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CmoCh03G006580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G006580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChitin-binding type-1 domain-containing protein
Genome locationCmo_Chr03:5931087..5931648
RNA-Seq ExpressionCmoCh03G006580
SyntenyCmoCh03G006580
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0009057 - macromolecule catabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0008061 - chitin binding (molecular function)
InterPro domainsIPR036861 - Endochitinase-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQI71907.1 hypothetical protein [Escherichia coli]4.9e-0650.98Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
        Q+GWCG TD Y GAGCQ+QC+ GG      P  GGGD+G L+++++ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
MQK21425.1 hypothetical protein [Escherichia coli]7.5e-0752.94Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
        Q+GWCG TDLY GAGCQ+QC+ GG      P  GGGD+G L+++++ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
MQL05365.1 hypothetical protein [Escherichia coli]4.9e-0650.98Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
        Q+GWCG TD Y GAGCQ+QC+ GG      P  GGGD+G L+++++ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
MQL41228.1 hypothetical protein [Escherichia coli]4.9e-0650.98Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
        Q+GWCG TD Y GAGCQ+QC+ GG      P  GGGD+G L+++++ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
WP_205008365.1 hypothetical protein, partial [Escherichia coli]4.9e-0650.98Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
        Q+GWCG TD Y GAGCQ+QC+ GG      P  GGGD+G L+++++ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
TrEMBL top hitse value%identityAlignment
A0A5N5M139 Chitin-binding type-1 domain-containing protein1.5e-0552.73Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
        Q+GWCG+TD Y GAGCQ+QC  GG  P        P GGGDVG++I  A+ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
A0A6N2L6D7 Chitin-binding type-1 domain-containing protein1.5e-0552.73Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
        Q+GWCG+TD Y GAGCQ+QC  GG  P        P GGGDVG++I  A+ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
A0A6N2M422 Chitin-binding type-1 domain-containing protein1.5e-0552.73Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
        Q+GWCG+TD Y GAGCQ+QC  GG  P        P GGGDVG++I  A+ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
A0A6N2MJR7 Chitin-binding type-1 domain-containing protein1.5e-0552.73Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
        Q+GWCG+TD Y GAGCQ+QC  GG  P        P GGGDVG++I  A+ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGLAP--------PRGGGDVGTLIATAISDKVL
V5TEI0 Chitinase B1.5e-0551.06Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGLAPPRGGGDVGTLIATAISDKVL
        QYGWCG T  Y GAGCQ+QC       P GGGDVG+++   I +++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGLAPPRGGGDVGTLIATAISDKVL
SwissProt top hitse value%identityAlignment
P24626 Chitinase 32.3e-0650.94Show/hide
Query:  QYGWCGATDLYGGAGCQNQCR---SGGLAPPRGGGDVGTLIATAISDKVLSQM
        QYGWCG+T  Y GAGCQ+QC     GG  PP  GG  G+ +A+ IS  +  QM
Subjt:  QYGWCGATDLYGGAGCQNQCR---SGGLAPPRGGGDVGTLIATAISDKVLSQM
P25765 Chitinase 121.5e-0545.45Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRS-----GGLAPPRGGGDVGTLIATAISDKVLSQM
        Q+GWCG+T  Y GAGCQ+QC +     GG  PP G G  G+ +A+ +S  +  QM
Subjt:  QYGWCGATDLYGGAGCQNQCRS-----GGLAPPRGGGDVGTLIATAISDKVLSQM
P36907 Endochitinase8.6e-0645.1Show/hide
Query:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
        ++G+CG+TD Y G GCQ+QC+S        P  GGGDVG L+ +++ D++L
Subjt:  QYGWCGATDLYGGAGCQNQCRSGGL----APPRGGGDVGTLIATAISDKVL
Q06209 Basic endochitinase CHB41.3e-0646.3Show/hide
Query:  QYGWCGATDLYGGAGCQN-QCRS-GGLAPPRGGGDVGTLIATAISDKVLSQMGG
        Q+G+CG+TD Y G GC++  CRS GG   P GGG VG+++  A  + +++Q GG
Subjt:  QYGWCGATDLYGGAGCQN-QCRS-GGLAPPRGGGDVGTLIATAISDKVLSQMGG
Q42993 Chitinase 11.0e-0648.15Show/hide
Query:  QYGWCGATDLYGGAGCQNQCR----SGGLAPPRGGGDVGTLIATAISDKVLSQM
        QYGWCG+T  Y G+GCQ+QC      GG  PP GGG  G+ +A+ +S  +  QM
Subjt:  QYGWCGATDLYGGAGCQNQCR----SGGLAPPRGGGDVGTLIATAISDKVLSQM
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGACGTGCCGTCCTTTGTTTCAAAAATCCGTTCAATATGGGTGGTGCGGCGCCACTGATCTCTACGGTGGAGCTGGTTGTCAAAACCAGTGTCGTTCCGGTGG
TTTAGCCCCTCCGAGAGGCGGAGGGGACGTTGGCACGCTCATCGCCACCGCCATTTCCGATAAGGTCTTATCTCAAATGGGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGACGTGCCGTCCTTTGTTTCAAAAATCCGTTCAATATGGGTGGTGCGGCGCCACTGATCTCTACGGTGGAGCTGGTTGTCAAAACCAGTGTCGTTCCGGTGG
TTTAGCCCCTCCGAGAGGCGGAGGGGACGTTGGCACGCTCATCGCCACCGCCATTTCCGATAAGGTCTTATCTCAAATGGGTGGTTGA
Protein sequenceShow/hide protein sequence
MVETCRPLFQKSVQYGWCGATDLYGGAGCQNQCRSGGLAPPRGGGDVGTLIATAISDKVLSQMGG