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CmoCh03G005230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G005230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionB-box type zinc finger family protein
Genome locationCmo_Chr03:5395920..5396309
RNA-Seq ExpressionCmoCh03G005230
SyntenyCmoCh03G005230
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603735.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6798.45Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGP+LVATVAFCQ+CVEKNRRNGKTAQRRGRRRVGEEEGRGS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS
        SNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS

TYK13089.1 putative zinc finger protein [Cucumis melo var. makuwa]2.9e-4271.43Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELC CVATV+CE+D A LCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGP LVATVAFC NCV K R N       GRR    E+  GS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSG-------GGSDSDDEKENQVVPWLSLS
        SNGG+           D DDE ENQVVPWLSLS
Subjt:  SNGGSG-------GGSDSDDEKENQVVPWLSLS

XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]1.8e-68100Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS
        SNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS

XP_022977340.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]1.7e-6696.9Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELCDCVATVICESD+ARLCWGCDSKVHGANFLVGKH RVLLCHDCQAPTPWNGSGP+LVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS
        SNGGSGGGSDSDDEKE+QVVPWLSLSSRS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS

XP_023544021.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]6.4e-6696.9Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGP+LVATVAFCQNCVEKNRR+GKTAQRR RRRVGEEEGRGS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS
        SNGG GGGSDSDDEKENQVVPWLSLSSRS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS

TrEMBL top hitse value%identityAlignment
A0A0A0KHH6 B box-type domain-containing protein1.9e-4473.81Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELC CVATV+CESD A LCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGP LVATVAFC NCV KNRRN     RR  +  G  +G G+
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLS
        +     G  D DDE ENQVVPWLSLS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLS

A0A5A7UBH5 Putative zinc finger protein1.8e-4270.9Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELC CVATV+CE+D A LCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGP LVATVAFC NCV K R N       GRR    E+  GS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSG--------GGSDSDDEKENQVVPWLSLS
        SNGG+            D DDE ENQVVPWLSLS
Subjt:  SNGGSG--------GGSDSDDEKENQVVPWLSLS

A0A5D3CS61 Putative zinc finger protein1.4e-4271.43Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELC CVATV+CE+D A LCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGP LVATVAFC NCV K R N       GRR    E+  GS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSG-------GGSDSDDEKENQVVPWLSLS
        SNGG+           D DDE ENQVVPWLSLS
Subjt:  SNGGSG-------GGSDSDDEKENQVVPWLSLS

A0A6J1GEL4 putative zinc finger protein At1g681908.7e-69100Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS
        SNGGSGGGSDSDDEKENQVVPWLSLSSRS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS

A0A6J1IM17 zinc finger protein CONSTANS-LIKE 13-like8.1e-6796.9Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
        MKKLCELCDCVATVICESD+ARLCWGCDSKVHGANFLVGKH RVLLCHDCQAPTPWNGSGP+LVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGS

Query:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS
        SNGGSGGGSDSDDEKE+QVVPWLSLSSRS
Subjt:  SNGGSGGGSDSDDEKENQVVPWLSLSSRS

SwissProt top hitse value%identityAlignment
Q1G3I2 B-box domain protein 308.2e-0854Show/hide
Query:  CELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELC   ATV CE+D A LC  CD  VH ANFL  +HLR ++C  C+  T
Subjt:  CELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

Q9C9F4 Putative zinc finger protein At1g681901.3e-0836.96Show/hide
Query:  MKKLCELCDCV-ATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVA----TVAFCQNCVEKNRRNGKTAQRR
        M+++CE C    A V C +D A LC  CD+KVH AN L G+HLR +LC  C+       + P +V      +  C  C +K    G +  RR
Subjt:  MKKLCELCDCV-ATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVA----TVAFCQNCVEKNRRNGKTAQRR

Q9LJB7 B-box zinc finger protein 321.3e-0842.86Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKL
        M   CELC   A + C +D A LC  CD+K H +NFL  +H R ++C +C++ T    SGP L
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKL

Q9LRM4 B-box domain protein 311.1e-0958Show/hide
Query:  CELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELCD  A+V CE+D A LC  CD  VHGANFL  +H+R +LC  CQ  T
Subjt:  CELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

