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CmoCh03G012130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G012130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncell division cycle protein 48 homolog
Genome locationCmo_Chr03:9424241..9425252
RNA-Seq ExpressionCmoCh03G012130
SyntenyCmoCh03G012130
Gene Ontology termsGO:0030433 - ubiquitin-dependent ERAD pathway (biological process)
GO:0030970 - retrograde protein transport, ER to cytosol (biological process)
GO:0051228 - mitotic spindle disassembly (biological process)
GO:0051301 - cell division (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0097352 - autophagosome maturation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0009536 - plastid (cellular component)
GO:0034098 - VCP-NPL4-UFD1 AAA ATPase complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
InterPro domainsIPR009010 - Aspartate decarboxylase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604405.1 Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia]3.3e-20100Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

KAG7034556.1 Cell division cycle protein 48-like protein [Cucurbita argyrosperma subsp. argyrosperma]3.3e-20100Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

TQD71837.1 hypothetical protein C1H46_042619 [Malus baccata]7.4e-2072.94Show/hide
Query:  LSSAPPSTWRIKLNPPMRKPYLQFPRSPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKVF
        L SAPPST   K+        L F    KG KRDFSTA LERKKAA+RLVVD+A NDDNSVVALHPDTMEKLQLFRGDTILIKVF
Subjt:  LSSAPPSTWRIKLNPPMRKPYLQFPRSPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKVF

XP_022926084.1 cell division cycle protein 48 homolog [Cucurbita moschata]3.3e-20100Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

XP_022978798.1 cell division cycle protein 48 homolog [Cucurbita maxima]3.3e-20100Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

TrEMBL top hitse value%identityAlignment
A0A164YFQ6 Uncharacterized protein1.0e-1994.64Show/hide
Query:  PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        PKG KRDFSTAILERKKAANRLVVDEA NDDNSVVALHP+TMEKLQLFRGDTILIK
Subjt:  PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

A0A200Q9B5 CDC488.0e-2092.86Show/hide
Query:  PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVV+LHP+TM+KLQLFRGDTIL+K
Subjt:  PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

A0A540KC77 Uncharacterized protein3.6e-2072.94Show/hide
Query:  LSSAPPSTWRIKLNPPMRKPYLQFPRSPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKVF
        L SAPPST   K+        L F    KG KRDFSTA LERKKAA+RLVVD+A NDDNSVVALHPDTMEKLQLFRGDTILIKVF
Subjt:  LSSAPPSTWRIKLNPPMRKPYLQFPRSPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKVF

A0A6J1EE16 cell division cycle protein 48 homolog1.6e-20100Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

A0A6J1IUB0 cell division cycle protein 48 homolog1.6e-20100Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

SwissProt top hitse value%identityAlignment
P54609 Cell division control protein 48 homolog A3.2e-1882.46Show/hide
Query:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        S   +K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGDTILIK
Subjt:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

P54774 Cell division cycle protein 48 homolog2.2e-1983.93Show/hide
Query:  PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        PK  K+DFSTAILERKK+ NRLVVDEA NDDNSVV +HP TMEKLQLFRGDTILIK
Subjt:  PKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

Q96372 Cell division cycle protein 48 homolog1.6e-2092.73Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        K AK+DFSTAILERKKAANRLVVDEA NDDNSVVALHP TMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

Q9LZF6 Cell division control protein 48 homolog E3.2e-1882.46Show/hide
Query:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        S    K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGDTILIK
Subjt:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

Q9SCN8 Cell division control protein 48 homolog D7.0e-2190.91Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KG K+DFSTAILE+KKAANRLVVDEA NDDNSVV+LHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

Arabidopsis top hitse value%identityAlignment
AT3G09840.1 cell division cycle 482.3e-1982.46Show/hide
Query:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        S   +K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGDTILIK
Subjt:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

AT3G53230.1 ATPase, AAA-type, CDC48 protein4.9e-2290.91Show/hide
Query:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        KG K+DFSTAILE+KKAANRLVVDEA NDDNSVV+LHPDTMEKLQLFRGDTILIK
Subjt:  KGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK

AT5G03340.1 ATPase, AAA-type, CDC48 protein2.3e-1982.46Show/hide
Query:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
        S    K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGDTILIK
Subjt:  SPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATATCTCAGCTTATCTGAGCTCAGATCTTTCCAGATACATTCCATAGCCATTTCCCTTCCATCTTGCAGTCGCCTGTTGTCTTCTGCTCCGCCATCGACATGGCG
AATCAAGCTGAATCCTCCGATGCGTAAGCCCTATCTCCAATTTCCCAGATCCCCTAAGGGTGCCAAGAGGGATTTTAGTACCGCGATTCTAGAGCGTAAGAAAGCCGCGA
ACCGGCTTGTTGTCGATGAGGCCACCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGACACTATGGAGAAGCTTCAACTCTTCCGTGGCGACACGATCTTGATTAAG
GTTTTTGAAAATGTTTTTGCCGGAAGTGATGTTGCAAAATTGTGTAGGATCGGGGAGCTTGAGGACGTGAATGAGTTACTTTATATAGCTCATGTTTCATTTCTGATCTG
CGAGTTTGAGATATGTGAATGTTATGAAAAGCCTAGAAGGCGAGTTTCGAAAATCTGTCAACATGTAATAAGTAAACTCACATATCAAATAGAGCTTCTAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATATCTCAGCTTATCTGAGCTCAGATCTTTCCAGATACATTCCATAGCCATTTCCCTTCCATCTTGCAGTCGCCTGTTGTCTTCTGCTCCGCCATCGACATGGCG
AATCAAGCTGAATCCTCCGATGCGTAAGCCCTATCTCCAATTTCCCAGATCCCCTAAGGGTGCCAAGAGGGATTTTAGTACCGCGATTCTAGAGCGTAAGAAAGCCGCGA
ACCGGCTTGTTGTCGATGAGGCCACCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGACACTATGGAGAAGCTTCAACTCTTCCGTGGCGACACGATCTTGATTAAG
GTTTTTGAAAATGTTTTTGCCGGAAGTGATGTTGCAAAATTGTGTAGGATCGGGGAGCTTGAGGACGTGAATGAGTTACTTTATATAGCTCATGTTTCATTTCTGATCTG
CGAGTTTGAGATATGTGAATGTTATGAAAAGCCTAGAAGGCGAGTTTCGAAAATCTGTCAACATGTAATAAGTAAACTCACATATCAAATAGAGCTTCTAGTATAA
Protein sequenceShow/hide protein sequence
MSYLSLSELRSFQIHSIAISLPSCSRLLSSAPPSTWRIKLNPPMRKPYLQFPRSPKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIK
VFENVFAGSDVAKLCRIGELEDVNELLYIAHVSFLICEFEICECYEKPRRRVSKICQHVISKLTYQIELLV