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CmoCh03G011660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G011660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzf-RVT domain-containing protein
Genome locationCmo_Chr03:9174128..9177795
RNA-Seq ExpressionCmoCh03G011660
SyntenyCmoCh03G011660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4355008.1 hypothetical protein G4B88_008483 [Cannabis sativa]6.7e-0475Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPL
        MYP VFLPA+TS +VVFPAPLTP +AV+TPGL  PL
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPL
PKA63440.1 hypothetical protein AXF42_Ash005335 [Apostasia shenzhenica]4.2e-0683.78Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
        MYPPVFLPA TSI+VV PAPLTP SAV+TPGL APLT
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
TrEMBL top hitse value%identityAlignment
A0A0A8XWR3 Uncharacterized protein2.0e-0686.49Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
        MYPPVFLPA TSIRVV PAPLTP SAV TPGLK PLT
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
A0A2I0B6N5 Uncharacterized protein2.0e-0683.78Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
        MYPPVFLPA TSI+VV PAPLTP SAV+TPGL APLT
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
A0A2P2JV06 Uncharacterized protein4.1e-0786.49Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
        +YPPVFLPA TSIRVVFPAPLTP  AV+TPGLKAPLT
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
A0A7N0SXV9 Uncharacterized protein2.5e-0472.97Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
        +YPPVFLPA+TSI VVFPAP+ PTSAV+TPG   P T
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
T1LFU3 Uncharacterized protein1.8e-0789.19Show/hide
Query:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
        MYPPVFLPAKTSIRVVFPAPLTP +AV TPGLK PLT
Subjt:  MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCCTCCTGTCTTTCTTCCAGCTAAGACGTCCATTAGAGTGGTCTTTCCAGCCCCACTGACACCTACGAGTGCTGTCAAGACACCAGGTCTGAAAGCTCCA
CTGACATCCCGCACAATGGCAGCTCTTGAATCGCCCAAAGCTGAATTTGGTTTGTCAGATGGGTCAGTAACAGCAAAAAAGAAGAGATTTCATGGAAAATTCTTG
AATGGAAACCAGAAGATTTGGCTTACGGTTGAGGAACGCAGCCTGACGATGGTCAAGGCTAGTTCTGCCATTCCATTAAACATCATATTGATTAAGCTAAAGAAC
AGTGCTCCAAAGAACTTTCCACCTCCTTCCACAGTGCCCACTTTCATTTCTGTCCTGAAGAACACCGTCATTTTTCCCTGCAAGTGCTCGCAGCAATGTCGTCTT
CCCAGAACTCGGAGGACCCAGAAGAAGAGTCATCCTACATTTTTACATCGATCTCACCAAATGGGTATCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATCCTCCTGTCTTTCTTCCAGCTAAGACGTCCATTAGAGTGGTCTTTCCAGCCCCACTGACACCTACGAGTGCTGTCAAGACACCAGGTCTGAAAGCTCCA
CTGACATCCCGCACAATGGCAGCTCTTGAATCGCCCAAAGCTGAATTTGGTTTGTCAGATGGGTCAGTAACAGCAAAAAAGAAGAGATTTCATGGAAAATTCTTG
AATGGAAACCAGAAGATTTGGCTTACGGTTGAGGAACGCAGCCTGACGATGGTCAAGGCTAGTTCTGCCATTCCATTAAACATCATATTGATTAAGCTAAAGAAC
AGTGCTCCAAAGAACTTTCCACCTCCTTCCACAGTGCCCACTTTCATTTCTGTCCTGAAGAACACCGTCATTTTTCCCTGCAAGTGCTCGCAGCAATGTCGTCTT
CCCAGAACTCGGAGGACCCAGAAGAAGAGTCATCCTACATTTTTACATCGATCTCACCAAATGGGTATCACCTAA
Protein sequenceShow/hide protein sequence
MYPPVFLPAKTSIRVVFPAPLTPTSAVKTPGLKAPLTSRTMAALESPKAEFGLSDGSVTAKKKRFHGKFLNGNQKIWLTVEERSLTMVKASSAIPLNIILIKLKN
SAPKNFPPPSTVPTFISVLKNTVIFPCKCSQQCRLPRTRRTQKKSHPTFLHRSHQMGIT