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CmoCh03G010670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G010670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1
Genome locationCmo_Chr03:7946648..7947803
RNA-Seq ExpressionCmoCh03G010670
SyntenyCmoCh03G010670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604268.1 hypothetical protein SDJN03_04877, partial [Cucurbita argyrosperma subsp. sororia]2.0e-8698.9Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLE+GTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDEN PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

KAG7034425.1 hypothetical protein SDJN02_04154 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-8698.9Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAP PAPEPSPEKTVPETKLE+GTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

XP_022949635.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucurbita moschata]1.1e-87100Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

XP_022979013.1 early nodulin-75-like [Cucurbita maxima]7.3e-7691.16Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLK DSG+APAPAPAPE SPEKTV ETKLE+G+S AQGTEIVDEDKV SKPRCLSHLF+DQEKTAAADPSEKEEIP E+EKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKP ETNPPEPEPPVSDSVTENA PIESN KVEV DEN+PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

XP_023543402.1 early nodulin-75-like [Cucurbita pepo subsp. pepo]4.1e-7993.37Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLK DSGDAPAPAPAPE S EKTVPETKLE+G+SDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPS KEEIPPE+EKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTE+KPSETNPPEPEPPVSDSVTENA PIESN KVEV DEN+PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein1.1e-2152.69Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSKPRCLSHLF-----NDQEKTAAADPSEKEEIPPESEKKMNP
        MGACATKPK LK +SGDAP   PA          ETK  D   D +  EI VD+DKVDSKP  L+ LF      ++EKT  ADP EK+            
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSKPRCLSHLF-----NDQEKTAAADPSEKEEIPPESEKKMNP

Query:  PPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESN-----IKVEVPDENKPPPEKTESPEKPTETEEPV
               ET PPETEK+INP  EEKPSE NP  PEP VSDSVTEN    E       IKVEV  EN  PPEKTES EKPTETE+ V
Subjt:  PPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESN-----IKVEVPDENKPPPEKTESPEKPTETEEPV

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.1e-2149.28Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMN
        MGACATKPK +K +SG+AP   PA          ETK  D   D +  EI VD+DKVDSKPR LS+LF D      +EKT  ADP EK+           
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMN

Query:  PPPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEE
                ET PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+
Subjt:  PPPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEE

Query:  PVIKVIS
         V KVI+
Subjt:  PVIKVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.1e-2149.28Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMN
        MGACATKPK +K +SG+AP   PA          ETK  D   D +  EI VD+DKVDSKPR LS+LF D      +EKT  ADP EK+           
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMN

Query:  PPPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEE
                ET PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+
Subjt:  PPPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEE

Query:  PVIKVIS
         V KVI+
Subjt:  PVIKVIS

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 15.2e-88100Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

A0A6J1IUX1 early nodulin-75-like3.5e-7691.16Show/hide
Query:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLK DSG+APAPAPAPE SPEKTV ETKLE+G+S AQGTEIVDEDKV SKPRCLSHLF+DQEKTAAADPSEKEEIP E+EKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKP ETNPPEPEPPVSDSVTENA PIESN KVEV DEN+PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCTGTGCGACGAAGCCAAAGGTTCTCAAGCCTGACTCCGGCGACGCTCCGGCTCCGGCTCCGGCGCCAGAGCCTTCTCCGGAGAAGACGGTGCCCGAA
ACTAAACTGGAGGATGGCACCAGCGACGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGATTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAATGATCAG
GAGAAGACAGCAGCAGCGGATCCATCGGAGAAGGAAGAGATCCCACCGGAATCTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCA
CCGGAAACAGAGAAGAAAATAAACCCTCCGACGGAGGAGAAGCCGTCTGAGACCAACCCACCGGAGCCGGAGCCACCAGTTTCCGACTCTGTTACAGAAAATGCA
GGACCAATTGAAAGCAATATCAAAGTCGAAGTTCCCGATGAGAACAAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTG
ATCAAAGTAATCAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
CCAAGTTGCCGAAATCCCTGTTCCCCTCTCTCTCTATAAATCATTACCCTCATTTTCTCTCTCATACACTTTCATTCACCCACAGACACACAGAAGGATGGGAGC
CTGTGCGACGAAGCCAAAGGTTCTCAAGCCTGACTCCGGCGACGCTCCGGCTCCGGCTCCGGCGCCAGAGCCTTCTCCGGAGAAGACGGTGCCCGAAACTAAACT
GGAGGATGGCACCAGCGACGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGATTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAATGATCAGGAGAAGAC
AGCAGCAGCGGATCCATCGGAGAAGGAAGAGATCCCACCGGAATCTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCACCGGAAAC
AGAGAAGAAAATAAACCCTCCGACGGAGGAGAAGCCGTCTGAGACCAACCCACCGGAGCCGGAGCCACCAGTTTCCGACTCTGTTACAGAAAATGCAGGACCAAT
TGAAAGCAATATCAAAGTCGAAGTTCCCGATGAGAACAAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTGATCAAAGT
AATCAGCAATTAAGAAAAGCTTGGTGTGTCACTTTTTTTTCTTCCCTTTTTTGAGATAAACCGAGTAATAATAAATCAGTCTTCTGAGAATTATTGAATCTGAAG
CCCATCAGCCCAGTTAGAATTCCGGCCCAATTTCGTCCTCGGCCCAATTTTTCGCCCACTTGCGCATCGTCGGCCCAAATATAAAGCCCATAGTCGCAGCCCATC
AGCCCACGACTCAGCGACTCGCGACTTAACCCGTGGTCGACCTGACAGCCGACCCGACAGCCGACCCGAAGCCGTATTCTCGTGTGCGACGCGCGTGCGGCTCAA
ACCCCT
Protein sequenceShow/hide protein sequence
MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKPSETIP
PETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN