; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G006140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G006140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr03:5753702..5754106
RNA-Seq ExpressionCmoCh03G006140
SyntenyCmoCh03G006140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025575.1 hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa]2.9e-3764.29Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA------SGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILR
        MGNCINT HF PLQK+K  ICCE E L L LPI  +A      S A+TTS+AV EV    PPLPV I  D ++ KP    KLPK  TIVVSKQQLELILR
Subjt:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA------SGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILR

Query:  NSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
         S+ F SKGIAVQFSD F+ DD CPRW PALPTI EV NY
Subjt:  NSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

KAE8647639.1 hypothetical protein Csa_004428 [Cucumis sativus]4.8e-4070.37Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA---SGAYTTSNAV--LEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRN
        MGNCINT HF PLQK+K  ICCE EDL+LALPIE IA   + A+TTS+AV   EV+ G PPLPV I  D ++ KP  LCKLPK TTIVVSKQQLELILR 
Subjt:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA---SGAYTTSNAV--LEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRN

Query:  SRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILE
        S+ F SKGIAVQFSDSF+ DD CPRW PALPTI E
Subjt:  SRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILE

KAF9851460.1 hypothetical protein H0E87_015599 [Populus deltoides]7.4e-0933.54Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDD----------DAVSKPDALCKL-------------
        MGNCI+   +   ++ K LI   GE +   +  ++KI SG Y      + V    P +P+  D             ++ +P   C+L             
Subjt:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDD----------DAVSKPDALCKL-------------

Query:  PKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
         +   IVV++QQLEL+LRNS++F SKGIAV+FS+SF+  +R  +W P+L TI EV  +
Subjt:  PKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

KAG6594706.1 hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3158.82Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAYTTSNAVLEVDRGA--PPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRK
        MGNCI++ H                   LA+P+EKIA    T  +AVLEV RGA  PP  V IDDDD ++KP ALCKLPK  TIVVSK+QLE +L NS++
Subjt:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAYTTSNAVLEVDRGA--PPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRK

Query:  FASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
        F S+GIAVQFSDSF+FD  C RWCP LPTILEVHNY
Subjt:  FASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

KAG6603830.1 hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6998.51Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFA
        MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAYTTS+AVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFA
Subjt:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFA

Query:  SKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
        SKGIAVQFSDSFE DDRCPRWCPALPTILEVHNY
Subjt:  SKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

TrEMBL top hitse value%identityAlignment
A0A0A0KHP3 Uncharacterized protein1.9e-4270.5Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA---SGAYTTSNAV--LEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRN
        MGNCINT HF PLQK+K  ICCE EDL+LALPIE IA   + A+TTS+AV   EV+ G PPLPV I  D ++ KP  LCKLPK TTIVVSKQQLELILR 
Subjt:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA---SGAYTTSNAV--LEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRN

Query:  SRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
        S+ F SKGIAVQFSDSF+ DD CPRW PALPTI EV NY
Subjt:  SRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

A0A5D3CLY8 Uncharacterized protein1.4e-3764.29Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA------SGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILR
        MGNCINT HF PLQK+K  ICCE E L L LPI  +A      S A+TTS+AV EV    PPLPV I  D ++ KP    KLPK  TIVVSKQQLELILR
Subjt:  MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA------SGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILR

Query:  NSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
         S+ F SKGIAVQFSD F+ DD CPRW PALPTI EV NY
Subjt:  NSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

A0A5N5M953 Uncharacterized protein5.2e-0835.53Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDD-------------DAVSKPDALCKLP-------KT
        MGNCI+       ++ K LI   GE +   + P++KI SG Y      + V+R  P  P+  D               D  S+ +   KL        + 
Subjt:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDD-------------DAVSKPDALCKLP-------KT

Query:  TTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEV
          IVV++QQLEL+LRNS++   +GIAVQFS+SF+   R  +W P+L TI EV
Subjt:  TTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEV

A0A6A1W907 Uncharacterized protein8.9e-0832.28Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKL-----------------------
        MGNC +       +K++ L+  EGE + S   P+EKI  G Y+    V      +P LP      DA  +P  L  L                       
Subjt:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKL-----------------------

Query:  PKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
         K   IVV+K QLEL+LR++ KF SK IA+    SF+  +   +W P+L  I EVH++
Subjt:  PKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

B9HD50 Uncharacterized protein4.7e-0933.54Show/hide
Query:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDD----------DAVSKPDALCKL-------------
        MGNCI+   +   ++ K LI   GE +   +  ++KI SG Y      + V    P +P+  D             ++ +P   C+L             
Subjt:  MGNCINTAHFRPLQKLKDLICCEGE-DLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDD----------DAVSKPDALCKL-------------

Query:  PKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY
         +   IVV++QQLEL+LRNS++F SKGIAV+FS+SF+  +R  +W P+L TI EV  +
Subjt:  PKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEFDDRCPRWCPALPTILEVHNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTGCATCAACACAGCCCATTTCCGACCTCTGCAAAAGTTGAAAGATTTGATATGCTGTGAAGGAGAAGATTTAAGCTTGGCATTGCCCATTGAAAAGATAGC
TTCTGGAGCTTATACAACTTCAAATGCTGTGCTAGAAGTTGACCGTGGGGCTCCTCCTCTGCCTGTTAGTATTGATGATGATGATGCTGTTAGCAAGCCTGATGCATTGT
GCAAACTCCCCAAGACCACCACCATTGTGGTTAGCAAACAACAGCTCGAGTTGATCCTAAGAAACTCCAGAAAGTTTGCCTCTAAAGGTATTGCTGTTCAATTCTCTGAT
AGTTTTGAGTTCGACGATCGATGCCCCAGATGGTGCCCCGCCTTGCCTACAATTCTCGAGGTACATAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTGCATCAACACAGCCCATTTCCGACCTCTGCAAAAGTTGAAAGATTTGATATGCTGTGAAGGAGAAGATTTAAGCTTGGCATTGCCCATTGAAAAGATAGC
TTCTGGAGCTTATACAACTTCAAATGCTGTGCTAGAAGTTGACCGTGGGGCTCCTCCTCTGCCTGTTAGTATTGATGATGATGATGCTGTTAGCAAGCCTGATGCATTGT
GCAAACTCCCCAAGACCACCACCATTGTGGTTAGCAAACAACAGCTCGAGTTGATCCTAAGAAACTCCAGAAAGTTTGCCTCTAAAGGTATTGCTGTTCAATTCTCTGAT
AGTTTTGAGTTCGACGATCGATGCCCCAGATGGTGCCCCGCCTTGCCTACAATTCTCGAGGTACATAATTACTAG
Protein sequenceShow/hide protein sequence
MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAYTTSNAVLEVDRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFASKGIAVQFSD
SFEFDDRCPRWCPALPTILEVHNY