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CmoCh03G009380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G009380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGrowth-regulating factor
Genome locationCmo_Chr03:7105934..7106320
RNA-Seq ExpressionCmoCh03G009380
SyntenyCmoCh03G009380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036397.1 hypothetical protein E6C27_scaffold18G001980 [Cucumis melo var. makuwa]1.9e-1753.44Show/hide
Query:  NHRKVLSQRNLPFSWEKNPARSKFYFRDFQALA--LQPPPSSTYHRGD-SEFD--VVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFV
        +HRKVLSQ N+    +  P  SK  FRDFQALA  L    SSTY   D S+FD  V SKIPPPP R  P +  +A  + DDPFL+AYKECTKSVKN    
Subjt:  NHRKVLSQRNLPFSWEKNPARSKFYFRDFQALA--LQPPPSSTYHRGD-SEFD--VVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFV

Query:  ERGNKGAAAVSKKSKLF--GFSCKSIHSCEI
          G      V KKSK F   FSCK+I SC+I
Subjt:  ERGNKGAAAVSKKSKLF--GFSCKSIHSCEI

KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2355.3Show/hide
Query:  MNHRKVLSQRNLPFSWEKNPARS-KFYFRDFQALALQPPPSSTYHRGDSEFDVVSKI-PPPPYRQQPRSIRNASAK----EDDPFLMAYKECTKSVKNGS
        M+H+K+ S+ N+PFSWE+ P  S K  F+D     +QP P  + H  DSEFD V KI PPPP R QP S+RNAS K    E+DPFL AYKECTKSVK G 
Subjt:  MNHRKVLSQRNLPFSWEKNPARS-KFYFRDFQALALQPPPSSTYHRGDSEFDVVSKI-PPPPYRQQPRSIRNASAK----EDDPFLMAYKECTKSVKNGS

Query:  FVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR
                   V+KKSKLFGF CKS  SCEIR
Subjt:  FVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR

KAG6604109.1 hypothetical protein SDJN03_04718, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5498.18Show/hide
Query:  MNHRKVLSQRNLPFSWEKNPARSKFYFRDFQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFVERGN
        MNHRKVLSQRNLPFSWE+NPARSKFYFRDFQALALQP PSSTYHRGDSEFDVVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFVERGN
Subjt:  MNHRKVLSQRNLPFSWEKNPARSKFYFRDFQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFVERGN

Query:  KGAAAVSKKS
        KGAAAVSKKS
Subjt:  KGAAAVSKKS

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]9.9e-1956.82Show/hide
Query:  HRKVLSQRN-LPFSWEKNPARSKFYFRDFQALALQPPPSSTYHR--GDSEFD--VVSKIPPPPYRQQPRSIRNASAKE--DDPFLMAYKECTKSVKNGSF
        HRK+LSQ N +P   +  P  SK  FRDFQALAL    SS Y    G S+FD  V SKIPPPP R  P      SAKE  DDPFL+AYKECTKSVKN   
Subjt:  HRKVLSQRN-LPFSWEKNPARSKFYFRDFQALALQPPPSSTYHR--GDSEFD--VVSKIPPPPYRQQPRSIRNASAKE--DDPFLMAYKECTKSVKNGSF

Query:  VERGNKGAAAVSKKSK-LFG-FSCKSIHSCEI
          +G      V KKSK LFG FSCK+IHSC+I
Subjt:  VERGNKGAAAVSKKSK-LFG-FSCKSIHSCEI

OMO70852.1 hypothetical protein COLO4_28461 [Corchorus olitorius]6.2e-1342.65Show/hide
Query:  MNHRKVLSQRNLPFSWEKNPARSKFYFRD-------FQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQP---RSIRNASAKEDDPFLMAYKECTKSV
        MN  KV SQ N+PFSWE  P   K   +D        Q L   P P  T     S     +KIPPPP   QP    S R    K DDPFL AYKECTKS 
Subjt:  MNHRKVLSQRNLPFSWEKNPARSKFYFRD-------FQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQP---RSIRNASAKEDDPFLMAYKECTKSV

Query:  KNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR
          G   +  N G +   KK  +F FSCK   SC +R
Subjt:  KNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR

TrEMBL top hitse value%identityAlignment
A0A0A0KGJ1 Uncharacterized protein4.8e-1956.82Show/hide
Query:  HRKVLSQRN-LPFSWEKNPARSKFYFRDFQALALQPPPSSTYHR--GDSEFD--VVSKIPPPPYRQQPRSIRNASAKE--DDPFLMAYKECTKSVKNGSF
        HRK+LSQ N +P   +  P  SK  FRDFQALAL    SS Y    G S+FD  V SKIPPPP R  P      SAKE  DDPFL+AYKECTKSVKN   
Subjt:  HRKVLSQRN-LPFSWEKNPARSKFYFRDFQALALQPPPSSTYHR--GDSEFD--VVSKIPPPPYRQQPRSIRNASAKE--DDPFLMAYKECTKSVKNGSF

Query:  VERGNKGAAAVSKKSK-LFG-FSCKSIHSCEI
          +G      V KKSK LFG FSCK+IHSC+I
Subjt:  VERGNKGAAAVSKKSK-LFG-FSCKSIHSCEI

