CuGenDBv2

Gene ID	CmoCh03G009630
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Formamidase
Genome location	Cmo_Chr03:7223785..7224415
RNA-Seq Expression	CmoCh03G009630
Synteny	CmoCh03G009630
Gene Ontology terms	GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (molecular function)
InterPro domains	IPR004304 - Acetamidase/Formamidase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604137.1 Formamidase, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-35

97.3

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS
        MGDYGPRLVVSVDVKKNPWQQK PLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSC+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS

KAG7034299.1 Formamidase, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-35

97.3

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS
        MGDYGPRLVVSVDVKKNPWQQK PLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSC+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS

XP_022950050.1 uncharacterized protein LOC111453252 isoform X2 [Cucurbita moschata]

1.1e-35

98.65

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS
        MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSC+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS

XP_022977497.1 uncharacterized protein LOC111477820 isoform X2 [Cucurbita maxima]

1.7e-34

100

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

XP_023543770.1 uncharacterized protein LOC111803545 isoform X2 [Cucurbita pepo subsp. pepo]

1.4e-33

98.61

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        MGDYG RLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B102 formamidase-like isoform X2

3.6e-27

77.03

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Query:  MGD--YGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        MGD  YGPR+VV +D+KK PWQQK PLHNRWHPEIPP AEVKV E F++EMVDFSGG ITKDYSA+D+KH DNS
Subjt:  MGD--YGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

A0A2N9F6Q1 Uncharacterized protein

2.8e-27

79.17

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        M  YGPRL+V +DVKK PW+QKLPLHNRWHP IPPVAEVKV E+F+VEMVDFSGG ITKDYSAED+KHA+ S
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

A0A5D3CLP5 Formamidase-like isoform X2

3.6e-27

77.03

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Query:  MGD--YGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        MGD  YGPR+VV +D+KK PWQQK PLHNRWHPEIPP AEVKV E F++EMVDFSGG ITKDYSA+D+KH DNS
Subjt:  MGD--YGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

A0A6J1GEJ7 uncharacterized protein LOC111453252 isoform X2

5.5e-36

98.65

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS
        MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSC+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS

A0A6J1IIP2 uncharacterized protein LOC111477820 isoform X2

8.0e-35

100

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

SwissProt top hits

e value

%identity

Alignment

Q07838 Acetamidase

2.1e-08

43.08

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Query:  PRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHAD
        P +V SVD  K+   Q +P HNRWHP+IP  A VK    F++E  +++ G I  + SA DV+  D
Subjt:  PRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHAD

Q50228 Formamidase

1.6e-11

43.75

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Query:  RLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHAD
        + +V +D+ K PW+Q   +HNRWHP++P +A VK  + F+VE +D++GG I  + SA DV+  D
Subjt:  RLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHAD

Q9URY7 Putative formamidase C869.04

2.7e-11

47.69

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Query:  PRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHAD
        PR +V VD+ K  W+Q   LHNRWHP+IP    +   E  K+E +D++GG I  D SAED+K+ D
Subjt:  PRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHAD

Arabidopsis top hits

e value

%identity

Alignment

AT4G37550.1 Acetamidase/Formamidase family protein

2.9e-21

63.24

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKH
        M    PR+VV VD+KK PWQQ  PLHNRWHPEIPPVAEVK  E F+VEM+D  GG I  + SA D+K+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKH

AT4G37550.2 Acetamidase/Formamidase family protein

2.9e-21

63.24

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKH
        M    PR+VV VD+KK PWQQ  PLHNRWHPEIPPVAEVK  E F+VEM+D  GG I  + SA D+K+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKH

AT4G37550.3 Acetamidase/Formamidase family protein

2.9e-21

63.24

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKH
        M    PR+VV VD+KK PWQQ  PLHNRWHPEIPPVAEVK  E F+VEM+D  GG I  + SA D+K+
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKH

AT4G37560.1 Acetamidase/Formamidase family protein

1.5e-22

65.28

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Query:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS
        M    PR+VV VD+KK PWQQ  PLHNRWHPEIP VAEVK  ELF+VEMVD++GGA+ +D SA D+K  D S
Subjt:  MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNS

Sequences

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CDS sequence

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ATGGGTGATTATGGTCCAAGGCTAGTGGTGTCTGTAGATGTGAAGAAGAACCCATGGCAACAGAAACTTCCACTTCACAACCGGTGGCACCCGGAGATACCGCCGGTGGC
GGAAGTCAAGGTGGATGAGCTCTTCAAAGTCGAAATGGTGGATTTTAGTGGCGGAGCAATCACCAAAGACTACTCTGCTGAAGACGTTAAACATGCTGACAATTCCTGTT
CATAA

mRNA sequence

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CCAAGGAAAAGATAATGATCAATCCATGTTGTCTCATTCCGAGATTCAAAAGCTCCATTACCTTGTAATTCAACTGCCTAAAGAAGAACGAGGAGGAAGAAGAAGGATAT
GGGTGATTATGGTCCAAGGCTAGTGGTGTCTGTAGATGTGAAGAAGAACCCATGGCAACAGAAACTTCCACTTCACAACCGGTGGCACCCGGAGATACCGCCGGTGGCGG
AAGTCAAGGTGGATGAGCTCTTCAAAGTCGAAATGGTGGATTTTAGTGGCGGAGCAATCACCAAAGACTACTCTGCTGAAGACGTTAAACATGCTGACAATTCCTGTTCA
TAA

Protein sequence

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MGDYGPRLVVSVDVKKNPWQQKLPLHNRWHPEIPPVAEVKVDELFKVEMVDFSGGAITKDYSAEDVKHADNSCS

CmoCh03G009630 (gene) of Cucurbita moschata (Rifu) v1 genome