0030132 - clathrin coat of coated pit (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0032050 - clathrin heavy chain binding (molecular function)
InterPro domainsIPR000996 - Clathrin light chain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033882.1 Clathrin light chain 1 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-16094.26Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKI EEAEEYKIGFYEKRKLNVESKKVNNREREK               LYLENQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKD-AAAAAATKASSDPA
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKD AAAAAATKASSDPA
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKD-AAAAAATKASSDPA

Query:  PGA--ATATANANGSSHKPQEPTAAEDQIAT
        PGA  ATATANANGSSHKPQEPTAAEDQIAT
Subjt:  PGA--ATATANANGSSHKPQEPTAAEDQIAT

XP_022950550.1 clathrin light chain 1-like isoform X1 [Cucurbita moschata]4.4e-16495.43Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREK               LYLENQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP

Query:  GAATATANANGSSHKPQEPTAAEDQIAT
        GAATATANANGSSHKPQEPTAAEDQIAT
Subjt:  GAATATANANGSSHKPQEPTAAEDQIAT

XP_022950551.1 clathrin light chain 1-like isoform X2 [Cucurbita moschata]8.6e-16093.6Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREK                     EKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP

Query:  GAATATANANGSSHKPQEPTAAEDQIAT
        GAATATANANGSSHKPQEPTAAEDQIAT
Subjt:  GAATATANANGSSHKPQEPTAAEDQIAT

XP_022978887.1 clathrin light chain 1-like isoform X1 [Cucurbita maxima]3.6e-15891.92Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQ PFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKI FYEKRKLN+ESKKVNNREREK               LYLENQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD------AKDGKDAKKEKDAAAAAATKA
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD      AKDGKDAKKEKD AAAAATKA
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD------AKDGKDAKKEKDAAAAAATKA

Query:  SSDPAPGAATATANANGSSHKPQEPTAAEDQIAT
        SSDPAPGAATATANANG+SHKPQEP AAEDQIAT
Subjt:  SSDPAPGAATATANANGSSHKPQEPTAAEDQIAT

XP_023544739.1 clathrin light chain 1-like isoform X1 [Cucurbita pepo subsp. pepo]3.3e-15993.33Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREK               LYLENQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
        LIPNEVPNIEKKRGKKKDEEKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKD KDAKDAKDGKDAKKEKD   AAATKASSDPAP
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP

Query:  GA--ATATANANGSSHKPQEPTAAEDQIAT
        GA  ATATANANGSSHKPQEPTAAEDQIAT
Subjt:  GA--ATATANANGSSHKPQEPTAAEDQIAT

TrEMBL top hitse value%identityAlignment
A0A5A7UC02 Clathrin light chain2.1e-14385.67Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MS FDAYSMDGEDSYGGYGSYTNFSG FPGDADV+VEHTPASPDVFGFDDPSPNYSQAPFDPIH+ENGNGNGYGAAE+EVGDGVFVSDGPILPPP+EMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAI+LEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVES KVNNREREK               LYL NQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDA---KDAKDGKDAKKEKDAAAAAATKASSD
        LIPNEVPNIEKKRG KKD+EKKPSI+VVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDA   KDAKDGKDAK EKD    AATKA SD
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDA---KDAKDGKDAKKEKDAAAAAATKASSD

Query:  PAPGAATATANANGSSHKPQEPTAA----EDQIAT
        P PGAAT    ANG+SHKPQEPT A    EDQ AT
Subjt:  PAPGAATATANANGSSHKPQEPTAA----EDQIAT

A0A6J1GF50 clathrin light chain 1-like isoform X24.2e-16093.6Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREK                     EKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP

Query:  GAATATANANGSSHKPQEPTAAEDQIAT
        GAATATANANGSSHKPQEPTAAEDQIAT
Subjt:  GAATATANANGSSHKPQEPTAAEDQIAT

A0A6J1GG26 Clathrin light chain2.1e-16495.43Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREK               LYLENQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAP

Query:  GAATATANANGSSHKPQEPTAAEDQIAT
        GAATATANANGSSHKPQEPTAAEDQIAT
Subjt:  GAATATANANGSSHKPQEPTAAEDQIAT

A0A6J1IMB1 Clathrin light chain1.8e-15891.92Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQ PFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKI FYEKRKLN+ESKKVNNREREK               LYLENQEKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD------AKDGKDAKKEKDAAAAAATKA
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD      AKDGKDAKKEKD AAAAATKA
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD------AKDGKDAKKEKDAAAAAATKA

Query:  SSDPAPGAATATANANGSSHKPQEPTAAEDQIAT
        SSDPAPGAATATANANG+SHKPQEP AAEDQIAT
Subjt:  SSDPAPGAATATANANGSSHKPQEPTAAEDQIAT

