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CmoCh03G005560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G005560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr03:5520346..5521031
RNA-Seq ExpressionCmoCh03G005560
SyntenyCmoCh03G005560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603772.1 hypothetical protein SDJN03_04381, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2897.18Show/hide
Query:  MIADKEKRPVEIEDAEEANVCKLERRTGAWSEEILRTIPQRKRSAESGRKSLERKVGETKQNSYSPFCVFT
        MIADKEKRPVEIEDAEEANVCKLERRTGAWSEEILRTIPQRKRSAESGRKSLE+KVGETKQNS SPFCVFT
Subjt:  MIADKEKRPVEIEDAEEANVCKLERRTGAWSEEILRTIPQRKRSAESGRKSLERKVGETKQNSYSPFCVFT
KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]2.6e-0583.87Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERADSMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]7.4e-0580.65Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERA+SMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]1.3e-0480.65Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERADSMGK S
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]2.6e-0583.87Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERADSMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
TrEMBL top hitse value%identityAlignment
A0A0A0KJX3 Uncharacterized protein1.2e-0583.87Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERADSMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
A0A1S3B0N9 uncharacterized protein LOC1034846041.0e-0480.65Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEII R+ QF+INK+LERADSMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
A0A5D3CMA4 Uncharacterized protein1.0e-0480.65Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEII R+ QF+INK+LERADSMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
A0A6J1CLW2 uncharacterized protein LOC1110124783.6e-0580.65Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERA+SMGKPS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
A0A6J1KP23 uncharacterized protein LOC1114974086.1e-0580.65Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
        +KEDPEEIIHR+ QF+INK+LERADSMGK S
Subjt:  EKEDPEEIIHRKPQFVINKLLERADSMGKPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04745.1 unknown protein3.6e-0573.08Show/hide
Query:  EKEDPEEIIHRKPQFVINKLLERADS
        EKEDP+E+IHR+ QF+I K+LERADS
Subjt:  EKEDPEEIIHRKPQFVINKLLERADS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCCGATAAAGAAAAACGTCCGGTGGAGATCGAAGACGCAGAAGAGGCTAATGTTTGCAAGCTTGAAAGAAGAACCGGAGCTTGGAGCGAAGAGATTCTCCGCAC
AATCCCACAGAGAAAGAGATCCGCAGAATCGGGAAGGAAAAGTTTGGAGAGGAAAGTCGGCGAAACAAAACAAAACAGCTATTCCCCGTTCTGCGTTTTTACGGACAGTC
TAGATCCAGCGACATTTGGTCTCATCCATGCATTTGAGAAAGAAGATCCAGAGGAGATAATTCATCGGAAACCGCAGTTTGTAATCAACAAATTGTTAGAACGTGCAGAT
TCCATGGGGAAACCTTCGTGT
mRNA sequenceShow/hide mRNA sequence
ATGATCGCCGATAAAGAAAAACGTCCGGTGGAGATCGAAGACGCAGAAGAGGCTAATGTTTGCAAGCTTGAAAGAAGAACCGGAGCTTGGAGCGAAGAGATTCTCCGCAC
AATCCCACAGAGAAAGAGATCCGCAGAATCGGGAAGGAAAAGTTTGGAGAGGAAAGTCGGCGAAACAAAACAAAACAGCTATTCCCCGTTCTGCGTTTTTACGGACAGTC
TAGATCCAGCGACATTTGGTCTCATCCATGCATTTGAGAAAGAAGATCCAGAGGAGATAATTCATCGGAAACCGCAGTTTGTAATCAACAAATTGTTAGAACGTGCAGAT
TCCATGGGGAAACCTTCGTGT
Protein sequenceShow/hide protein sequence
MIADKEKRPVEIEDAEEANVCKLERRTGAWSEEILRTIPQRKRSAESGRKSLERKVGETKQNSYSPFCVFTDSLDPATFGLIHAFEKEDPEEIIHRKPQFVINKLLERAD
SMGKPSC