A0A1R3HKK6 Uncharacterized protein3.0e-1342.65Show/hide
Query:  MNHRKVLSQRNLPFSWEKNPARSKFYFRD-------FQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQP---RSIRNASAKEDDPFLMAYKECTKSV
        MN  KV SQ N+PFSWE  P   K   +D        Q L   P P  T     S     +KIPPPP   QP    S R    K DDPFL AYKECTKS 
Subjt:  MNHRKVLSQRNLPFSWEKNPARSKFYFRD-------FQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQP---RSIRNASAKEDDPFLMAYKECTKSV

Query:  KNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR
          G   +  N G +   KK  +F FSCK   SC +R
Subjt:  KNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR

A0A5D3CLL9 Uncharacterized protein9.0e-1853.44Show/hide
Query:  NHRKVLSQRNLPFSWEKNPARSKFYFRDFQALA--LQPPPSSTYHRGD-SEFD--VVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFV
        +HRKVLSQ N+    +  P  SK  FRDFQALA  L    SSTY   D S+FD  V SKIPPPP R  P +  +A  + DDPFL+AYKECTKSVKN    
Subjt:  NHRKVLSQRNLPFSWEKNPARSKFYFRDFQALA--LQPPPSSTYHRGD-SEFD--VVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFV

Query:  ERGNKGAAAVSKKSKLF--GFSCKSIHSCEI
          G      V KKSK F   FSCK+I SC+I
Subjt:  ERGNKGAAAVSKKSKLF--GFSCKSIHSCEI

F6I2E0 Uncharacterized protein1.5e-1240.71Show/hide
Query:  MNHRKVLSQRNLPFSWEKNPARSKFYFRDFQA----------LALQPPPSSTYHRGDSEFDVVS-KIPPPPYRQQPRSIRNAS----AKEDDPFLMAYKE
        M+HRKV SQ ++PFSWE +P  SK   ++  A          L   PPPS        +  + + KIP PP   QP   R +S     +E+DPFL AYKE
Subjt:  MNHRKVLSQRNLPFSWEKNPARSKFYFRDFQA----------LALQPPPSSTYHRGDSEFDVVS-KIPPPPYRQQPRSIRNAS----AKEDDPFLMAYKE

Query:  CTKSVKNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEI
        CTKSV++    +   KG     +K K F FSCK  HSCE+
Subjt:  CTKSVKNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEI

W9RVC8 Uncharacterized protein1.9e-1242.95Show/hide
Query:  MNHRKVLSQRNLPFSWEKNPARSKFYFRD------FQALALQPPPSSTYHRGDSEFDVVS-------------KIPPPPYRQQPRSIRNASAK----EDD
        M HRKV SQ ++PF WE  P  SK   +D       QAL L    SS   +   +F ++S             KIPPPP   QP S R++SAK    ++D
Subjt:  MNHRKVLSQRNLPFSWEKNPARSKFYFRD------FQALALQPPPSSTYHRGDSEFDVVS-------------KIPPPPYRQQPRSIRNASAK----EDD

Query:  PFLMAYKECTKSVKNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR
        PFL+AYKECTK VK G   E  NK  + V  KS    FSCK  +SCE+R
Subjt:  PFLMAYKECTKSVKNGSFVERGNKGAAAVSKKSKLFGFSCKSIHSCEIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACAGAAAAGTCCTTTCCCAACGAAATCTTCCCTTCTCATGGGAGAAAAACCCCGCCCGTTCCAAATTCTACTTCCGGGATTTTCAAGCCCTTGCCTTACAGCC
CCCGCCGTCGTCCACCTACCACAGAGGAGACTCTGAATTCGACGTCGTTTCTAAGATTCCTCCGCCGCCGTACCGGCAGCAGCCCCGTTCAATTAGAAACGCCTCCGCCA
AGGAAGACGACCCTTTTCTCATGGCCTACAAGGAGTGCACTAAAAGTGTAAAAAATGGAAGCTTTGTGGAGAGAGGAAACAAAGGAGCCGCCGCCGTTTCGAAGAAGAGT
AAGTTGTTTGGTTTTTCTTGCAAGAGCATTCATTCTTGTGAAATTAGATCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCACAGAAAAGTCCTTTCCCAACGAAATCTTCCCTTCTCATGGGAGAAAAACCCCGCCCGTTCCAAATTCTACTTCCGGGATTTTCAAGCCCTTGCCTTACAGCC
CCCGCCGTCGTCCACCTACCACAGAGGAGACTCTGAATTCGACGTCGTTTCTAAGATTCCTCCGCCGCCGTACCGGCAGCAGCCCCGTTCAATTAGAAACGCCTCCGCCA
AGGAAGACGACCCTTTTCTCATGGCCTACAAGGAGTGCACTAAAAGTGTAAAAAATGGAAGCTTTGTGGAGAGAGGAAACAAAGGAGCCGCCGCCGTTTCGAAGAAGAGT
AAGTTGTTTGGTTTTTCTTGCAAGAGCATTCATTCTTGTGAAATTAGATCAAAATAA
Protein sequenceShow/hide protein sequence
MNHRKVLSQRNLPFSWEKNPARSKFYFRDFQALALQPPPSSTYHRGDSEFDVVSKIPPPPYRQQPRSIRNASAKEDDPFLMAYKECTKSVKNGSFVERGNKGAAAVSKKS
KLFGFSCKSIHSCEIRSK