A0A6J1IUJ7 clathrin light chain 1-like isoform X23.4e-15490.12Show/hide
Query:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
        MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQ PFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV
Subjt:  MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGV

Query:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE
        EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKI FYEKRKLN+ESKKVNNREREK                     EKFHKEADKQYWKAIAE
Subjt:  EEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAE

Query:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD------AKDGKDAKKEKDAAAAAATKA
        LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD      AKDGKDAKKEKD AAAAATKA
Subjt:  LIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKD------AKDGKDAKKEKDAAAAAATKA

Query:  SSDPAPGAATATANANGSSHKPQEPTAAEDQIAT
        SSDPAPGAATATANANG+SHKPQEP AAEDQIAT
Subjt:  SSDPAPGAATATANANGSSHKPQEPTAAEDQIAT

SwissProt top hitse value%identityAlignment
O04209 Clathrin light chain 25.6e-5356.76Show/hide
Query:  YGAAEEEVGDGVFVS----DGPILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSI
        YGA     GDG+F S    DGPILPPP+EM  +EG+ALREWRRQNAI+LEEKEKREKEL  +IIEEA++YK  F++K ++  E+ K  NRE+EK      
Subjt:  YGAAEEEVGDGVFVS----DGPILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSI

Query:  HFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE-KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKD
                 LYLENQEKF+ E+ K YWKAIAEL+P EVP IEK+RGKK+ ++ KKP++ V+QGPKPGKPTDL+RMRQILVKLKH PP H+K    PP+++
Subjt:  HFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE-KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKD

Query:  AKDAKDAKDGKDAKKEKDAAAA
        A  A   K+  + K  +   AA
Subjt:  AKDAKDAKDGKDAKKEKDAAAA

Q5Z402 Clathrin light chain 22.1e-6049.53Show/hide
Query:  SAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVS----DGPILPPPTE
        +AFD+ +     S     S+  F    P  A    +  P SP+ + F   +P+       P  M   NG+        + D  F +    +GP+LPPP +
Subjt:  SAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVS----DGPILPPPTE

Query:  MGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKA
        MG +EG+ LREWRRQNAI LEEKEK+EKE+R +II +A+E+K  F EKRKLNVE+ K  NREREK               LYL NQEKFH  ADKQYWKA
Subjt:  MGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKA

Query:  IAELIPNEVPNIEKKRGKK-KDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDG--------KDA-------K
        I+ELIP+E+ NIEK+  KK KD+EKKP I+V+QGPKPGKPTD+SRMRQIL+KLKHTPPPHMKPPPPP A   KD    KDG        KDA       +
Subjt:  IAELIPNEVPNIEKKRGKK-KDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDG--------KDA-------K

Query:  KEKDAAAAAATKASSDPAPGA
         EK AAAAA   A+++P   A
Subjt:  KEKDAAAAAATKASSDPAPGA

Q6Z3A8 Clathrin light chain 31.7e-4951.36Show/hide
Query:  GNGYGAAEE---EVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFL
        G+G G  ++     GDG    DGP+LPPP  M  EEG   REWRRQNA+ LEEKE++E+E R +II EA+E+K  F EKRKLN ++ +  NR+REK    
Subjt:  GNGYGAAEE---EVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFL

Query:  SIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE--------KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMK
                   L+L  QEKFH EA+KQYWKAIAE++P+E+P +E KRGK+++++        K+P ++VVQG KPGKPTDLSRMRQ+L+KLK TPPPHM 
Subjt:  SIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE--------KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMK

Query:  PPPPPPAKDAKDAKDA-KDGKDAKK----EKDAAAAAATKASSDPAPGAATATANAN
        PPPP PAKD     DA KDG+  K     EK AA      A+  P   AA A A AN
Subjt:  PPPPPPAKDAKDAKDA-KDGKDAKK----EKDAAAAAATKASSDPAPGAATATANAN

Q7XKE9 Clathrin light chain 11.2e-5548.05Show/hide
Query:  GYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNAIE
        GYG Y +F  G   D +   E      +       S  +S +PF P              + E+  G    DGPILPPP +MG EEG  LREWRRQNAI 
Subjt:  GYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGVEEGYALREWRRQNAIE

Query:  LEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKK
        LEEKE++EKELR +I+ EAEE+K  FYEKR  N E+ KV+NREREK               +++  QEKFH EADKQYWK+I+ELIP+E+  IEK+   K
Subjt:  LEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKK

Query:  KDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDG-KDAKKEKDAAAAAATKASSDPAPGAATATANANGSSHK
        KD++KKPSI V+QGPKPGKPTDLSRMRQILVKLKH PPPHM  PPP        A  AKDG KD  K+   A A  TK  ++    +    AN + +  +
Subjt:  KDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDG-KDAKKEKDAAAAAATKASSDPAPGAATATANANGSSHK

