; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G005140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G005140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCHCH domain-containing protein
Genome locationCmo_Chr03:5357735..5358540
RNA-Seq ExpressionCmoCh03G005140
SyntenyCmoCh03G005140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134733.1 uncharacterized protein LOC101211873 [Cucumis sativus]6.5e-5178.23Show/hide
Query:  MISLKPSPHHNG--SSFLSNSSNLHQKLSPITR-HRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF  NSS   Q   PI R  + NF     TKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSPHHNG--SSFLSNSSNLHQKLSPITR-HRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]5.4e-74100Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]6.6e-7297.92Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSPHHNGSSFLSNSSNLHQKL+PITR RSNFPPP RTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]1.7e-7297.92Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSPHHNGSSFL NSSNLHQKLSPITRHRSNFPPP RTKTTF+IRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]4.6e-5784.35Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSP-ITRHRSNFPPPLRTK-TTFRIRAEQA-ESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISL PS HHNGSSF  NSSNL Q   P I R + NF PP  TK TTFR +AEQA  SGNGAQRRTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLL+
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSP-ITRHRSNFPPPLRTK-TTFRIRAEQA-ESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein3.1e-5178.23Show/hide
Query:  MISLKPSPHHNG--SSFLSNSSNLHQKLSPITR-HRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF  NSS   Q   PI R  + NF     TKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSPHHNG--SSFLSNSSNLHQKLSPITR-HRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A5C7GRM7 Uncharacterized protein8.0e-3964.38Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESG--NGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKV
        MISLKP       SFLSN+++  QKL  IT+ ++NFP        F +RA   + G     ++R+FLTLEEAGLVE+SGL+THERFLCRLTISSLNLL+V
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESG--NGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKV

Query:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        I+E+E CSIEELNAGR+CDWFLKDKLKREQN+DSAVLQWDDS+  F
Subjt:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1CKG5 uncharacterized protein LOC1110124325.2e-4675.16Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRT------KTTFR---IRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSF   SSNL   L PI    SNF  PL T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRT------KTTFR---IRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        SLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1GCY7 uncharacterized protein LOC1114530372.6e-74100Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1ISV2 uncharacterized protein LOC1114781113.2e-7297.92Show/hide
Query:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSPHHNGSSFLSNSSNLHQKL+PITR RSNFPPP RTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein1.2e-3472.53Show/hide
Query:  EQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        E+++  N  +RR+FL+L EAGLVE+SGL  HE+FLCRLTISSLNLL+VI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D
Subjt:  EQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCACTCAAACCCTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTGAGTCCAATCACTAGACATCGGTCCAATTTCCC
TCCTCCATTACGCACCAAAACGACCTTCAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACGCTCGAAGAGGCCGGCCTCGTCG
AAGTATCCGGCCTCAGCACGCACGAACGATTTCTGTGCCGTTTAACCATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTG
AATGCGGGGAGATTATGCGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
TGTCCACCACATAAAAGTGCGAGCCCTACCAATAAAACCGATAAGCCTCGCCGTCATCTTCCTTCAATCATCTCCCGCAACAATTAACCAGAAATGATCTCACTCAAACC
CTCCCCTCACCACAACGGATCCTCATTTCTCTCCAATTCTTCAAATCTTCATCAAAAACTGAGTCCAATCACTAGACATCGGTCCAATTTCCCTCCTCCATTACGCACCA
AAACGACCTTCAGAATCCGCGCCGAACAGGCCGAATCAGGCAACGGCGCTCAAAGACGAACATTCTTGACGCTCGAAGAGGCCGGCCTCGTCGAAGTATCCGGCCTCAGC
ACGCACGAACGATTTCTGTGCCGTTTAACCATCTCGTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGTTCTATCGAAGAGTTGAATGCGGGGAGATTATG
CGACTGGTTTCTCAAGGATAAGCTGAAAAGAGAGCAGAATTTGGACTCTGCCGTTCTTCAATGGGACGATTCCGACCCTCTCTTCTGAGGTTTTCCTCTCCCTCCTCCTG
TCCGAGCTTTACTTCTCAGATACATGAATTTCTATTTCCTTACCTGTTAACTTATTAATTTAATTGTTATTTTAACATTTTCACTTCATAATTCAAAAGTTTATGATTTT
TAAAAATATAACGTTGGTGTTTAAATCTTAATTAAATCCTCGTTTGTATTATGTACCCTAG
Protein sequenceShow/hide protein sequence
MISLKPSPHHNGSSFLSNSSNLHQKLSPITRHRSNFPPPLRTKTTFRIRAEQAESGNGAQRRTFLTLEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEEL
NAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF