; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh03G011680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G011680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRAB6-interacting golgin
Genome locationCmo_Chr03:9181010..9182249
RNA-Seq ExpressionCmoCh03G011680
SyntenyCmoCh03G011680
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022925875.1 uncharacterized protein LOC111433155 [Cucurbita moschata]3.2e-78100Show/hide
Query:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
        MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
Subjt:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN

Query:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
        KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
Subjt:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS

XP_022972692.1 uncharacterized protein KIAA1211-like [Cucurbita maxima]2.5e-6285.45Show/hide
Query:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL
        Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMR E+QQKLQARLGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +
Subjt:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL

Query:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT
        NKELKPLGQ CQKKEKEYKDALDAFNEKN+EKV  +SKLMEMVGESER+RL+RLEELSKHVDN +
Subjt:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT

XP_022979025.1 uncharacterized protein LOC111478791 [Cucurbita maxima]7.8e-7798.79Show/hide
Query:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
        MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
Subjt:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN

Query:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
        KELKPLGQICQKKEKEYKDALDAFNEKNNEKV CISKLMEMVGESERVRLKRLEELSKHVDNN S
Subjt:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS

XP_023517191.1 uncharacterized protein KIAA1211-like [Cucurbita pepo subsp. pepo]1.4e-6285.45Show/hide
Query:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL
        Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMRTE+QQKLQARLGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +
Subjt:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL

Query:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT
        NKELKPLGQ CQK+EKEYKDALDAFNEKN+EKV  +SKLMEMVGESER+RL+RLEELSKHVDN +
Subjt:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT

XP_023543803.1 uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo]1.6e-7799.39Show/hide
Query:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
        MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
Subjt:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN

Query:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
        KELKPLGQICQKKEKEYKDALDAFNEKNNEKV CISKLMEMVGESERVRLKRLEELSKHVDNNTS
Subjt:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS

TrEMBL top hitse value%identityAlignment
A0A1S3CIS0 RAB6-interacting golgin1.2e-6283.03Show/hide
Query:  MQNEQN-PQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL
        MQ +QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RLGRV+EESRRL+S+REELE I GDP RKEIGQIRK+ID L
Subjt:  MQNEQN-PQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL

Query:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT
        NKELKPLG  CQKKEKEYKDALD+FNEKNNEKV  ISKLMEMVGESE++RLKRLEELSKHVDN +
Subjt:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT

A0A6J1EJF7 RAB6-interacting golgin1.5e-78100Show/hide
Query:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
        MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
Subjt:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN

Query:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
        KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
Subjt:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS

A0A6J1HDL2 RAB6-interacting golgin2.0e-6284.85Show/hide
Query:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL
        Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMRTE+QQKLQARLGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +
Subjt:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL

Query:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT
        NKELKPLGQ CQK+EKEYKDAL+AFNEKN+EKV  +SKLMEMVGESER+RL+RLEELSKHVDN +
Subjt:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT

A0A6J1I5J6 RAB6-interacting golgin1.2e-6285.45Show/hide
Query:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL
        Q EQNP  QQLQ+MLQNSGN SFSSK+DEEMSKSALSAFREKEEEIERMR E+QQKLQARLGRVEEE+RRLASIREELE I  DP RKEIGQIRKRID +
Subjt:  QNEQNP--QQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL

Query:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT
        NKELKPLGQ CQKKEKEYKDALDAFNEKN+EKV  +SKLMEMVGESER+RL+RLEELSKHVDN +
Subjt:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT

A0A6J1IS07 RAB6-interacting golgin3.8e-7798.79Show/hide
Query:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
        MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN
Subjt:  MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLN

Query:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS
        KELKPLGQICQKKEKEYKDALDAFNEKNNEKV CISKLMEMVGESERVRLKRLEELSKHVDNN S
Subjt:  KELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)1.3e-4260.12Show/hide
Query:  QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNK
        Q  QQ   M+ ++G+LSFS   S+EDEEM++SALSAFR KE+EIE+ R E+++++QA+LGRVE+E++RL++IREELE +  DP RKE+  +RK+ID++NK
Subjt:  QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNK

Query:  ELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEM---VGESERVRLKRLEELSKHVD
        ELKPLG   QKKE+EYK+ALD FNEKN EKV  I+KLMEM   VGESE++R+ +LEELSK ++
Subjt:  ELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEM---VGESERVRLKRLEELSKHVD

AT2G36410.2 Family of unknown function (DUF662)7.1e-4460.62Show/hide
Query:  QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNK
        Q  QQ   M+ ++G+LSFS   S+EDEEM++SALSAFR KE+EIE+ R E+++++QA+LGRVE+E++RL++IREELE +  DP RKE+  +RK+ID++NK
Subjt:  QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNK

Query:  ELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVD
        ELKPLG   QKKE+EYK+ALD FNEKN EKV  I+KLME+VGESE++R+ +LEELSK ++
Subjt:  ELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVD

AT2G36410.3 Family of unknown function (DUF662)1.0e-4260Show/hide
Query:  QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNK
        Q  QQ   M+ ++G+LSFS   S+EDEEM++SALSAFR KE+EIE+ R E+++++QA+LGRVE+E++RL++IREELE +  DP RKE+  +RK+ID++NK
Subjt:  QNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNK

Query:  ELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVD
        ELKPLG   QKK  EYK+ALD FNEKN EKV  I+KLME+VGESE++R+ +LEELSK ++
Subjt:  ELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVD

AT3G09980.1 Family of unknown function (DUF662)1.5e-4664.52Show/hide
Query:  QVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLG
        Q+  Q SG++SFS   SKEDEEMS++ALSAFR KEEEIE+ + E+++++QA+LGRVEEE++RLA IREELEG+  DP RKE+  +RK+ID++NKELKPLG
Subjt:  QVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLG

Query:  QICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDN
           QKKE+EYK+AL+AFNEKN EKV  I++LME+VGESE++R+K+LEELSK++D+
Subjt:  QICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDN

AT3G52920.2 Family of unknown function (DUF662)9.3e-4461.21Show/hide
Query:  NEQNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL
        NE   Q  Q M+    +LSFS   SKEDEEM++SALSAFR KE+EIE+ + E++++++A+LGRVEEE+RRLASIREELE +  DP RKE+  +RK+ID++
Subjt:  NEQNPQQLQVMLQNSGNLSFS---SKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTL

Query:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT
        NKELKPLG   QKKE+EYK+ALD FNEKN EKV  I+KLME+VGESE++RLK+L+ELS+ +D  +
Subjt:  NKELKPLGQICQKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAACGAGCAGAATCCGCAGCAGCTTCAAGTAATGTTGCAGAATTCTGGAAATTTGAGTTTCAGTAGCAAAGAAGATGAAGAGATGTCCAAATCGGCGCTTTCGGC
TTTTAGGGAAAAGGAGGAGGAGATTGAGCGGATGAGGACTGAACTTCAGCAAAAACTTCAAGCTCGACTCGGCCGAGTTGAGGAAGAATCAAGGCGTTTGGCCTCCATTC
GAGAGGAACTTGAAGGCATAGATGGAGATCCAACGAGGAAGGAAATTGGACAAATCCGTAAGAGAATTGATACGCTAAACAAGGAATTAAAGCCTCTTGGACAAATATGC
CAAAAGAAGGAGAAAGAGTACAAAGATGCCCTCGATGCTTTCAATGAAAAGAACAACGAGAAAGTACTGTGTATATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAG
GGTGAGGCTGAAGAGGTTGGAAGAACTGAGTAAGCATGTGGATAACAACACTTCCTAA
mRNA sequenceShow/hide mRNA sequence
GTCAGAATTTGAAGATCCATTGTAAAAGCAAAAGAAAAAAAAAATAAAAGTAAAGAAAAGCAGCGGCGTAAGAAAAGAAAGGGGAGGAGAGGAGAGGGAATTCGTTCATT
CATTCATTCATACAAGCAAGAACGGAAGCGCATCCTCTGGAGGGAAAAAGGAAAAATCAAGAGATGCAGAACGAGCAGAATCCGCAGCAGCTTCAAGTAATGTTGCAGAA
TTCTGGAAATTTGAGTTTCAGTAGCAAAGAAGATGAAGAGATGTCCAAATCGGCGCTTTCGGCTTTTAGGGAAAAGGAGGAGGAGATTGAGCGGATGAGGACTGAACTTC
AGCAAAAACTTCAAGCTCGACTCGGCCGAGTTGAGGAAGAATCAAGGCGTTTGGCCTCCATTCGAGAGGAACTTGAAGGCATAGATGGAGATCCAACGAGGAAGGAAATT
GGACAAATCCGTAAGAGAATTGATACGCTAAACAAGGAATTAAAGCCTCTTGGACAAATATGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTCGATGCTTTCAATGA
AAAGAACAACGAGAAAGTACTGTGTATATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAGGGTGAGGCTGAAGAGGTTGGAAGAACTGAGTAAGCATGTGGATAACA
ACACTTCCTAATTCAATTCCCCTGAATTAATTCCTCTGTTTCTGTTTTTGTTAGTTTTCTTCATTCTTAAACTTTTAATTTGTTTATGTCTGTTTTGAGTGATTTGTTTC
TCTTTTTATTTCATTTAGGGTGGCTCACATATATATATGTATGTATGTATGTATTGCTTTTAAC
Protein sequenceShow/hide protein sequence
MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARLGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQIC
QKKEKEYKDALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNTS