; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G007940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G007940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr03:6491587..6492671
RNA-Seq ExpressionCmoCh03G007940
SyntenyCmoCh03G007940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY67996.1 hypothetical protein CUMW_260690 [Citrus unshiu]1.9e-0669.39Show/hide
Query:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
        LL  PLGSN++ RTACCSVG+ LPV   SRQ R KIKMSN SG CIGQ+
Subjt:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
KAG6603991.1 hypothetical protein SDJN03_04600, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2685.53Show/hide
Query:  MLLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQ--VGKKKSFQVGLVFFGAWENAKERTIL
        MLLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQ      +  +VGLVFFGAWEN KERTIL
Subjt:  MLLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQ--VGKKKSFQVGLVFFGAWENAKERTIL
XP_015389328.1 uncharacterized protein LOC102617006 isoform X1 [Citrus sinensis]2.8e-0567.35Show/hide
Query:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
        LL  PLGSN++ RTAC SVG+ LPV   SRQ R KIKMSN SG CIGQ+
Subjt:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
XP_015389414.1 uncharacterized protein LOC102617006 isoform X4 [Citrus sinensis]2.8e-0567.35Show/hide
Query:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
        LL  PLGSN++ RTAC SVG+ LPV   SRQ R KIKMSN SG CIGQ+
Subjt:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
XP_023543983.1 uncharacterized protein LOC111803691 isoform X1 [Cucurbita pepo subsp. pepo]5.7e-1994.44Show/hide
Query:  LLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQVGKKKSF
        LLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIK+SNRSGFCIGQVGKK  F
Subjt:  LLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQVGKKKSF
TrEMBL top hitse value%identityAlignment
A0A2H5QTP6 Uncharacterized protein9.2e-0769.39Show/hide
Query:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
        LL  PLGSN++ RTACCSVG+ LPV   SRQ R KIKMSN SG CIGQ+
Subjt:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQV
V4SK87 Uncharacterized protein2.3e-0568.75Show/hide
Query:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQ
        LL  PLGSN++ RTAC SVG+ LPV   SRQ R KIKMSN SG CIGQ
Subjt:  LLLYPLGSNVV-RTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTTCTATATCCTCTTGGTTCCAATGTTGTTCGTACGGCATGTTGCTCTGTAGGGATTGTCTTACCTGTGAATTCCCCTTCAAGGCAATCGAGAAGAAAG
ATCAAAATGAGCAATAGAAGTGGCTTTTGTATTGGGCAGGTTGGGAAAAAAAAATCTTTTCAGGTTGGCCTAGTTTTCTTTGGGGCATGGGAAAATGCAAAGGAA
CGTACAATTTTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCAGTCGCATCGAAACCTTTTTCTTTGGATTTTGAGATCTTCGTTCTTGAATCTCTCATTCATTTCGATGAAGATTTAAGCAGCGATTTTGCTTCCAATCGA
TCAATGGCTCTTCTCGGCTTCGCAGTCACCAACGAGGTTAGGGATAAAAGTTTGAGTGATTCGCTGCAAACAATGTTAGAAGGATATGACGAGAACTCGAATTTG
GGGAGGCTATGATATTTGGGATCCTTTATGCTGCTTCTATATCCTCTTGGTTCCAATGTTGTTCGTACGGCATGTTGCTCTGTAGGGATTGTCTTACCTGTGAAT
TCCCCTTCAAGGCAATCGAGAAGAAAGATCAAAATGAGCAATAGAAGTGGCTTTTGTATTGGGCAGGTTGGGAAAAAAAAATCTTTTCAGGTTGGCCTAGTTTTC
TTTGGGGCATGGGAAAATGCAAAGGAACGTACAATTTTGTGA
Protein sequenceShow/hide protein sequence
MLLLYPLGSNVVRTACCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQVGKKKSFQVGLVFFGAWENAKERTIL