CuGenDBv2

Gene ID	CmoCh03G006430
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Thioredoxin reductase
Genome location	Cmo_Chr03:5866618..5867797
RNA-Seq Expression	CmoCh03G006430
Synteny	CmoCh03G006430
Gene Ontology terms	GO:0019430 - removal of superoxide radicals (biological process) GO:0005737 - cytoplasm (cellular component) GO:0004791 - thioredoxin-disulfide reductase activity (molecular function)
InterPro domains	IPR036188 - FAD/NAD(P)-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025601.1 trafficking protein particle complex subunit 11 [Cucumis melo var. makuwa]

2.1e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

KAG6594725.1 Thioredoxin reductase 2, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

TYK12476.1 trafficking protein particle complex subunit 11 [Cucumis melo var. makuwa]

2.1e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

XP_008440935.1 PREDICTED: thioredoxin reductase NTRB-like [Cucumis melo]

2.1e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

XP_011658090.1 thioredoxin reductase NTRB [Cucumis sativus]

2.1e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH29 Thioredoxin reductase

1.0e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

A0A1S3B2A6 Thioredoxin reductase

1.0e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

A0A5A7SMY3 Thioredoxin reductase

1.0e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

A0A5D3CPX4 Thioredoxin reductase

1.0e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

A0A6J1KSS2 Thioredoxin reductase

1.3e-16

69.44

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS
        PA HTAAIYAARAEL PI FEGWMAN+IAPG QL+ TTEVENFPGFSN V       +CRNQSL     IF+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSLPVPELIFS

SwissProt top hits

e value

%identity

Alignment

P51978 Thioredoxin reductase

3.2e-12

71.74

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF
        PA HTAAIY ARAEL P+ +EG+MAN IA G QL+ TTE+ENFPGF
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF

Q39242 Thioredoxin reductase 2

1.2e-14

78.26

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF
        PA HTAAIYA+RAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF

Q39243 Thioredoxin reductase 1, mitochondrial

5.3e-15

80.43

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF
        PA HTAAIYAARAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF

Q69PS6 Thioredoxin reductase NTRA

2.9e-13

57.81

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSL
        PA HTAA+YAARAEL P+ FEG++AN+IA G QL+ TT+VENFPGF + +       +CR QS+
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSL

Q6ZFU6 Thioredoxin reductase NTRB

2.0e-14

60.94

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSL
        P+ HTAAIYAARAEL P+ FEGW+AN+IA G QL+ TT+VENFPGF   +       +CR QSL
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGFSNVV-------QCRNQSL

Arabidopsis top hits

e value

%identity

Alignment

AT2G17420.1 NADPH-dependent thioredoxin reductase A

8.4e-16

78.26

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF
        PA HTAAIYA+RAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF

AT2G41680.1 NADPH-dependent thioredoxin reductase C

1.2e-09

65.22

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF
        PA +TAAIYAARA L P+ FEG+    + PG QL  TTEVENFPGF
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF

AT4G35460.1 NADPH-dependent thioredoxin reductase B

3.8e-16

80.43

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Query:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF
        PA HTAAIYAARAEL P+ FEGWMAN+IAPG QL+ TT+VENFPGF
Subjt:  PAVHTAAIYAARAELWPIFFEGWMANNIAPGRQLSITTEVENFPGF

Sequences

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CDS sequence

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ATGAATGAAAACATGAATAGATTCTTAGGAGCTGCCGATGGATATAGGAAAAAATGTTCTTTAACCATTATAGGTTGGAAAGAAGCTCTTCGATTTTCTCGGAGG
AGCTCGAAATTAAATCGGCGTAGCATCCATCACAGTTGCGGCGGCGTTTCATTCTTCCAGTCCTGCGAGTTCCGGTTCCAAAATCGCGGCCATGGACGATCTTGG
TCTGCATCATCGTTAAGAAGCCCAGCCGTCCACACCGCCGCTATATACGCCGCTCGGGCGGAGCTGTGGCCGATCTTCTTCGAAGGATGGATGGCCAACAACATT
GCGCCGGGCAGACAGCTCTCCATCACTACCGAGGTCGAGAATTTCCCCGGCTTCTCGAATGTCGTCCAGTGCCGCAATCAATCTCTCCCCGTTCCGGAACTCATT
TTCTCGCCGATCGATTCGATTTCGCAGTCGACTCTCCAGCCACTTGATAATGGAGGTGGCGCCGCCGCCGCCGATCCGGTCGGAAAGAGTGAAAGAGGAGAGAAG
GCGAGTCGGTTTAAAGCAGGAAAGACTCCACCTGTGAGGCTGATTTCCCTCGTCGGATGCCCCGACCTTCACCCCACCATTCTCCTCTCACCTTCTCTCCGATCC
ACACTCTTGCCTTCTCCGACCTCTCCAAGATCATAA

mRNA sequence

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Protein sequence

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MNENMNRFLGAADGYRKKCSLTIIGWKEALRFSRRSSKLNRRSIHHSCGGVSFFQSCEFRFQNRGHGRSWSASSLRSPAVHTAAIYAARAELWPIFFEGWMANNI
APGRQLSITTEVENFPGFSNVVQCRNQSLPVPELIFSPIDSISQSTLQPLDNGGGAAAADPVGKSERGEKASRFKAGKTPPVRLISLVGCPDLHPTILLSPSLRS
TLLPSPTSPRS

CmoCh03G006430 (gene) of Cucurbita moschata (Rifu) v1 genome