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CmoCh03G012780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh03G012780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTrigger factor like
Genome locationCmo_Chr03:9712576..9713262
RNA-Seq ExpressionCmoCh03G012780
SyntenyCmoCh03G012780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034606.1 hypothetical protein SDJN02_04336 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4598.92Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFYDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED
        MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKF DPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFYDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED

KAG8634527.1 hypothetical protein MANES_17G048550v8 [Manihot esculenta]2.4e-0683.33Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL
        MA+EL VLGCTGVV+FLHGANFFFHAL QH  VRSL
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL

PON37879.1 hypothetical protein PanWU01x14_317000 [Parasponia andersonii]2.4e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

PON61367.1 hypothetical protein TorRG33x02_281910 [Trema orientale]2.4e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

TYI04626.1 hypothetical protein ES332_A10G032800v1 [Gossypium tomentosum]2.4e-0678.38Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSLR
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

TrEMBL top hitse value%identityAlignment
A0A2P5AMV0 Uncharacterized protein1.2e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

A0A2P5CJZ9 Uncharacterized protein1.2e-0677.14Show/hide
Query:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        +EL +LGCTG+V+FLHGANFFFHAL QH T+RSLR
Subjt:  LELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

A0A5D2AZA5 Uncharacterized protein5.8e-0677.78Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSL
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL

A0A5D2NLM3 Uncharacterized protein1.2e-0678.38Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSLR
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR

A0A5J5TXY1 Uncharacterized protein5.8e-0677.78Show/hide
Query:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL
        M +EL VLGCTGVV+FLHGANFFFH L QH  VRSL
Subjt:  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGAGCTTCTCGTCTTGGGCTGCACCGGAGTTGTGATCTTCCTTCATGGAGCCAATTTCTTCTTCCACGCTCTCTGGCAGCATTTCACCGTCCGATCTCTCAG
GCATTTCCCTCTGTTTCTGAAGACGTCGCTCTATGGATCTTTCGGCGATTCCACTACCAAATTTTATGATCCACTAAACCTAACTTCTTGGGCCCGATTGGATGATAGAA
ATTGGAGAAGGCGAGCAGTGGATCATTTATTTGGAGACGAACAGCAGCAGATTGAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGAGCTTCTCGTCTTGGGCTGCACCGGAGTTGTGATCTTCCTTCATGGAGCCAATTTCTTCTTCCACGCTCTCTGGCAGCATTTCACCGTCCGATCTCTCAG
GCATTTCCCTCTGTTTCTGAAGACGTCGCTCTATGGATCTTTCGGCGATTCCACTACCAAATTTTATGATCCACTAAACCTAACTTCTTGGGCCCGATTGGATGATAGAA
ATTGGAGAAGGCGAGCAGTGGATCATTTATTTGGAGACGAACAGCAGCAGATTGAAGACTAAAGTATATATCCGACATTGTGGTTTAATATGTAATCTAGATTTACGCTG
TGCTGATGATGAAGAAGAAATAATCTAATTTACACGATACAGATTAAAATTCTATAGTCTATATAGTTCTTGCCATTCATCAACTTGTTTTTCATACTCCATTTCCATGT
TTATGGAGTTGATGCTCAACTAGTTTATGATTTATTGTAGAGAGAAGTAAATATTACACAATTTTGCGAAACTGGTTTTCTG
Protein sequenceShow/hide protein sequence
MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLRHFPLFLKTSLYGSFGDSTTKFYDPLNLTSWARLDDRNWRRRAVDHLFGDEQQQIED