Q9SYM2 B-box zinc finger protein 226.3e-0855.32Show/hide
Query:  MKKLCELCDCV-ATVICESDQARLCWGCDSKVHGANFLVGKHLRVLL
        MK  C +C+   ATV+C +D+A LCW CD K+H AN L GKH RV L
Subjt:  MKKLCELCDCV-ATVICESDQARLCWGCDSKVHGANFLVGKHLRVLL

Arabidopsis top hitse value%identityAlignment
AT1G68190.1 B-box zinc finger family protein9.0e-1036.96Show/hide
Query:  MKKLCELCDCV-ATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVA----TVAFCQNCVEKNRRNGKTAQRR
        M+++CE C    A V C +D A LC  CD+KVH AN L G+HLR +LC  C+       + P +V      +  C  C +K    G +  RR
Subjt:  MKKLCELCDCV-ATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVA----TVAFCQNCVEKNRRNGKTAQRR

AT3G21150.1 B-box 329.0e-1042.86Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKL
        M   CELC   A + C +D A LC  CD+K H +NFL  +H R ++C +C++ T    SGP L
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKL

AT3G21890.1 B-box type zinc finger family protein8.1e-1158Show/hide
Query:  CELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT
        CELCD  A+V CE+D A LC  CD  VHGANFL  +H+R +LC  CQ  T
Subjt:  CELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPT

AT4G27310.1 B-box type zinc finger family protein2.4e-2342.31Show/hide
Query:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVE-KN----RRNGKTAQRRGRRRVG--
        M K C+LC+ VA + CESDQA LCW CD KVHGANFLV KH R LLC  CQ+ TPW  +G +L  T + C++CV  KN    R N   ++ RG+  V   
Subjt:  MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVE-KN----RRNGKTAQRRGRRRVG--

Query:  -EEEGRGSSNGGSGGGSDS--------------------------DDEKENQVVPW
          EE R   + G G  ++S                          D+E ENQVVPW
Subjt:  -EEEGRGSSNGGSGGGSDS--------------------------DDEKENQVVPW

AT5G54470.1 B-box type zinc finger family protein1.8e-2649.6Show/hide
Query:  KKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGSS
        KK CELC  VA + CESDQA LCW CD KVHGANFLV KH+R LLC  CQ+ TPW  SG  L  TV+ C++C+ + + N  +   R +    EEE  G +
Subjt:  KKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGSS

Query:  NGGSGGGSDSD-----DEKENQVVP
        +G      +SD     +E ENQVVP
Subjt:  NGGSGGGSDSD-----DEKENQVVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATTGTGCGAGCTGTGCGACTGTGTGGCGACTGTGATATGCGAATCGGACCAGGCGAGGTTGTGTTGGGGGTGCGATTCCAAGGTCCATGGCGCCAAT
TTTCTGGTGGGGAAACACTTGAGGGTTTTGCTCTGCCATGATTGTCAAGCCCCCACGCCTTGGAATGGGTCTGGACCAAAGCTTGTGGCCACAGTTGCGTTTTGT
CAGAACTGTGTCGAGAAAAACAGGCGAAACGGGAAGACGGCGCAGCGGAGAGGAAGAAGGCGAGTGGGTGAAGAGGAAGGACGTGGGAGCTCTAATGGCGGCTCT
GGCGGTGGCAGTGACAGTGACGATGAGAAGGAAAATCAAGTGGTTCCTTGGTTATCACTTTCCTCTCGCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATTGTGCGAGCTGTGCGACTGTGTGGCGACTGTGATATGCGAATCGGACCAGGCGAGGTTGTGTTGGGGGTGCGATTCCAAGGTCCATGGCGCCAAT
TTTCTGGTGGGGAAACACTTGAGGGTTTTGCTCTGCCATGATTGTCAAGCCCCCACGCCTTGGAATGGGTCTGGACCAAAGCTTGTGGCCACAGTTGCGTTTTGT
CAGAACTGTGTCGAGAAAAACAGGCGAAACGGGAAGACGGCGCAGCGGAGAGGAAGAAGGCGAGTGGGTGAAGAGGAAGGACGTGGGAGCTCTAATGGCGGCTCT
GGCGGTGGCAGTGACAGTGACGATGAGAAGGAAAATCAAGTGGTTCCTTGGTTATCACTTTCCTCTCGCTCTTAG
Protein sequenceShow/hide protein sequence
MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSGPKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGS
GGGSDSDDEKENQVVPWLSLSSRS