Query:  PQEPTAAE
         ++P A+E
Subjt:  PQEPTAAE

Q9SKU1 Clathrin light chain 12.8e-6851.29Show/hide
Query:  YSMDGEDSYGGYGSYT--------NFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYS-QAPFD-PIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPT
        +S    + +GGY +++        + SGGF      S    PASP+ +GF   SPN+   +PF+  ++  NGNG G G      GD +F SDGPILP P 
Subjt:  YSMDGEDSYGGYGSYT--------NFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYS-QAPFD-PIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPT

Query:  EMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWK
        EM  EEG+  REWRR N I LEEKEK+EKE+R +II EAE++K  FYEKR   +E+ K +NRE+EK               LY  NQEKFHKE DK YWK
Subjt:  EMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWK

Query:  AIAELIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASS
        AIAELIP EVPNIEKKRG KKD +KKPS+ V+QGPKPGKPTDL RMRQI +KLK  PPPHM  PPPPPAKDAKD KDAKDGKDAK  KD   A   K + 
Subjt:  AIAELIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASS

Query:  D------------------PAPGAATATAN----ANGSSHKPQEPTAAE
        D                  PA  A+  TA     A+G   KP   T AE
Subjt:  D------------------PAPGAATATAN----ANGSSHKPQEPTAAE

Arabidopsis top hitse value%identityAlignment
AT2G20760.1 Clathrin light chain protein2.0e-6951.29Show/hide
Query:  YSMDGEDSYGGYGSYT--------NFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYS-QAPFD-PIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPT
        +S    + +GGY +++        + SGGF      S    PASP+ +GF   SPN+   +PF+  ++  NGNG G G      GD +F SDGPILP P 
Subjt:  YSMDGEDSYGGYGSYT--------NFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYS-QAPFD-PIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPT

Query:  EMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWK
        EM  EEG+  REWRR N I LEEKEK+EKE+R +II EAE++K  FYEKR   +E+ K +NRE+EK               LY  NQEKFHKE DK YWK
Subjt:  EMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWK

Query:  AIAELIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASS
        AIAELIP EVPNIEKKRG KKD +KKPS+ V+QGPKPGKPTDL RMRQI +KLK  PPPHM  PPPPPAKDAKD KDAKDGKDAK  KD   A   K + 
Subjt:  AIAELIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASS

Query:  D------------------PAPGAATATAN----ANGSSHKPQEPTAAE
        D                  PA  A+  TA     A+G   KP   T AE
Subjt:  D------------------PAPGAATATAN----ANGSSHKPQEPTAAE

AT2G40060.1 Clathrin light chain protein4.0e-5456.76Show/hide
Query:  YGAAEEEVGDGVFVS----DGPILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSI
        YGA     GDG+F S    DGPILPPP+EM  +EG+ALREWRRQNAI+LEEKEKREKEL  +IIEEA++YK  F++K ++  E+ K  NRE+EK      
Subjt:  YGAAEEEVGDGVFVS----DGPILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSI

Query:  HFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE-KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKD
                 LYLENQEKF+ E+ K YWKAIAEL+P EVP IEK+RGKK+ ++ KKP++ V+QGPKPGKPTDL+RMRQILVKLKH PP H+K    PP+++
Subjt:  HFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE-KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKD

Query:  AKDAKDAKDGKDAKKEKDAAAA
        A  A   K+  + K  +   AA
Subjt:  AKDAKDAKDGKDAKKEKDAAAA

AT3G51890.1 Clathrin light chain protein6.8e-4660Show/hide
Query:  ILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEA
        ILPPP+ M  EEG+ALREWRR NA+ LEEKEK EKE+  +I+E AE+YK  FY KR + +E+ K  NRE+EK                +LENQEKF+ EA
Subjt:  ILPPPTEMGVEEGYALREWRRQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEA

Query:  DKQYWKAIAELIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPA
        DK  WKAIAELIP EVP IE  RG KK   K  +I V+QGPKPGKPTDLSRMRQ+L KLKH PP HMKP  P P+
Subjt:  DKQYWKAIAELIPNEVPNIEKKRGKKKDEEKKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCTTCGACGCCTACAGTATGGACGGTGAAGACAGCTATGGCGGTTACGGATCCTACACCAATTTCTCCGGCGGCTTCCCTGGGGACGCCGATGTAAGCGTTGA
GCACACTCCTGCGTCGCCGGATGTCTTCGGATTCGACGATCCGAGCCCTAACTACTCCCAGGCTCCGTTTGATCCGATTCATATGGAGAATGGAAATGGAAACGGCTATG
GCGCGGCTGAGGAGGAAGTTGGTGATGGTGTTTTCGTATCGGATGGTCCAATTCTTCCGCCTCCCACCGAGATGGGCGTGGAAGAAGGATATGCTCTTCGTGAATGGCGT
CGCCAAAATGCCATTGAACTTGAAGAGAAGGAGAAAAGGGAGAAAGAATTGAGAATCAAAATAATTGAAGAAGCCGAGGAGTATAAAATAGGTTTCTATGAGAAAAGGAA
GCTTAATGTTGAGAGTAAGAAAGTTAACAACAGAGAAAGAGAGAAGCTCTGGTTTCTTAGTATACATTTTTGCATTGCATTTTGGGAGCAGTTATACTTGGAAAACCAGG
AGAAGTTTCATAAAGAGGCTGATAAACAATACTGGAAAGCAATTGCAGAACTAATTCCCAACGAAGTTCCTAATATTGAGAAAAAGAGAGGAAAGAAGAAGGATGAAGAA
AAGAAACCATCTATAATGGTTGTTCAAGGTCCGAAGCCTGGGAAGCCAACCGACCTTTCGAGAATGCGTCAAATTCTCGTAAAATTGAAGCACACACCCCCACCTCATAT
GAAGCCACCCCCTCCCCCACCTGCCAAGGATGCCAAGGATGCCAAAGATGCAAAGGATGGAAAGGATGCCAAAAAAGAAAAGGATGCAGCAGCAGCAGCAGCAACAAAAG
CATCATCTGATCCTGCACCTGGAGCTGCCACTGCCACTGCCAATGCCAATGGCAGTTCTCACAAACCTCAAGAACCAACTGCCGCTGAGGATCAAATTGCCACATAA
mRNA sequenceShow/hide mRNA sequence
CGTCCCCGTGTTTTTCTCATTGACAAACCCAACCCATAAAGGCCATCTCTGCGGTGTTGGAGAGCGCAAAAATGTCCGCCTTCGACGCCTACAGTATGGACGGTGAAGAC
AGCTATGGCGGTTACGGATCCTACACCAATTTCTCCGGCGGCTTCCCTGGGGACGCCGATGTAAGCGTTGAGCACACTCCTGCGTCGCCGGATGTCTTCGGATTCGACGA
TCCGAGCCCTAACTACTCCCAGGCTCCGTTTGATCCGATTCATATGGAGAATGGAAATGGAAACGGCTATGGCGCGGCTGAGGAGGAAGTTGGTGATGGTGTTTTCGTAT
CGGATGGTCCAATTCTTCCGCCTCCCACCGAGATGGGCGTGGAAGAAGGATATGCTCTTCGTGAATGGCGTCGCCAAAATGCCATTGAACTTGAAGAGAAGGAGAAAAGG
GAGAAAGAATTGAGAATCAAAATAATTGAAGAAGCCGAGGAGTATAAAATAGGTTTCTATGAGAAAAGGAAGCTTAATGTTGAGAGTAAGAAAGTTAACAACAGAGAAAG
AGAGAAGCTCTGGTTTCTTAGTATACATTTTTGCATTGCATTTTGGGAGCAGTTATACTTGGAAAACCAGGAGAAGTTTCATAAAGAGGCTGATAAACAATACTGGAAAG
CAATTGCAGAACTAATTCCCAACGAAGTTCCTAATATTGAGAAAAAGAGAGGAAAGAAGAAGGATGAAGAAAAGAAACCATCTATAATGGTTGTTCAAGGTCCGAAGCCT
GGGAAGCCAACCGACCTTTCGAGAATGCGTCAAATTCTCGTAAAATTGAAGCACACACCCCCACCTCATATGAAGCCACCCCCTCCCCCACCTGCCAAGGATGCCAAGGA
TGCCAAAGATGCAAAGGATGGAAAGGATGCCAAAAAAGAAAAGGATGCAGCAGCAGCAGCAGCAACAAAAGCATCATCTGATCCTGCACCTGGAGCTGCCACTGCCACTG
CCAATGCCAATGGCAGTTCTCACAAACCTCAAGAACCAACTGCCGCTGAGGATCAAATTGCCACATAA
Protein sequenceShow/hide protein sequence
MSAFDAYSMDGEDSYGGYGSYTNFSGGFPGDADVSVEHTPASPDVFGFDDPSPNYSQAPFDPIHMENGNGNGYGAAEEEVGDGVFVSDGPILPPPTEMGVEEGYALREWR
RQNAIELEEKEKREKELRIKIIEEAEEYKIGFYEKRKLNVESKKVNNREREKLWFLSIHFCIAFWEQLYLENQEKFHKEADKQYWKAIAELIPNEVPNIEKKRGKKKDEE
KKPSIMVVQGPKPGKPTDLSRMRQILVKLKHTPPPHMKPPPPPPAKDAKDAKDAKDGKDAKKEKDAAAAAATKASSDPAPGAATATANANGSSHKPQEPTAAEDQIAT